RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 DNMT3BQ9UBC3 853 aaKnown RBP11.07□□□□□ -0.64
CALCOCO2-227ENST00000575560 KCNH3Q9ULD8 1083 aa11.07□□□□□ -0.64
CALCOCO2-227ENST00000575560 KCNJ14Q9UNX9 436 aa11.07□□□□□ -0.64
CALCOCO2-227ENST00000575560 TDRD15B5MCY1 1934 aaKnown RBP11.06□□□□□ -0.64
CALCOCO2-227ENST00000575560 CCDC194A0A1B0GVG4 234 aa11.06□□□□□ -0.64
CALCOCO2-227ENST00000575560 PTGESO14684 152 aa11.06□□□□□ -0.64
CALCOCO2-227ENST00000575560 CCNT1O60563 726 aaKnown RBP11.06□□□□□ -0.64
CALCOCO2-227ENST00000575560 XYLBO75191 536 aa11.06□□□□□ -0.64
CALCOCO2-227ENST00000575560 DGAT1O75907 488 aa11.06□□□□□ -0.64
CALCOCO2-227ENST00000575560 KIF4AO95239 1232 aa11.06□□□□□ -0.64
CALCOCO2-227ENST00000575560 LYPLA2O95372 231 aa11.06□□□□□ -0.64
CALCOCO2-227ENST00000575560 GLRA2P23416 452 aa11.06□□□□□ -0.64
CALCOCO2-227ENST00000575560 TARSP26639 723 aaKnown RBP11.06□□□□□ -0.64
CALCOCO2-227ENST00000575560 CYP4A11Q02928 519 aa11.06□□□□□ -0.64
CALCOCO2-227ENST00000575560 RAB33AQ14088 237 aa11.06□□□□□ -0.64
CALCOCO2-227ENST00000575560 NAB2Q15742 525 aa11.06□□□□□ -0.64
CALCOCO2-227ENST00000575560 PSMD5Q16401 504 aa11.06□□□□□ -0.64
CALCOCO2-227ENST00000575560 AXDND1Q5T1B0 1012 aaPredicted RBP11.06□□□□□ -0.64
CALCOCO2-227ENST00000575560 NCAPH2Q6IBW4 605 aa11.06□□□□□ -0.64
CALCOCO2-227ENST00000575560 POTEHQ6S545 545 aa11.06□□□□□ -0.64
CALCOCO2-227ENST00000575560 RUFY3Q7L099 469 aa11.06□□□□□ -0.64
CALCOCO2-227ENST00000575560 RTL10Q7L3V2 364 aa11.06□□□□□ -0.64
CALCOCO2-227ENST00000575560 CEP57Q86XR8 500 aa11.06□□□□□ -0.64
CALCOCO2-227ENST00000575560 TPH2Q8IWU9 490 aa11.06□□□□□ -0.64
CALCOCO2-227ENST00000575560 NPAS3Q8IXF0 933 aa11.06□□□□□ -0.64
CALCOCO2-227ENST00000575560 KXD1Q9BQD3 176 aa11.06□□□□□ -0.64
CALCOCO2-227ENST00000575560 PLA2G2FQ9BZM2 168 aa11.06□□□□□ -0.64
CALCOCO2-227ENST00000575560 ZSWIM6Q9HCJ5 1215 aa11.06□□□□□ -0.64
CALCOCO2-227ENST00000575560 ANKEF1Q9NU02 776 aa11.06□□□□□ -0.64
CALCOCO2-227ENST00000575560 HCFC1R1Q9NWW0 138 aa11.06□□□□□ -0.64
CALCOCO2-227ENST00000575560 PARP2Q9UGN5 583 aa11.06□□□□□ -0.64
CALCOCO2-227ENST00000575560 SMG5Q9UPR3 1016 aaKnown RBP11.06□□□□□ -0.64
CALCOCO2-227ENST00000575560 MYH15Q9Y2K3 1946 aa11.05□□□□□ -0.64
CALCOCO2-227ENST00000575560 CASTOR2A6NHX0 329 aa11.05□□□□□ -0.64
CALCOCO2-227ENST00000575560 CPLX1O14810 134 aa11.05□□□□□ -0.64
CALCOCO2-227ENST00000575560 NCAM2O15394 837 aa11.05□□□□□ -0.64
CALCOCO2-227ENST00000575560 TBC1D4O60343 1298 aa11.05□□□□□ -0.64
CALCOCO2-227ENST00000575560 ECI2O75521 394 aa11.05□□□□□ -0.64
CALCOCO2-227ENST00000575560 LMNB2Q03252 620 aa11.05□□□□□ -0.64
CALCOCO2-227ENST00000575560 PDXDC1Q6P996 788 aa11.05□□□□□ -0.64
CALCOCO2-227ENST00000575560 TSSK4Q6SA08 328 aa11.05□□□□□ -0.64
CALCOCO2-227ENST00000575560 MAMSTRQ6ZN01 415 aa11.05□□□□□ -0.64
CALCOCO2-227ENST00000575560 SLFN12Q8IYM2 578 aa11.05□□□□□ -0.64
CALCOCO2-227ENST00000575560 ZNF687Q8N1G0 1237 aa11.05□□□□□ -0.64
CALCOCO2-227ENST00000575560 SLC7A14Q8TBB6 771 aa11.05□□□□□ -0.64
CALCOCO2-227ENST00000575560 HASPINQ8TF76 798 aa11.05□□□□□ -0.64
CALCOCO2-227ENST00000575560 SECISBP2LQ93073 1101 aaKnown RBP11.05□□□□□ -0.64
CALCOCO2-227ENST00000575560 NAP1L4Q99733 375 aaKnown RBP11.05□□□□□ -0.64
CALCOCO2-227ENST00000575560 EIF2AK1Q9BQI3 630 aaKnown RBP11.05□□□□□ -0.64
CALCOCO2-227ENST00000575560 RTKNQ9BST9 563 aa11.05□□□□□ -0.64
CALCOCO2-227ENST00000575560 FAM126AQ9BYI3 521 aaPredicted RBP11.05□□□□□ -0.64
CALCOCO2-227ENST00000575560 CXCL16Q9H2A7 254 aa11.05□□□□□ -0.64
CALCOCO2-227ENST00000575560 AVENQ9NQS1 362 aaPredicted RBP11.05□□□□□ -0.64
CALCOCO2-227ENST00000575560 PRMT8Q9NR22 394 aaPredicted RBP11.05□□□□□ -0.64
CALCOCO2-227ENST00000575560 GDE1Q9NZC3 331 aa11.05□□□□□ -0.64
CALCOCO2-227ENST00000575560 POLIQ9UNA4 740 aa11.05□□□□□ -0.64
CALCOCO2-227ENST00000575560 SSUH2Q9Y2M2 353 aa11.05□□□□□ -0.64
CALCOCO2-227ENST00000575560 MIA3Q5JRA6 1907 aa11.05□□□□□ -0.64
CALCOCO2-227ENST00000575560 NOTCH4Q99466 2003 aa11.04□□□□□ -0.64
CALCOCO2-227ENST00000575560 TTLL13PA6NNM8 815 aa11.04□□□□□ -0.64
CALCOCO2-227ENST00000575560 MARCH6O60337 910 aa11.04□□□□□ -0.64
CALCOCO2-227ENST00000575560 BAG4O95429 457 aaKnown RBP11.04□□□□□ -0.64
CALCOCO2-227ENST00000575560 THP07101 528 aa11.04□□□□□ -0.64
CALCOCO2-227ENST00000575560 TDGF1P13385 188 aa11.04□□□□□ -0.64
CALCOCO2-227ENST00000575560 FGFR3P22607 806 aa11.04□□□□□ -0.64
CALCOCO2-227ENST00000575560 IGFBP6P24592 240 aaPredicted RBP11.04□□□□□ -0.64
CALCOCO2-227ENST00000575560 OR1D2P34982 312 aa11.04□□□□□ -0.64
CALCOCO2-227ENST00000575560 RARRES1P49788 294 aa11.04□□□□□ -0.64
CALCOCO2-227ENST00000575560 ADCY1Q08828 1119 aa11.04□□□□□ -0.64
CALCOCO2-227ENST00000575560 ELAVL2Q12926 359 aaKnown RBP11.04□□□□□ -0.64
CALCOCO2-227ENST00000575560 MTAPQ13126 283 aa11.04□□□□□ -0.64
CALCOCO2-227ENST00000575560 FAM187BQ17R55 369 aa11.04□□□□□ -0.64
CALCOCO2-227ENST00000575560 PABPC1LQ4VXU2 614 aaKnown RBP11.04□□□□□ -0.64
CALCOCO2-227ENST00000575560 EARS2Q5JPH6 523 aaKnown RBP11.04□□□□□ -0.64
CALCOCO2-227ENST00000575560 ZNF852Q6ZMS4 543 aa11.04□□□□□ -0.64
CALCOCO2-227ENST00000575560 TPRG1Q6ZUI0 275 aa11.04□□□□□ -0.64
CALCOCO2-227ENST00000575560 OXER1Q8TDS5 423 aa11.04□□□□□ -0.64
CALCOCO2-227ENST00000575560 PRIMPOLQ96LW4 560 aa11.04□□□□□ -0.64
CALCOCO2-227ENST00000575560 LARP6Q9BRS8 491 aaKnown RBP11.04□□□□□ -0.64
CALCOCO2-227ENST00000575560 FZD8Q9H461 694 aa11.04□□□□□ -0.64
CALCOCO2-227ENST00000575560 PARD6AQ9NPB6 346 aa11.04□□□□□ -0.64
CALCOCO2-227ENST00000575560 GJB4Q9NTQ9 266 aa11.04□□□□□ -0.64
CALCOCO2-227ENST00000575560 CDV3Q9UKY7 258 aaKnown RBP11.04□□□□□ -0.64
CALCOCO2-227ENST00000575560 PATJQ8NI35 1801 aa11.04□□□□□ -0.64
CALCOCO2-227ENST00000575560 CHD8Q9HCK8 2581 aa11.03□□□□□ -0.64
CALCOCO2-227ENST00000575560 DCDC2BA2VCK2 349 aa11.03□□□□□ -0.64
CALCOCO2-227ENST00000575560 XRCC6P12956 609 aaKnown RBP eCLIP11.03□□□□□ -0.64
CALCOCO2-227ENST00000575560 SLC5A9Q2M3M2 681 aa11.03□□□□□ -0.64
CALCOCO2-227ENST00000575560 CDCA2Q69YH5 1023 aaPredicted RBP11.03□□□□□ -0.64
CALCOCO2-227ENST00000575560 TANGO2Q6ICL3 276 aa11.03□□□□□ -0.64
CALCOCO2-227ENST00000575560 CPLX2Q6PUV4 134 aaKnown RBP11.03□□□□□ -0.64
CALCOCO2-227ENST00000575560 CD300LGQ6UXG3 332 aa11.03□□□□□ -0.64
CALCOCO2-227ENST00000575560 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.03□□□□□ -0.64
CALCOCO2-227ENST00000575560 PIK3AP1Q6ZUJ8 805 aa11.03□□□□□ -0.64
CALCOCO2-227ENST00000575560 PIGOQ8TEQ8 1089 aa11.03□□□□□ -0.64
CALCOCO2-227ENST00000575560 ING5Q8WYH8 240 aa11.03□□□□□ -0.64
CALCOCO2-227ENST00000575560 ELSPBP1Q96BH3 223 aa11.03□□□□□ -0.64
CALCOCO2-227ENST00000575560 MCRS1Q96EZ8 462 aa11.03□□□□□ -0.64
CALCOCO2-227ENST00000575560 POLR3FQ9H1D9 316 aaPredicted RBP11.03□□□□□ -0.64
CALCOCO2-227ENST00000575560 PDZD7Q9H5P4 517 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms