RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 SCFD1Q8WVM8 642 aa13.91□□□□□ -0.18
TRAPPC1-206ENST00000573989 SNX27Q96L92 541 aa13.91□□□□□ -0.18
TRAPPC1-206ENST00000573989 COLEC11Q9BWP8 271 aa13.91□□□□□ -0.18
TRAPPC1-206ENST00000573989 FGFBP2Q9BYJ0 223 aa13.91□□□□□ -0.18
TRAPPC1-206ENST00000573989 MIOSQ9NXC5 875 aa13.91□□□□□ -0.18
TRAPPC1-206ENST00000573989 HCSTQ9UBK5 93 aa13.91□□□□□ -0.18
TRAPPC1-206ENST00000573989 PLAGL2Q9UPG8 496 aa13.91□□□□□ -0.18
TRAPPC1-206ENST00000573989 LZTS1Q9Y250 596 aa13.91□□□□□ -0.18
TRAPPC1-206ENST00000573989 EPOPA6NHQ4 379 aa13.9□□□□□ -0.18
TRAPPC1-206ENST00000573989 RFXAPO00287 272 aa13.9□□□□□ -0.18
TRAPPC1-206ENST00000573989 DDHD2O94830 711 aa13.9□□□□□ -0.18
TRAPPC1-206ENST00000573989 ITGB1P05556 798 aa13.9□□□□□ -0.18
TRAPPC1-206ENST00000573989 GALTP07902 379 aa13.9□□□□□ -0.18
TRAPPC1-206ENST00000573989 POU3F3P20264 500 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC1-206ENST00000573989 AFF1P51825 1210 aaKnown RBP13.9□□□□□ -0.18
TRAPPC1-206ENST00000573989 DSC1Q08554 894 aa13.9□□□□□ -0.18
TRAPPC1-206ENST00000573989 TUSC3Q13454 348 aa13.9□□□□□ -0.18
TRAPPC1-206ENST00000573989 XKR4Q5GH76 650 aa13.9□□□□□ -0.18
TRAPPC1-206ENST00000573989 PDE12Q6L8Q7 609 aaKnown RBP13.9□□□□□ -0.18
TRAPPC1-206ENST00000573989 ALKAL1Q6UXT8 129 aa13.9□□□□□ -0.18
TRAPPC1-206ENST00000573989 NELFCDQ8IXH7 590 aa13.9□□□□□ -0.18
TRAPPC1-206ENST00000573989 SLC39A11Q8N1S5 342 aa13.9□□□□□ -0.18
TRAPPC1-206ENST00000573989 GLIS3Q8NEA6 775 aa13.9□□□□□ -0.18
TRAPPC1-206ENST00000573989 GSTCDQ8NEC7 633 aa13.9□□□□□ -0.18
TRAPPC1-206ENST00000573989 PPP2R3CQ969Q6 453 aa13.9□□□□□ -0.18
TRAPPC1-206ENST00000573989 MRPL38Q96DV4 380 aaKnown RBP13.9□□□□□ -0.18
TRAPPC1-206ENST00000573989 UROC1Q96N76 676 aa13.9□□□□□ -0.18
TRAPPC1-206ENST00000573989 HAPLN2Q9GZV7 340 aa13.9□□□□□ -0.18
TRAPPC1-206ENST00000573989 KIAA1586Q9HCI6 787 aa13.9□□□□□ -0.18
TRAPPC1-206ENST00000573989 ALG13Q9NP73 1137 aaKnown RBP13.9□□□□□ -0.18
TRAPPC1-206ENST00000573989 CNTN3Q9P232 1028 aa13.9□□□□□ -0.18
TRAPPC1-206ENST00000573989 DNAJB4Q9UDY4 337 aa13.9□□□□□ -0.18
TRAPPC1-206ENST00000573989 CPSF3Q9UKF6 684 aaKnown RBP13.9□□□□□ -0.18
TRAPPC1-206ENST00000573989 STXBP5LQ9Y2K9 1186 aa13.9□□□□□ -0.18
TRAPPC1-206ENST00000573989 CHD9Q3L8U1 2897 aa13.9□□□□□ -0.18
TRAPPC1-206ENST00000573989 CDH23Q9H251 3354 aa13.89□□□□□ -0.19
TRAPPC1-206ENST00000573989 SMIM28A0A1B0GU29 152 aa13.89□□□□□ -0.19
TRAPPC1-206ENST00000573989 NT5C1B-RDH14C9J2C7 533 aa13.89□□□□□ -0.19
TRAPPC1-206ENST00000573989 PTGESO14684 152 aa13.89□□□□□ -0.19
TRAPPC1-206ENST00000573989 NRP1O14786 923 aa13.89□□□□□ -0.19
TRAPPC1-206ENST00000573989 EXTL3O43909 919 aa13.89□□□□□ -0.19
TRAPPC1-206ENST00000573989 LPXNO60711 386 aa13.89□□□□□ -0.19
TRAPPC1-206ENST00000573989 CXCL8P10145 99 aa13.89□□□□□ -0.19
TRAPPC1-206ENST00000573989 KCNE1P15382 129 aa13.89□□□□□ -0.19
TRAPPC1-206ENST00000573989 ADSSP30520 456 aa13.89□□□□□ -0.19
TRAPPC1-206ENST00000573989 SLC11A1P49279 550 aa13.89□□□□□ -0.19
TRAPPC1-206ENST00000573989 ACOT2P49753 483 aa13.89□□□□□ -0.19
TRAPPC1-206ENST00000573989 SLC10A6Q3KNW5 377 aa13.89□□□□□ -0.19
TRAPPC1-206ENST00000573989 SEZ6Q53EL9 994 aa13.89□□□□□ -0.19
TRAPPC1-206ENST00000573989 TIGD5Q53EQ6 642 aa13.89□□□□□ -0.19
TRAPPC1-206ENST00000573989 GLRA4Q5JXX5 417 aa13.89□□□□□ -0.19
TRAPPC1-206ENST00000573989 GPD1LQ8N335 351 aa13.89□□□□□ -0.19
TRAPPC1-206ENST00000573989 KIAA0895Q8NCT3 520 aa13.89□□□□□ -0.19
TRAPPC1-206ENST00000573989 SPPL3Q8TCT6 385 aa13.89□□□□□ -0.19
TRAPPC1-206ENST00000573989 NOC3LQ8WTT2 800 aaKnown RBP13.89□□□□□ -0.19
TRAPPC1-206ENST00000573989 POF1BQ8WVV4 589 aa13.89□□□□□ -0.19
TRAPPC1-206ENST00000573989 FAM212AQ96EL1 285 aa13.89□□□□□ -0.19
TRAPPC1-206ENST00000573989 IGSF21Q96ID5 467 aa13.89□□□□□ -0.19
TRAPPC1-206ENST00000573989 PPP1R10Q96QC0 940 aaKnown RBP13.89□□□□□ -0.19
TRAPPC1-206ENST00000573989 ASB7Q9H672 318 aa13.89□□□□□ -0.19
TRAPPC1-206ENST00000573989 TLR9Q9NR96 1032 aa13.89□□□□□ -0.19
TRAPPC1-206ENST00000573989 PCDHA5Q9Y5H7 936 aa13.89□□□□□ -0.19
TRAPPC1-206ENST00000573989 ANK1P16157 1881 aa13.89□□□□□ -0.19
TRAPPC1-206ENST00000573989 TTC26A0AVF1 554 aa13.88□□□□□ -0.19
TRAPPC1-206ENST00000573989 TISP43B9A030 160 aa13.88□□□□□ -0.19
TRAPPC1-206ENST00000573989 PDXKO00764 312 aa13.88□□□□□ -0.19
TRAPPC1-206ENST00000573989 GRM6O15303 877 aa13.88□□□□□ -0.19
TRAPPC1-206ENST00000573989 CALUO43852 315 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC1-206ENST00000573989 FAM189A1O60320 539 aa13.88□□□□□ -0.19
TRAPPC1-206ENST00000573989 IL18RAPO95256 599 aa13.88□□□□□ -0.19
TRAPPC1-206ENST00000573989 PBX3P40426 434 aa13.88□□□□□ -0.19
TRAPPC1-206ENST00000573989 PPP1R2P41236 205 aa13.88□□□□□ -0.19
TRAPPC1-206ENST00000573989 TNFSF9P41273 254 aa13.88□□□□□ -0.19
TRAPPC1-206ENST00000573989 STIM1Q13586 685 aa13.88□□□□□ -0.19
TRAPPC1-206ENST00000573989 ADGRE1Q14246 886 aa13.88□□□□□ -0.19
TRAPPC1-206ENST00000573989 ZNF658Q5TYW1 1059 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC1-206ENST00000573989 NT5DC4Q86YG4 428 aa13.88□□□□□ -0.19
TRAPPC1-206ENST00000573989 GUF1Q8N442 669 aaKnown RBP13.88□□□□□ -0.19
TRAPPC1-206ENST00000573989 SPATA20Q8TB22 786 aa13.88□□□□□ -0.19
TRAPPC1-206ENST00000573989 MICAL1Q8TDZ2 1067 aa13.88□□□□□ -0.19
TRAPPC1-206ENST00000573989 KIF12Q96FN5 646 aa13.88□□□□□ -0.19
TRAPPC1-206ENST00000573989 DDX27Q96GQ7 796 aaKnown RBP13.88□□□□□ -0.19
TRAPPC1-206ENST00000573989 CBWD1Q9BRT8 395 aa13.88□□□□□ -0.19
TRAPPC1-206ENST00000573989 FAM213AQ9BRX8 229 aa13.88□□□□□ -0.19
TRAPPC1-206ENST00000573989 PCIF1Q9H4Z3 704 aa13.88□□□□□ -0.19
TRAPPC1-206ENST00000573989 AGPAT3Q9NRZ7 376 aa13.88□□□□□ -0.19
TRAPPC1-206ENST00000573989 LMBRD1Q9NUN5 540 aa13.88□□□□□ -0.19
TRAPPC1-206ENST00000573989 UBQLN1Q9UMX0 589 aaKnown RBP13.88□□□□□ -0.19
TRAPPC1-206ENST00000573989 PRG3Q9Y2Y8 225 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC1-206ENST00000573989 DERAQ9Y315 318 aa13.88□□□□□ -0.19
TRAPPC1-206ENST00000573989 MTCH2Q9Y6C9 303 aa13.88□□□□□ -0.19
TRAPPC1-206ENST00000573989 PRRC2BQ5JSZ5 2229 aaKnown RBP13.88□□□□□ -0.19
TRAPPC1-206ENST00000573989 CHD7Q9P2D1 2997 aa13.88□□□□□ -0.19
TRAPPC1-206ENST00000573989 CASTOR2A6NHX0 329 aa13.87□□□□□ -0.19
TRAPPC1-206ENST00000573989 ZNF233A6NK53 670 aa13.87□□□□□ -0.19
TRAPPC1-206ENST00000573989 LACTBL1A8MY62 500 aa13.87□□□□□ -0.19
TRAPPC1-206ENST00000573989 TADA2AO75478 443 aa13.87□□□□□ -0.19
TRAPPC1-206ENST00000573989 ADRB2P07550 413 aa13.87□□□□□ -0.19
TRAPPC1-206ENST00000573989 CYP3A5P20815 502 aa13.87□□□□□ -0.19
TRAPPC1-206ENST00000573989 RPL9P32969 192 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms