RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 TDRD10Q5VZ19 366 aaKnown RBP11.26□□□□□ -0.61
USP43-205ENST00000574408 LEKR1Q6ZMV7 388 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 C15orf39Q6ZRI6 1047 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 PNMA8AQ86V59 439 aaPredicted RBP11.26□□□□□ -0.61
USP43-205ENST00000574408 RNF149Q8NC42 400 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 SHCBP1Q8NEM2 672 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 KCNN1Q92952 543 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 ZNF668Q96K58 619 aaPredicted RBP11.26□□□□□ -0.61
USP43-205ENST00000574408 ISCUQ9H1K1 167 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 COG5Q9UP83 839 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 STXBP5LQ9Y2K9 1186 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 ASB14A6NK59 587 aa11.25□□□□□ -0.61
USP43-205ENST00000574408 RTN2O75298 545 aa11.25□□□□□ -0.61
USP43-205ENST00000574408 LDHAP00338 332 aaKnown RBP11.25□□□□□ -0.61
USP43-205ENST00000574408 FMO1Q01740 532 aa11.25□□□□□ -0.61
USP43-205ENST00000574408 LAMTOR4Q0VGL1 99 aa11.25□□□□□ -0.61
USP43-205ENST00000574408 MKRN4PQ13434 485 aaPredicted RBP11.25□□□□□ -0.61
USP43-205ENST00000574408 WDR44Q5JSH3 913 aa11.25□□□□□ -0.61
USP43-205ENST00000574408 ARMCX2Q7L311 632 aa11.25□□□□□ -0.61
USP43-205ENST00000574408 ZBTB33Q86T24 672 aa11.25□□□□□ -0.61
USP43-205ENST00000574408 GPRC5AQ8NFJ5 357 aa11.25□□□□□ -0.61
USP43-205ENST00000574408 ZBTB42B2RXF5 422 aa11.25□□□□□ -0.61
USP43-205ENST00000574408 PDHXO00330 501 aa11.25□□□□□ -0.61
USP43-205ENST00000574408 CES2O00748 559 aa11.25□□□□□ -0.61
USP43-205ENST00000574408 CLDN3O15551 220 aa11.25□□□□□ -0.61
USP43-205ENST00000574408 ATMINO43313 823 aaPredicted RBP11.25□□□□□ -0.61
USP43-205ENST00000574408 CALCAP01258 141 aa11.25□□□□□ -0.61
USP43-205ENST00000574408 CCNA1P78396 465 aa11.25□□□□□ -0.61
USP43-205ENST00000574408 GCNT1Q02742 428 aa11.25□□□□□ -0.61
USP43-205ENST00000574408 GJC2Q5T442 439 aaPredicted RBP11.25□□□□□ -0.61
USP43-205ENST00000574408 SPOPLQ6IQ16 392 aa11.25□□□□□ -0.61
USP43-205ENST00000574408 PLPPR4Q7Z2D5 763 aa11.25□□□□□ -0.61
USP43-205ENST00000574408 RHOT2Q8IXI1 618 aa11.25□□□□□ -0.61
USP43-205ENST00000574408 KLHL7Q8IXQ5 586 aa11.25□□□□□ -0.61
USP43-205ENST00000574408 SCFD2Q8WU76 684 aa11.25□□□□□ -0.61
USP43-205ENST00000574408 TCP11Q8WWU5 503 aa11.25□□□□□ -0.61
USP43-205ENST00000574408 UBXN6Q9BZV1 441 aa11.25□□□□□ -0.61
USP43-205ENST00000574408 CCL15-CCL14A0A0B4J2E2 113 aa11.25□□□□□ -0.61
USP43-205ENST00000574408 PGRMC1O00264 195 aaKnown RBP11.25□□□□□ -0.61
USP43-205ENST00000574408 ZC3H11AO75152 810 aaKnown RBP eCLIP11.25□□□□□ -0.61
USP43-205ENST00000574408 C4BPAP04003 597 aaKnown RBP11.25□□□□□ -0.61
USP43-205ENST00000574408 EFNA5P52803 228 aa11.25□□□□□ -0.61
USP43-205ENST00000574408 TNNC1P63316 161 aa11.25□□□□□ -0.61
USP43-205ENST00000574408 GPC5P78333 572 aa11.25□□□□□ -0.61
USP43-205ENST00000574408 CLDN10P78369 228 aa11.25□□□□□ -0.61
USP43-205ENST00000574408 CDR2Q01850 454 aa11.25□□□□□ -0.61
USP43-205ENST00000574408 CCL15Q16663 113 aa11.25□□□□□ -0.61
USP43-205ENST00000574408 RHPN2Q8IUC4 686 aa11.25□□□□□ -0.61
USP43-205ENST00000574408 ZBTB8OSQ8IWT0 167 aa11.25□□□□□ -0.61
USP43-205ENST00000574408 ZBTB10Q96DT7 871 aa11.25□□□□□ -0.61
USP43-205ENST00000574408 HES6Q96HZ4 224 aa11.25□□□□□ -0.61
USP43-205ENST00000574408 NOC2LQ9Y3T9 749 aaKnown RBP11.25□□□□□ -0.61
USP43-205ENST00000574408 PPME1Q9Y570 386 aa11.25□□□□□ -0.61
USP43-205ENST00000574408 ZNFX1Q9P2E3 1918 aaKnown RBP11.24□□□□□ -0.61
USP43-205ENST00000574408 TMEM110-MUSTN1A8MSY1 372 aa11.24□□□□□ -0.61
USP43-205ENST00000574408 H3BQF6 201 aa11.24□□□□□ -0.61
USP43-205ENST00000574408 GJB1P08034 283 aa11.24□□□□□ -0.61
USP43-205ENST00000574408 GZMAP12544 262 aa11.24□□□□□ -0.61
USP43-205ENST00000574408 ENOSF1Q7L5Y1 443 aa11.24□□□□□ -0.61
USP43-205ENST00000574408 ACTRT1Q8TDG2 376 aa11.24□□□□□ -0.61
USP43-205ENST00000574408 MORC4Q8TE76 937 aa11.24□□□□□ -0.61
USP43-205ENST00000574408 MRPL4Q9BYD3 311 aaKnown RBP11.24□□□□□ -0.61
USP43-205ENST00000574408 SMARCAD1Q9H4L7 1026 aa11.24□□□□□ -0.61
USP43-205ENST00000574408 ADGRA2Q96PE1 1338 aa11.24□□□□□ -0.61
USP43-205ENST00000574408 BTBD19C9JJ37 291 aa11.24□□□□□ -0.61
USP43-205ENST00000574408 MSCO60682 206 aa11.24□□□□□ -0.61
USP43-205ENST00000574408 PRKCBP05771 671 aa11.24□□□□□ -0.61
USP43-205ENST00000574408 ZBTB48P10074 688 aaPredicted RBP11.24□□□□□ -0.61
USP43-205ENST00000574408 ADORA2AP29274 412 aa11.24□□□□□ -0.61
USP43-205ENST00000574408 MXD4Q14582 209 aaPredicted RBP11.24□□□□□ -0.61
USP43-205ENST00000574408 MAPK6Q16659 721 aa11.24□□□□□ -0.61
USP43-205ENST00000574408 GLE1Q53GS7 698 aaKnown RBP11.24□□□□□ -0.61
USP43-205ENST00000574408 ZPBP2Q6X784 338 aa11.24□□□□□ -0.61
USP43-205ENST00000574408 NLRP4Q96MN2 994 aa11.24□□□□□ -0.61
USP43-205ENST00000574408 CGRRF1Q99675 332 aa11.24□□□□□ -0.61
USP43-205ENST00000574408 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.24□□□□□ -0.61
USP43-205ENST00000574408 AP1M1Q9BXS5 423 aa11.24□□□□□ -0.61
USP43-205ENST00000574408 TOM1L1O75674 476 aa11.23□□□□□ -0.61
USP43-205ENST00000574408 HEXIM1O94992 359 aaKnown RBP11.23□□□□□ -0.61
USP43-205ENST00000574408 VNN1O95497 513 aa11.23□□□□□ -0.61
USP43-205ENST00000574408 GLI1P08151 1106 aa11.23□□□□□ -0.61
USP43-205ENST00000574408 CETPP11597 493 aa11.23□□□□□ -0.61
USP43-205ENST00000574408 TNFSF9P41273 254 aa11.23□□□□□ -0.61
USP43-205ENST00000574408 CLCN3P51790 818 aa11.23□□□□□ -0.61
USP43-205ENST00000574408 IGBP1P78318 339 aa11.23□□□□□ -0.61
USP43-205ENST00000574408 OR5B17Q8NGF7 314 aa11.23□□□□□ -0.61
USP43-205ENST00000574408 GTF3C2Q8WUA4 911 aaPredicted RBP11.23□□□□□ -0.61
USP43-205ENST00000574408 RUBCNQ92622 972 aa11.23□□□□□ -0.61
USP43-205ENST00000574408 ZNF653Q96CK0 615 aa11.23□□□□□ -0.61
USP43-205ENST00000574408 FAM212AQ96EL1 285 aa11.23□□□□□ -0.61
USP43-205ENST00000574408 ZC3H4Q9UPT8 1303 aaKnown RBP11.23□□□□□ -0.61
USP43-205ENST00000574408 IGKV6-21A0A0C4DH24 114 aa11.23□□□□□ -0.61
USP43-205ENST00000574408 ESYT3A0FGR9 886 aa11.23□□□□□ -0.61
USP43-205ENST00000574408 ZSCAN5CA6NGD5 496 aaPredicted RBP11.23□□□□□ -0.61
USP43-205ENST00000574408 GAS2O43903 313 aaKnown RBP11.23□□□□□ -0.61
USP43-205ENST00000574408 ZSCAN26Q16670 478 aa11.23□□□□□ -0.61
USP43-205ENST00000574408 AENQ8WTP8 325 aaKnown RBP11.23□□□□□ -0.61
USP43-205ENST00000574408 CCDC113Q9H0I3 377 aa11.23□□□□□ -0.61
USP43-205ENST00000574408 IVNS1ABPQ9Y6Y0 642 aa11.23□□□□□ -0.61
USP43-205ENST00000574408 CNTNAP2Q9UHC6 1331 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms