RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 SAFBQ15424 915 aaKnown RBP eCLIP24.25■■□□□ 1.47
SNF8-216ENST00000573795 CEP57Q86XR8 500 aa24.25■■□□□ 1.47
SNF8-216ENST00000573795 CCDC83Q8IWF9 413 aa24.25■■□□□ 1.47
SNF8-216ENST00000573795 C4orf32Q8N8J7 132 aa24.25■■□□□ 1.47
SNF8-216ENST00000573795 C8orf76Q96K31 380 aa24.25■■□□□ 1.47
SNF8-216ENST00000573795 NUMBLQ9Y6R0 609 aa24.25■■□□□ 1.47
SNF8-216ENST00000573795 ZNF292O60281 2723 aa24.25■■□□□ 1.47
SNF8-216ENST00000573795 LIG1P18858 919 aa24.24■■□□□ 1.47
SNF8-216ENST00000573795 NT5DC1Q5TFE4 455 aa24.24■■□□□ 1.47
SNF8-216ENST00000573795 CD300LGQ6UXG3 332 aa24.24■■□□□ 1.47
SNF8-216ENST00000573795 GRASPQ7Z6J2 395 aaPredicted RBP24.24■■□□□ 1.47
SNF8-216ENST00000573795 ERMNQ8TAM6 284 aa24.24■■□□□ 1.47
SNF8-216ENST00000573795 DEPTORQ8TB45 409 aa24.24■■□□□ 1.47
SNF8-216ENST00000573795 NKD2Q969F2 451 aaPredicted RBP24.24■■□□□ 1.47
SNF8-216ENST00000573795 RPP25Q9BUL9 199 aaKnown RBP24.24■■□□□ 1.47
SNF8-216ENST00000573795 FOXP1Q9H334 677 aaPredicted RBP24.24■■□□□ 1.47
SNF8-216ENST00000573795 TBC1D17Q9HA65 648 aa24.24■■□□□ 1.47
SNF8-216ENST00000573795 GDAQ9Y2T3 454 aa24.24■■□□□ 1.47
SNF8-216ENST00000573795 COL4A3Q01955 1670 aa24.24■■□□□ 1.47
SNF8-216ENST00000573795 C8AP07357 584 aa24.23■■□□□ 1.47
SNF8-216ENST00000573795 MUTP22033 750 aa24.23■■□□□ 1.47
SNF8-216ENST00000573795 FSHRP23945 695 aa24.23■■□□□ 1.47
SNF8-216ENST00000573795 NBR1Q14596 966 aa24.23■■□□□ 1.47
SNF8-216ENST00000573795 TMEM132AQ24JP5 1023 aa24.23■■□□□ 1.47
SNF8-216ENST00000573795 TTC38Q5R3I4 469 aa24.23■■□□□ 1.47
SNF8-216ENST00000573795 SNX27Q96L92 541 aa24.23■■□□□ 1.47
SNF8-216ENST00000573795 PPP1R10Q96QC0 940 aaKnown RBP24.23■■□□□ 1.47
SNF8-216ENST00000573795 ADPGKQ9BRR6 497 aa24.23■■□□□ 1.47
SNF8-216ENST00000573795 SLC2A4RGQ9NR83 387 aa24.23■■□□□ 1.47
SNF8-216ENST00000573795 TMEM189-UBE2V1I3L0A0 370 aa24.22■■□□□ 1.47
SNF8-216ENST00000573795 NEFLP07196 543 aa24.22■■□□□ 1.47
SNF8-216ENST00000573795 HNRNPA1P09651 372 aaKnown RBP eCLIP24.22■■□□□ 1.47
SNF8-216ENST00000573795 PPP2R5AQ15172 486 aa24.22■■□□□ 1.47
SNF8-216ENST00000573795 DCAF4L1Q3SXM0 396 aa24.22■■□□□ 1.47
SNF8-216ENST00000573795 GLRA4Q5JXX5 417 aa24.22■■□□□ 1.47
SNF8-216ENST00000573795 RSPO2Q6UXX9 243 aaPredicted RBP24.22■■□□□ 1.47
SNF8-216ENST00000573795 FBXO18Q8NFZ0 1043 aa24.22■■□□□ 1.47
SNF8-216ENST00000573795 FGF14Q92915 247 aa24.22■■□□□ 1.47
SNF8-216ENST00000573795 BHMT2Q9H2M3 363 aa24.22■■□□□ 1.47
SNF8-216ENST00000573795 ARHGEF3Q9NR81 526 aa24.22■■□□□ 1.47
SNF8-216ENST00000573795 PPP4R2Q9NY27 417 aa24.22■■□□□ 1.47
SNF8-216ENST00000573795 DLGAP2Q9P1A6 1054 aa24.22■■□□□ 1.47
SNF8-216ENST00000573795 LIMCH1Q9UPQ0 1083 aa24.22■■□□□ 1.47
SNF8-216ENST00000573795 FRYLO94915 3013 aa24.21■■□□□ 1.47
SNF8-216ENST00000573795 FGFR3P22607 806 aa24.21■■□□□ 1.47
SNF8-216ENST00000573795 HOXA9P31269 272 aa24.21■■□□□ 1.47
SNF8-216ENST00000573795 FXR2P51116 673 aaKnown RBP eCLIP24.21■■□□□ 1.47
SNF8-216ENST00000573795 ELAVL2Q12926 359 aaKnown RBP24.21■■□□□ 1.47
SNF8-216ENST00000573795 PPM1LQ5SGD2 360 aa24.21■■□□□ 1.47
SNF8-216ENST00000573795 LIN9Q5TKA1 542 aa24.21■■□□□ 1.47
SNF8-216ENST00000573795 HAUS3Q68CZ6 603 aa24.21■■□□□ 1.47
SNF8-216ENST00000573795 PHLDB3Q6NSJ2 640 aa24.21■■□□□ 1.47
SNF8-216ENST00000573795 PARM1Q6UWI2 310 aa24.21■■□□□ 1.47
SNF8-216ENST00000573795 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.21■■□□□ 1.47
SNF8-216ENST00000573795 LLPHQ9BRT6 129 aaKnown RBP24.21■■□□□ 1.47
SNF8-216ENST00000573795 CDH7Q9ULB5 785 aa24.21■■□□□ 1.47
SNF8-216ENST00000573795 ZFP37Q9Y6Q3 630 aaPredicted RBP24.21■■□□□ 1.47
SNF8-216ENST00000573795 STK25O00506 426 aa24.2■■□□□ 1.46
SNF8-216ENST00000573795 CCL16O15467 120 aa24.2■■□□□ 1.46
SNF8-216ENST00000573795 CCT6AP40227 531 aaKnown RBP24.2■■□□□ 1.46
SNF8-216ENST00000573795 RBM25P49756 843 aaKnown RBP24.2■■□□□ 1.46
SNF8-216ENST00000573795 CLCNKBP51801 687 aa24.2■■□□□ 1.46
SNF8-216ENST00000573795 RAB33AQ14088 237 aa24.2■■□□□ 1.46
SNF8-216ENST00000573795 ATF7IP2Q5U623 682 aa24.2■■□□□ 1.46
SNF8-216ENST00000573795 CEP120Q8N960 986 aa24.2■■□□□ 1.46
SNF8-216ENST00000573795 C3orf58Q8NDZ4 430 aa24.2■■□□□ 1.46
SNF8-216ENST00000573795 GOLGA2P5Q9HBQ8 144 aa24.2■■□□□ 1.46
SNF8-216ENST00000573795 MTRRQ9UBK8 725 aa24.2■■□□□ 1.46
SNF8-216ENST00000573795 FANCMQ8IYD8 2048 aa24.19■■□□□ 1.46
SNF8-216ENST00000573795 POU2F2P09086 479 aa24.19■■□□□ 1.46
SNF8-216ENST00000573795 OR1D2P34982 312 aa24.19■■□□□ 1.46
SNF8-216ENST00000573795 EFNA5P52803 228 aa24.19■■□□□ 1.46
SNF8-216ENST00000573795 ITFG1Q8TB96 612 aa24.19■■□□□ 1.46
SNF8-216ENST00000573795 SLC7A14Q8TBB6 771 aa24.19■■□□□ 1.46
SNF8-216ENST00000573795 KIFAP3Q92845 792 aa24.19■■□□□ 1.46
SNF8-216ENST00000573795 FGF13Q92913 245 aa24.19■■□□□ 1.46
SNF8-216ENST00000573795 IFT74Q96LB3 600 aa24.19■■□□□ 1.46
SNF8-216ENST00000573795 KIAA1024Q9UPX6 916 aa24.19■■□□□ 1.46
SNF8-216ENST00000573795 DMXL1Q9Y485 3027 aa24.19■■□□□ 1.46
SNF8-216ENST00000573795 DCNP07585 359 aaKnown RBP24.18■■□□□ 1.46
SNF8-216ENST00000573795 TRAPPC10P48553 1259 aa24.18■■□□□ 1.46
SNF8-216ENST00000573795 SOX4Q06945 474 aaPredicted RBP24.18■■□□□ 1.46
SNF8-216ENST00000573795 UPP1Q16831 310 aa24.18■■□□□ 1.46
SNF8-216ENST00000573795 AXDND1Q5T1B0 1012 aaPredicted RBP24.18■■□□□ 1.46
SNF8-216ENST00000573795 PDXDC1Q6P996 788 aa24.18■■□□□ 1.46
SNF8-216ENST00000573795 TAS1R3Q7RTX0 852 aa24.18■■□□□ 1.46
SNF8-216ENST00000573795 DAW1Q8N136 415 aa24.18■■□□□ 1.46
SNF8-216ENST00000573795 ADSSL1Q8N142 457 aa24.18■■□□□ 1.46
SNF8-216ENST00000573795 DDX27Q96GQ7 796 aaKnown RBP24.18■■□□□ 1.46
SNF8-216ENST00000573795 DDX19AQ9NUU7 478 aaKnown RBP24.18■■□□□ 1.46
SNF8-216ENST00000573795 HCFC1R1Q9NWW0 138 aa24.18■■□□□ 1.46
SNF8-216ENST00000573795 LRWD1Q9UFC0 647 aa24.18■■□□□ 1.46
SNF8-216ENST00000573795 TNFSF13BQ9Y275 285 aa24.18■■□□□ 1.46
SNF8-216ENST00000573795 MIA3Q5JRA6 1907 aa24.18■■□□□ 1.46
SNF8-216ENST00000573795 B3GAT3O94766 335 aa24.17■■□□□ 1.46
SNF8-216ENST00000573795 GLULP15104 373 aa24.17■■□□□ 1.46
SNF8-216ENST00000573795 RFX1P22670 979 aa24.17■■□□□ 1.46
SNF8-216ENST00000573795 TKTP29401 623 aaKnown RBP24.17■■□□□ 1.46
SNF8-216ENST00000573795 TOB1P50616 345 aaPredicted RBP24.17■■□□□ 1.46
SNF8-216ENST00000573795 GPC5P78333 572 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms