RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 ADAM12O43184 909 aa15.73■□□□□ 0.11
PPP4R1-206ENST00000577779 CEBPBP17676 345 aa15.73■□□□□ 0.11
PPP4R1-206ENST00000577779 NCBP1Q09161 790 aaKnown RBP15.73■□□□□ 0.11
PPP4R1-206ENST00000577779 GRIK3Q13003 919 aa15.73■□□□□ 0.11
PPP4R1-206ENST00000577779 GAS6Q14393 721 aa15.73■□□□□ 0.11
PPP4R1-206ENST00000577779 SLC5A9Q2M3M2 681 aa15.73■□□□□ 0.11
PPP4R1-206ENST00000577779 LRSAM1Q6UWE0 723 aa15.73■□□□□ 0.11
PPP4R1-206ENST00000577779 HACE1Q8IYU2 909 aa15.73■□□□□ 0.11
PPP4R1-206ENST00000577779 SPDYE1Q8NFV5 336 aaPredicted RBP15.73■□□□□ 0.11
PPP4R1-206ENST00000577779 HASPINQ8TF76 798 aa15.73■□□□□ 0.11
PPP4R1-206ENST00000577779 TMEM143Q96AN5 459 aa15.73■□□□□ 0.11
PPP4R1-206ENST00000577779 CPB2Q96IY4 423 aa15.73■□□□□ 0.11
PPP4R1-206ENST00000577779 TRIM6Q9C030 488 aaPredicted RBP15.73■□□□□ 0.11
PPP4R1-206ENST00000577779 CACNG4Q9UBN1 327 aa15.73■□□□□ 0.11
PPP4R1-206ENST00000577779 MAST4O15021 2626 aa15.73■□□□□ 0.11
PPP4R1-206ENST00000577779 COL4A2P08572 1712 aa15.72■□□□□ 0.11
PPP4R1-206ENST00000577779 TMEM8BA6NDV4 472 aa15.72■□□□□ 0.11
PPP4R1-206ENST00000577779 K7ESF4 209 aa15.72■□□□□ 0.11
PPP4R1-206ENST00000577779 ZBTB43O43298 467 aa15.72■□□□□ 0.11
PPP4R1-206ENST00000577779 TSPAN1O60635 241 aa15.72■□□□□ 0.11
PPP4R1-206ENST00000577779 PSMD10O75832 226 aa15.72■□□□□ 0.11
PPP4R1-206ENST00000577779 RHOP08100 348 aa15.72■□□□□ 0.11
PPP4R1-206ENST00000577779 CHRNB1P11230 501 aa15.72■□□□□ 0.11
PPP4R1-206ENST00000577779 FCARP24071 287 aa15.72■□□□□ 0.11
PPP4R1-206ENST00000577779 AKAP5P24588 427 aa15.72■□□□□ 0.11
PPP4R1-206ENST00000577779 AXLP30530 894 aa15.72■□□□□ 0.11
PPP4R1-206ENST00000577779 PFKFB3Q16875 520 aaPredicted RBP15.72■□□□□ 0.11
PPP4R1-206ENST00000577779 TTC22Q5TAA0 569 aa15.72■□□□□ 0.11
PPP4R1-206ENST00000577779 PDXDC1Q6P996 788 aa15.72■□□□□ 0.11
PPP4R1-206ENST00000577779 POTEHQ6S545 545 aa15.72■□□□□ 0.11
PPP4R1-206ENST00000577779 RNF149Q8NC42 400 aa15.72■□□□□ 0.11
PPP4R1-206ENST00000577779 GSTCDQ8NEC7 633 aa15.72■□□□□ 0.11
PPP4R1-206ENST00000577779 CCDC12Q8WUD4 166 aaPredicted RBP15.72■□□□□ 0.11
PPP4R1-206ENST00000577779 PAAF1Q9BRP4 392 aa15.72■□□□□ 0.11
PPP4R1-206ENST00000577779 CSRNP2Q9H175 543 aa15.72■□□□□ 0.11
PPP4R1-206ENST00000577779 NXF3Q9H4D5 531 aaKnown RBP15.72■□□□□ 0.11
PPP4R1-206ENST00000577779 ZFP14Q9HCL3 533 aa15.72■□□□□ 0.11
PPP4R1-206ENST00000577779 ZNF334Q9HCZ1 680 aaPredicted RBP15.72■□□□□ 0.11
PPP4R1-206ENST00000577779 LHX6Q9UPM6 363 aa15.72■□□□□ 0.11
PPP4R1-206ENST00000577779 SRRM3A6NNA2 597 aaPredicted RBP15.71■□□□□ 0.11
PPP4R1-206ENST00000577779 PAPSS2O95340 614 aaPredicted RBP15.71■□□□□ 0.11
PPP4R1-206ENST00000577779 GDI1P31150 447 aa15.71■□□□□ 0.11
PPP4R1-206ENST00000577779 OR1D2P34982 312 aa15.71■□□□□ 0.11
PPP4R1-206ENST00000577779 NPEPPSP55786 919 aa15.71■□□□□ 0.11
PPP4R1-206ENST00000577779 FOXC1Q12948 553 aa15.71■□□□□ 0.11
PPP4R1-206ENST00000577779 PTGDRQ13258 359 aa15.71■□□□□ 0.11
PPP4R1-206ENST00000577779 RAB33AQ14088 237 aa15.71■□□□□ 0.11
PPP4R1-206ENST00000577779 LRRC32Q14392 662 aa15.71■□□□□ 0.11
PPP4R1-206ENST00000577779 FAM78AQ5JUQ0 283 aa15.71■□□□□ 0.11
PPP4R1-206ENST00000577779 RTL10Q7L3V2 364 aa15.71■□□□□ 0.11
PPP4R1-206ENST00000577779 MAP4K3Q8IVH8 894 aa15.71■□□□□ 0.11
PPP4R1-206ENST00000577779 EXOC8Q8IYI6 725 aa15.71■□□□□ 0.11
PPP4R1-206ENST00000577779 TRPV5Q9NQA5 729 aa15.71■□□□□ 0.11
PPP4R1-206ENST00000577779 BMP2KQ9NSY1 1161 aaPredicted RBP15.71■□□□□ 0.11
PPP4R1-206ENST00000577779 KLK14Q9P0G3 267 aa15.71■□□□□ 0.11
PPP4R1-206ENST00000577779 GOLGA8AA7E2F4 631 aa15.7■□□□□ 0.1
PPP4R1-206ENST00000577779 GOLGA8BA8MQT2 603 aa15.7■□□□□ 0.1
PPP4R1-206ENST00000577779 KIF4AO95239 1232 aa15.7■□□□□ 0.1
PPP4R1-206ENST00000577779 IGHDP01880 384 aa15.7■□□□□ 0.1
PPP4R1-206ENST00000577779 CCNE1P24864 410 aa15.7■□□□□ 0.1
PPP4R1-206ENST00000577779 GNA11P29992 359 aa15.7■□□□□ 0.1
PPP4R1-206ENST00000577779 PSMC5P62195 406 aa15.7■□□□□ 0.1
PPP4R1-206ENST00000577779 RING1Q06587 406 aa15.7■□□□□ 0.1
PPP4R1-206ENST00000577779 PCBP1Q15365 356 aaKnown RBP eCLIP15.7■□□□□ 0.1
PPP4R1-206ENST00000577779 LOXL4Q96JB6 756 aa15.7■□□□□ 0.1
PPP4R1-206ENST00000577779 CEP170P1Q96L14 293 aa15.7■□□□□ 0.1
PPP4R1-206ENST00000577779 ADAM33Q9BZ11 813 aa15.7■□□□□ 0.1
PPP4R1-206ENST00000577779 AVENQ9NQS1 362 aaPredicted RBP15.7■□□□□ 0.1
PPP4R1-206ENST00000577779 BRPF3Q9ULD4 1205 aa15.7■□□□□ 0.1
PPP4R1-206ENST00000577779 CASTOR2A6NHX0 329 aa15.69■□□□□ 0.1
PPP4R1-206ENST00000577779 SLC27A2O14975 620 aa15.69■□□□□ 0.1
PPP4R1-206ENST00000577779 ASAP2O43150 1006 aa15.69■□□□□ 0.1
PPP4R1-206ENST00000577779 EDIL3O43854 480 aa15.69■□□□□ 0.1
PPP4R1-206ENST00000577779 EPN2O95208 641 aa15.69■□□□□ 0.1
PPP4R1-206ENST00000577779 PTPN2P17706 415 aa15.69■□□□□ 0.1
PPP4R1-206ENST00000577779 PSMC3P17980 439 aa15.69■□□□□ 0.1
PPP4R1-206ENST00000577779 SPINK2P20155 84 aa15.69■□□□□ 0.1
PPP4R1-206ENST00000577779 RFC5P40937 340 aa15.69■□□□□ 0.1
PPP4R1-206ENST00000577779 NOVA1P51513 510 aaKnown RBP15.69■□□□□ 0.1
PPP4R1-206ENST00000577779 USP11P51784 963 aa15.69■□□□□ 0.1
PPP4R1-206ENST00000577779 ZNF252P-AS1Q0IIN9 211 aa15.69■□□□□ 0.1
PPP4R1-206ENST00000577779 TUSC3Q13454 348 aa15.69■□□□□ 0.1
PPP4R1-206ENST00000577779 RNF43Q68DV7 783 aa15.69■□□□□ 0.1
PPP4R1-206ENST00000577779 WDR5BQ86VZ2 330 aa15.69■□□□□ 0.1
PPP4R1-206ENST00000577779 ZNF579Q8NAF0 562 aaKnown RBP15.69■□□□□ 0.1
PPP4R1-206ENST00000577779 BICD2Q8TD16 824 aa15.69■□□□□ 0.1
PPP4R1-206ENST00000577779 DHX33Q9H6R0 707 aaKnown RBP15.69■□□□□ 0.1
PPP4R1-206ENST00000577779 RBM12Q9NTZ6 932 aaKnown RBP15.69■□□□□ 0.1
PPP4R1-206ENST00000577779 PARP2Q9UGN5 583 aa15.69■□□□□ 0.1
PPP4R1-206ENST00000577779 VWA8A3KMH1 1905 aa15.68■□□□□ 0.1
PPP4R1-206ENST00000577779 ZMYM2Q9UBW7 1377 aa15.68■□□□□ 0.1
PPP4R1-206ENST00000577779 INO80B-WBP1J3KQ70 363 aa15.68■□□□□ 0.1
PPP4R1-206ENST00000577779 GIPC1O14908 333 aa15.68■□□□□ 0.1
PPP4R1-206ENST00000577779 ZNF263O14978 683 aa15.68■□□□□ 0.1
PPP4R1-206ENST00000577779 CDC27P30260 824 aa15.68■□□□□ 0.1
PPP4R1-206ENST00000577779 ELAVL2Q12926 359 aaKnown RBP15.68■□□□□ 0.1
PPP4R1-206ENST00000577779 B3GNT9Q6UX72 402 aa15.68■□□□□ 0.1
PPP4R1-206ENST00000577779 VITQ6UXI7 678 aa15.68■□□□□ 0.1
PPP4R1-206ENST00000577779 Q6ZS52 159 aa15.68■□□□□ 0.1
PPP4R1-206ENST00000577779 CACNA2D4Q7Z3S7 1137 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms