RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 GSTCDQ8NEC7 633 aa16.67■□□□□ 0.26
SMG6-220ENST00000576218 STAMQ92783 540 aa16.67■□□□□ 0.26
SMG6-220ENST00000576218 NECAB3Q96P71 396 aaPredicted RBP16.67■□□□□ 0.26
SMG6-220ENST00000576218 PYM1Q9BRP8 204 aaKnown RBP16.67■□□□□ 0.26
SMG6-220ENST00000576218 MSTO1Q9BUK6 570 aa16.67■□□□□ 0.26
SMG6-220ENST00000576218 TNMDQ9H2S6 317 aa16.67■□□□□ 0.26
SMG6-220ENST00000576218 PTPRHQ9HD43 1115 aa16.67■□□□□ 0.26
SMG6-220ENST00000576218 PANK4Q9NVE7 773 aa16.67■□□□□ 0.26
SMG6-220ENST00000576218 CACNG4Q9UBN1 327 aa16.67■□□□□ 0.26
SMG6-220ENST00000576218 PCDHA7Q9UN72 937 aa16.67■□□□□ 0.26
SMG6-220ENST00000576218 EXOC7Q9UPT5 735 aa16.67■□□□□ 0.26
SMG6-220ENST00000576218 F8W810 466 aa16.66■□□□□ 0.26
SMG6-220ENST00000576218 POLR2DO15514 142 aaKnown RBP16.66■□□□□ 0.26
SMG6-220ENST00000576218 PROZP22891 400 aa16.66■□□□□ 0.26
SMG6-220ENST00000576218 LTBRP36941 435 aa16.66■□□□□ 0.26
SMG6-220ENST00000576218 ASIC1P78348 528 aa16.66■□□□□ 0.26
SMG6-220ENST00000576218 PPP2R3AQ06190 1150 aa16.66■□□□□ 0.26
SMG6-220ENST00000576218 MCL1Q07820 350 aa16.66■□□□□ 0.26
SMG6-220ENST00000576218 PTPN14Q15678 1187 aa16.66■□□□□ 0.26
SMG6-220ENST00000576218 KYAT1Q16773 422 aa16.66■□□□□ 0.26
SMG6-220ENST00000576218 USP41Q3LFD5 358 aa16.66■□□□□ 0.26
SMG6-220ENST00000576218 SEZ6Q53EL9 994 aa16.66■□□□□ 0.26
SMG6-220ENST00000576218 ZC2HC1CQ53FD0 456 aaPredicted RBP16.66■□□□□ 0.26
SMG6-220ENST00000576218 STXBP4Q6ZWJ1 553 aa16.66■□□□□ 0.26
SMG6-220ENST00000576218 PPFIBP1Q86W92 1011 aa16.66■□□□□ 0.26
SMG6-220ENST00000576218 CEP57Q86XR8 500 aa16.66■□□□□ 0.26
SMG6-220ENST00000576218 CEP57L1Q8IYX8 460 aa16.66■□□□□ 0.26
SMG6-220ENST00000576218 SYCP3Q8IZU3 236 aa16.66■□□□□ 0.26
SMG6-220ENST00000576218 SNX27Q96L92 541 aa16.66■□□□□ 0.26
SMG6-220ENST00000576218 UROC1Q96N76 676 aa16.66■□□□□ 0.26
SMG6-220ENST00000576218 APOL5Q9BWW9 433 aa16.66■□□□□ 0.26
SMG6-220ENST00000576218 VN1R3Q9BXE9 311 aa16.66■□□□□ 0.26
SMG6-220ENST00000576218 TCF20Q9UGU0 1960 aaKnown RBP16.66■□□□□ 0.26
SMG6-220ENST00000576218 SMIM28A0A1B0GU29 152 aa16.65■□□□□ 0.26
SMG6-220ENST00000576218 GRXCR2A6NFK2 248 aa16.65■□□□□ 0.26
SMG6-220ENST00000576218 TNFRSF10AO00220 468 aa16.65■□□□□ 0.26
SMG6-220ENST00000576218 CLASP2O75122 1294 aaKnown RBP16.65■□□□□ 0.26
SMG6-220ENST00000576218 KIF4AO95239 1232 aa16.65■□□□□ 0.26
SMG6-220ENST00000576218 GLP2RO95838 553 aa16.65■□□□□ 0.26
SMG6-220ENST00000576218 ADH1AP07327 375 aa16.65■□□□□ 0.26
SMG6-220ENST00000576218 CLTAP09496 248 aa16.65■□□□□ 0.26
SMG6-220ENST00000576218 RBM10P98175 930 aaKnown RBP16.65■□□□□ 0.26
SMG6-220ENST00000576218 GTF2BQ00403 316 aa16.65■□□□□ 0.26
SMG6-220ENST00000576218 ELAVL2Q12926 359 aaKnown RBP16.65■□□□□ 0.26
SMG6-220ENST00000576218 ELMSAN1Q6PJG2 1045 aa16.65■□□□□ 0.26
SMG6-220ENST00000576218 MAP4K3Q8IVH8 894 aa16.65■□□□□ 0.26
SMG6-220ENST00000576218 HVCN1Q96D96 273 aa16.65■□□□□ 0.26
SMG6-220ENST00000576218 FAM212AQ96EL1 285 aa16.65■□□□□ 0.26
SMG6-220ENST00000576218 MAGEF1Q9HAY2 307 aa16.65■□□□□ 0.26
SMG6-220ENST00000576218 PCDHB13Q9Y5F0 798 aa16.65■□□□□ 0.26
SMG6-220ENST00000576218 HCFC2Q9Y5Z7 792 aa16.65■□□□□ 0.26
SMG6-220ENST00000576218 CUL9Q8IWT3 2517 aa16.65■□□□□ 0.26
SMG6-220ENST00000576218 MBTPS2O43462 519 aa16.64■□□□□ 0.25
SMG6-220ENST00000576218 B3GAT3O94766 335 aa16.64■□□□□ 0.25
SMG6-220ENST00000576218 CXCL8P10145 99 aa16.64■□□□□ 0.25
SMG6-220ENST00000576218 CREMQ03060 361 aa16.64■□□□□ 0.25
SMG6-220ENST00000576218 ALCAMQ13740 583 aa16.64■□□□□ 0.25
SMG6-220ENST00000576218 AXDND1Q5T1B0 1012 aaPredicted RBP16.64■□□□□ 0.25
SMG6-220ENST00000576218 RESP18Q5W5W9 173 aa16.64■□□□□ 0.25
SMG6-220ENST00000576218 ADALQ6DHV7 355 aa16.64■□□□□ 0.25
SMG6-220ENST00000576218 SLFN12LQ6IEE8 588 aa16.64■□□□□ 0.25
SMG6-220ENST00000576218 ANKRD54Q6NXT1 300 aa16.64■□□□□ 0.25
SMG6-220ENST00000576218 ZNF720Q7Z2F6 126 aa16.64■□□□□ 0.25
SMG6-220ENST00000576218 NOC3LQ8WTT2 800 aaKnown RBP16.64■□□□□ 0.25
SMG6-220ENST00000576218 LEO1Q8WVC0 666 aaPredicted RBP16.64■□□□□ 0.25
SMG6-220ENST00000576218 RIN2Q8WYP3 895 aaPredicted RBP16.64■□□□□ 0.25
SMG6-220ENST00000576218 DNAJC19Q96DA6 116 aa16.64■□□□□ 0.25
SMG6-220ENST00000576218 B3GALT6Q96L58 329 aa16.64■□□□□ 0.25
SMG6-220ENST00000576218 PPP1R10Q96QC0 940 aaKnown RBP16.64■□□□□ 0.25
SMG6-220ENST00000576218 ACCSQ96QU6 501 aa16.64■□□□□ 0.25
SMG6-220ENST00000576218 PAAF1Q9BRP4 392 aa16.64■□□□□ 0.25
SMG6-220ENST00000576218 SCAND2PQ9GZW5 306 aaPredicted RBP16.64■□□□□ 0.25
SMG6-220ENST00000576218 CXCL16Q9H2A7 254 aa16.64■□□□□ 0.25
SMG6-220ENST00000576218 RPF1Q9H9Y2 349 aaKnown RBP16.64■□□□□ 0.25
SMG6-220ENST00000576218 GOLGA2P5Q9HBQ8 144 aa16.64■□□□□ 0.25
SMG6-220ENST00000576218 DZANK1Q9NVP4 752 aa16.64■□□□□ 0.25
SMG6-220ENST00000576218 CLEC1BQ9P126 229 aa16.64■□□□□ 0.25
SMG6-220ENST00000576218 RCOR1Q9UKL0 485 aa16.64■□□□□ 0.25
SMG6-220ENST00000576218 KCNH3Q9ULD8 1083 aa16.64■□□□□ 0.25
SMG6-220ENST00000576218 NUB1Q9Y5A7 615 aa16.64■□□□□ 0.25
SMG6-220ENST00000576218 IRAK3Q9Y616 596 aa16.64■□□□□ 0.25
SMG6-220ENST00000576218 ABLIM1O14639 778 aa16.63■□□□□ 0.25
SMG6-220ENST00000576218 OGTO15294 1046 aa16.63■□□□□ 0.25
SMG6-220ENST00000576218 XPOTO43592 962 aaKnown RBP16.63■□□□□ 0.25
SMG6-220ENST00000576218 TRAPPC3O43617 180 aa16.63■□□□□ 0.25
SMG6-220ENST00000576218 PIGRP01833 764 aa16.63■□□□□ 0.25
SMG6-220ENST00000576218 CLCNKBP51801 687 aa16.63■□□□□ 0.25
SMG6-220ENST00000576218 NUCB2P80303 420 aa16.63■□□□□ 0.25
SMG6-220ENST00000576218 COASYQ13057 564 aa16.63■□□□□ 0.25
SMG6-220ENST00000576218 E2F4Q16254 413 aa16.63■□□□□ 0.25
SMG6-220ENST00000576218 FAM171A1Q5VUB5 890 aa16.63■□□□□ 0.25
SMG6-220ENST00000576218 CES5AQ6NT32 575 aa16.63■□□□□ 0.25
SMG6-220ENST00000576218 TAS1R1Q7RTX1 841 aa16.63■□□□□ 0.25
SMG6-220ENST00000576218 GLYCTKQ8IVS8 523 aa16.63■□□□□ 0.25
SMG6-220ENST00000576218 SMRP1Q8NCR6 262 aa16.63■□□□□ 0.25
SMG6-220ENST00000576218 VN1R2Q8NFZ6 395 aa16.63■□□□□ 0.25
SMG6-220ENST00000576218 POMGNT1Q8WZA1 660 aa16.63■□□□□ 0.25
SMG6-220ENST00000576218 KIF12Q96FN5 646 aa16.63■□□□□ 0.25
SMG6-220ENST00000576218 DDX27Q96GQ7 796 aaKnown RBP16.63■□□□□ 0.25
SMG6-220ENST00000576218 KLHL5Q96PQ7 755 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms