RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 A0A1W2PQ45 241 aaPredicted RBP20.07■□□□□ 0.8
PRKCA-203ENST00000578063 A0A1W2PQY0 241 aa20.07■□□□□ 0.8
PRKCA-203ENST00000578063 ZC3H11AO75152 810 aaKnown RBP eCLIP20.07■□□□□ 0.84e-6■■■■■ 27.1
PRKCA-203ENST00000578063 C4BPAP04003 597 aaKnown RBP20.07■□□□□ 0.8
PRKCA-203ENST00000578063 STAG3L1P0CL83 205 aa20.07■□□□□ 0.8
PRKCA-203ENST00000578063 HOXA11P31270 313 aaPredicted RBP20.07■□□□□ 0.8
PRKCA-203ENST00000578063 JAM2P57087 298 aa20.07■□□□□ 0.8
PRKCA-203ENST00000578063 SLC27A1Q6PCB7 646 aa20.07■□□□□ 0.8
PRKCA-203ENST00000578063 CCAR2Q8N163 923 aaKnown RBP20.07■□□□□ 0.8
PRKCA-203ENST00000578063 TAS1R2Q8TE23 839 aa20.07■□□□□ 0.8
PRKCA-203ENST00000578063 ZNF516Q92618 1163 aa20.07■□□□□ 0.8
PRKCA-203ENST00000578063 CHP1Q99653 195 aa20.07■□□□□ 0.8
PRKCA-203ENST00000578063 PAK6Q9NQU5 681 aaPredicted RBP20.07■□□□□ 0.8
PRKCA-203ENST00000578063 AIPL1Q9NZN9 384 aa20.07■□□□□ 0.8
PRKCA-203ENST00000578063 DNAJC12Q9UKB3 198 aa20.07■□□□□ 0.8
PRKCA-203ENST00000578063 PHF24Q9UPV7 400 aa20.07■□□□□ 0.8
PRKCA-203ENST00000578063 NOD1Q9Y239 953 aa20.07■□□□□ 0.8
PRKCA-203ENST00000578063 CDY2AQ9Y6F7 541 aa20.07■□□□□ 0.8
PRKCA-203ENST00000578063 PTPRJQ12913 1337 aa20.06■□□□□ 0.8
PRKCA-203ENST00000578063 ZSCAN12O43309 604 aa20.06■□□□□ 0.8
PRKCA-203ENST00000578063 B4GALT4O60513 344 aa20.06■□□□□ 0.8
PRKCA-203ENST00000578063 PTK7Q13308 1070 aa20.06■□□□□ 0.8
PRKCA-203ENST00000578063 BIRC3Q13489 604 aa20.06■□□□□ 0.8
PRKCA-203ENST00000578063 LMBRD2Q68DH5 695 aaPredicted RBP20.06■□□□□ 0.8
PRKCA-203ENST00000578063 CCDC170Q8IYT3 715 aa20.06■□□□□ 0.8
PRKCA-203ENST00000578063 SEZ6LQ9BYH1 1024 aa20.06■□□□□ 0.8
PRKCA-203ENST00000578063 STK33Q9BYT3 514 aa20.06■□□□□ 0.8
PRKCA-203ENST00000578063 STARD7Q9NQZ5 370 aa20.06■□□□□ 0.8
PRKCA-203ENST00000578063 TRIP12Q14669 1992 aaPredicted RBP20.06■□□□□ 0.8
PRKCA-203ENST00000578063 A0A0U1RQG5 324 aaPredicted RBP20.05■□□□□ 0.8
PRKCA-203ENST00000578063 DNM1LO00429 736 aa20.05■□□□□ 0.8
PRKCA-203ENST00000578063 CYLC1P35663 651 aaPredicted RBP20.05■□□□□ 0.8
PRKCA-203ENST00000578063 GRM5P41594 1212 aa20.05■□□□□ 0.8
PRKCA-203ENST00000578063 OSTNP61366 133 aa20.05■□□□□ 0.8
PRKCA-203ENST00000578063 MTF1Q14872 753 aa20.05■□□□□ 0.8
PRKCA-203ENST00000578063 ASIC2Q16515 512 aa20.05■□□□□ 0.8
PRKCA-203ENST00000578063 TDRD10Q5VZ19 366 aaKnown RBP20.05■□□□□ 0.8
PRKCA-203ENST00000578063 PHLDB3Q6NSJ2 640 aa20.05■□□□□ 0.8
PRKCA-203ENST00000578063 TOGARAM2Q6ZUX3 1019 aa20.05■□□□□ 0.8
PRKCA-203ENST00000578063 SEMA4DQ92854 862 aa20.05■□□□□ 0.8
PRKCA-203ENST00000578063 WNT8BQ93098 351 aa20.05■□□□□ 0.8
PRKCA-203ENST00000578063 NT5C1BQ96P26 610 aa20.05■□□□□ 0.8
PRKCA-203ENST00000578063 SENP6Q9GZR1 1112 aaPredicted RBP20.05■□□□□ 0.8
PRKCA-203ENST00000578063 PIN4Q9Y237 131 aaKnown RBP20.05■□□□□ 0.8
PRKCA-203ENST00000578063 SERPING1P05155 500 aa20.05■□□□□ 0.8
PRKCA-203ENST00000578063 CXCL8P10145 99 aa20.05■□□□□ 0.8
PRKCA-203ENST00000578063 STAT1P42224 750 aa20.05■□□□□ 0.8
PRKCA-203ENST00000578063 PIK3CAP42336 1068 aa20.05■□□□□ 0.8
PRKCA-203ENST00000578063 GJB7Q6PEY0 223 aa20.05■□□□□ 0.8
PRKCA-203ENST00000578063 SLC43A3Q8NBI5 491 aa20.05■□□□□ 0.8
PRKCA-203ENST00000578063 FAM212AQ96EL1 285 aa20.05■□□□□ 0.8
PRKCA-203ENST00000578063 FAM81BQ96LP2 452 aa20.05■□□□□ 0.8
PRKCA-203ENST00000578063 CCDC94Q9BW85 323 aaPredicted RBP20.05■□□□□ 0.8
PRKCA-203ENST00000578063 ASB7Q9H672 318 aa20.05■□□□□ 0.8
PRKCA-203ENST00000578063 NHEJ1Q9H9Q4 299 aaPredicted RBP20.05■□□□□ 0.8
PRKCA-203ENST00000578063 RRAGDQ9NQL2 400 aaPredicted RBP20.05■□□□□ 0.8
PRKCA-203ENST00000578063 AJAP1Q9UKB5 411 aaPredicted RBP20.05■□□□□ 0.8
PRKCA-203ENST00000578063 SSU72P8A0A1W2PR75 194 aa20.04■□□□□ 0.8
PRKCA-203ENST00000578063 F8VZ95 297 aa20.04■□□□□ 0.8
PRKCA-203ENST00000578063 CAND2O75155 1236 aa20.04■□□□□ 0.8
PRKCA-203ENST00000578063 NPTXRO95502 500 aa20.04■□□□□ 0.8
PRKCA-203ENST00000578063 CCDC175P0C221 793 aa20.04■□□□□ 0.8
PRKCA-203ENST00000578063 MGAT3Q09327 533 aa20.04■□□□□ 0.8
PRKCA-203ENST00000578063 DUOXA2Q1HG44 320 aa20.04■□□□□ 0.8
PRKCA-203ENST00000578063 FAM228AQ86W67 206 aa20.04■□□□□ 0.8
PRKCA-203ENST00000578063 CCDC42Q96M95 316 aa20.04■□□□□ 0.8
PRKCA-203ENST00000578063 ACAP3Q96P50 834 aa20.04■□□□□ 0.8
PRKCA-203ENST00000578063 ARHGAP20Q9P2F6 1191 aa20.04■□□□□ 0.8
PRKCA-203ENST00000578063 PPP2R2CQ9Y2T4 447 aa20.04■□□□□ 0.8
PRKCA-203ENST00000578063 BZW2Q9Y6E2 419 aaKnown RBP20.04■□□□□ 0.8
PRKCA-203ENST00000578063 EPN1Q9Y6I3 576 aaPredicted RBP20.04■□□□□ 0.8
PRKCA-203ENST00000578063 MROH7Q68CQ1 1323 aa20.04■□□□□ 0.8
PRKCA-203ENST00000578063 NDUFA10O95299 355 aa20.03■□□□□ 0.8
PRKCA-203ENST00000578063 MYCP01106 439 aaPredicted RBP20.03■□□□□ 0.8
PRKCA-203ENST00000578063 HLA-DRAP01903 254 aa20.03■□□□□ 0.8
PRKCA-203ENST00000578063 CTSHP09668 335 aa20.03■□□□□ 0.8
PRKCA-203ENST00000578063 FERP16591 822 aa20.03■□□□□ 0.8
PRKCA-203ENST00000578063 THPOP40225 353 aa20.03■□□□□ 0.8
PRKCA-203ENST00000578063 MAPK8IP2Q13387 824 aaPredicted RBP20.03■□□□□ 0.8
PRKCA-203ENST00000578063 DRAP1Q14919 205 aaPredicted RBP20.03■□□□□ 0.8
PRKCA-203ENST00000578063 WDR44Q5JSH3 913 aa20.03■□□□□ 0.8
PRKCA-203ENST00000578063 HGSNATQ68CP4 663 aa20.03■□□□□ 0.8
PRKCA-203ENST00000578063 ARHGEF19Q8IW93 802 aa20.03■□□□□ 0.8
PRKCA-203ENST00000578063 CD302Q8IX05 232 aa20.03■□□□□ 0.8
PRKCA-203ENST00000578063 TMEM192Q8IY95 271 aa20.03■□□□□ 0.8
PRKCA-203ENST00000578063 OR5B17Q8NGF7 314 aa20.03■□□□□ 0.8
PRKCA-203ENST00000578063 ANKRD36BP1Q96IX9 119 aa20.03■□□□□ 0.8
PRKCA-203ENST00000578063 TRIM6Q9C030 488 aaPredicted RBP20.03■□□□□ 0.8
PRKCA-203ENST00000578063 UBE2TQ9NPD8 197 aaPredicted RBP20.03■□□□□ 0.8
PRKCA-203ENST00000578063 TRMT13Q9NUP7 481 aaKnown RBP20.03■□□□□ 0.8
PRKCA-203ENST00000578063 NOC2LQ9Y3T9 749 aaKnown RBP20.03■□□□□ 0.8
PRKCA-203ENST00000578063 ADGRG1Q9Y653 693 aa20.03■□□□□ 0.8
PRKCA-203ENST00000578063 GOLGA6L9A6NEM1 432 aa20.02■□□□□ 0.8
PRKCA-203ENST00000578063 PHACTR2O75167 634 aa20.02■□□□□ 0.8
PRKCA-203ENST00000578063 RPS6KA5O75582 802 aa20.02■□□□□ 0.8
PRKCA-203ENST00000578063 CHRNA1P02708 482 aa20.02■□□□□ 0.8
PRKCA-203ENST00000578063 TMEM191BP0C7N4 346 aa20.02■□□□□ 0.8
PRKCA-203ENST00000578063 CCDC172P0C7W6 258 aa20.02■□□□□ 0.8
PRKCA-203ENST00000578063 CCL5P13501 91 aa20.02■□□□□ 0.8
PRKCA-203ENST00000578063 SOX5P35711 763 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms