RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 MAPK7Q13164 816 aa10.59□□□□□ -0.71
NPLOC4-212ENST00000573328 DHX8Q14562 1220 aaKnown RBP10.59□□□□□ -0.71
NPLOC4-212ENST00000573328 PSMD5Q16401 504 aa10.59□□□□□ -0.71
NPLOC4-212ENST00000573328 FAM171A1Q5VUB5 890 aa10.59□□□□□ -0.71
NPLOC4-212ENST00000573328 PRSS55Q6UWB4 352 aaPredicted RBP10.59□□□□□ -0.71
NPLOC4-212ENST00000573328 C15orf39Q6ZRI6 1047 aa10.59□□□□□ -0.71
NPLOC4-212ENST00000573328 C1orf186Q6ZWK4 172 aa10.59□□□□□ -0.71
NPLOC4-212ENST00000573328 OTOP3Q7RTS5 596 aa10.59□□□□□ -0.71
NPLOC4-212ENST00000573328 BRAPQ7Z569 592 aa10.59□□□□□ -0.71
NPLOC4-212ENST00000573328 DAW1Q8N136 415 aa10.59□□□□□ -0.71
NPLOC4-212ENST00000573328 CEP120Q8N960 986 aa10.59□□□□□ -0.71
NPLOC4-212ENST00000573328 FEZF2Q8TBJ5 459 aa10.59□□□□□ -0.71
NPLOC4-212ENST00000573328 SMG7Q92540 1137 aaKnown RBP10.59□□□□□ -0.71
NPLOC4-212ENST00000573328 BICD1Q96G01 975 aa10.59□□□□□ -0.71
NPLOC4-212ENST00000573328 PNMA5Q96PV4 448 aa10.59□□□□□ -0.71
NPLOC4-212ENST00000573328 ACO2Q99798 780 aaKnown RBP10.59□□□□□ -0.71
NPLOC4-212ENST00000573328 TTPALQ9BTX7 342 aa10.59□□□□□ -0.71
NPLOC4-212ENST00000573328 TARS2Q9BW92 718 aaKnown RBP10.59□□□□□ -0.71
NPLOC4-212ENST00000573328 CDT1Q9H211 546 aa10.59□□□□□ -0.71
NPLOC4-212ENST00000573328 CXCL16Q9H2A7 254 aa10.59□□□□□ -0.71
NPLOC4-212ENST00000573328 TMEM134Q9H6X4 195 aa10.59□□□□□ -0.71
NPLOC4-212ENST00000573328 C17orf75Q9HAS0 396 aa10.59□□□□□ -0.71
NPLOC4-212ENST00000573328 RXFP1Q9HBX9 757 aa10.59□□□□□ -0.71
NPLOC4-212ENST00000573328 CHST7Q9NS84 486 aa10.59□□□□□ -0.71
NPLOC4-212ENST00000573328 ARHGAP28Q9P2N2 729 aa10.59□□□□□ -0.71
NPLOC4-212ENST00000573328 USTQ9Y2C2 406 aa10.59□□□□□ -0.71
NPLOC4-212ENST00000573328 ARIH1Q9Y4X5 557 aaPredicted RBP10.59□□□□□ -0.71
NPLOC4-212ENST00000573328 TGM5O43548 720 aa10.58□□□□□ -0.72
NPLOC4-212ENST00000573328 EFEMP2O95967 443 aa10.58□□□□□ -0.72
NPLOC4-212ENST00000573328 BMP15O95972 392 aa10.58□□□□□ -0.72
NPLOC4-212ENST00000573328 KRT18P05783 430 aaKnown RBP10.58□□□□□ -0.72
NPLOC4-212ENST00000573328 PLS3P13797 630 aa10.58□□□□□ -0.72
NPLOC4-212ENST00000573328 PDCP20941 246 aa10.58□□□□□ -0.72
NPLOC4-212ENST00000573328 GUCY2CP25092 1073 aa10.58□□□□□ -0.72
NPLOC4-212ENST00000573328 GBP2P32456 591 aaPredicted RBP10.58□□□□□ -0.72
NPLOC4-212ENST00000573328 GRM5P41594 1212 aa10.58□□□□□ -0.72
NPLOC4-212ENST00000573328 CLCNKBP51801 687 aa10.58□□□□□ -0.72
NPLOC4-212ENST00000573328 RTP2Q5QGT7 225 aa10.58□□□□□ -0.72
NPLOC4-212ENST00000573328 HYIQ5T013 277 aa10.58□□□□□ -0.72
NPLOC4-212ENST00000573328 LIN9Q5TKA1 542 aa10.58□□□□□ -0.72
NPLOC4-212ENST00000573328 MPZL3Q6UWV2 235 aa10.58□□□□□ -0.72
NPLOC4-212ENST00000573328 GPBP1Q86WP2 473 aa10.58□□□□□ -0.72
NPLOC4-212ENST00000573328 UBALD2Q8IYN6 164 aa10.58□□□□□ -0.72
NPLOC4-212ENST00000573328 ZDHHC14Q8IZN3 488 aa10.58□□□□□ -0.72
NPLOC4-212ENST00000573328 FBXL6Q8N531 539 aa10.58□□□□□ -0.72
NPLOC4-212ENST00000573328 SYT2Q8N9I0 419 aaPredicted RBP10.58□□□□□ -0.72
NPLOC4-212ENST00000573328 STAMQ92783 540 aa10.58□□□□□ -0.72
NPLOC4-212ENST00000573328 AK8Q96MA6 479 aa10.58□□□□□ -0.72
NPLOC4-212ENST00000573328 PLEKHA4Q9H4M7 779 aa10.58□□□□□ -0.72
NPLOC4-212ENST00000573328 GOLGA2P5Q9HBQ8 144 aa10.58□□□□□ -0.72
NPLOC4-212ENST00000573328 FNIP2Q9P278 1114 aa10.58□□□□□ -0.72
NPLOC4-212ENST00000573328 DAXXQ9UER7 740 aaPredicted RBP10.58□□□□□ -0.72
NPLOC4-212ENST00000573328 LIMD1Q9UGP4 676 aa10.58□□□□□ -0.72
NPLOC4-212ENST00000573328 KCNG1Q9UIX4 513 aa10.58□□□□□ -0.72
NPLOC4-212ENST00000573328 ZDBF2Q9HCK1 2354 aa10.58□□□□□ -0.72
NPLOC4-212ENST00000573328 CLUHO75153 1309 aa10.58□□□□□ -0.72
NPLOC4-212ENST00000573328 NPHP3-ACAD11A0A0J9YXS1 232 aa10.57□□□□□ -0.72
NPLOC4-212ENST00000573328 H0YCG3 227 aa10.57□□□□□ -0.72
NPLOC4-212ENST00000573328 TRAPPC3O43617 180 aa10.57□□□□□ -0.72
NPLOC4-212ENST00000573328 B3GAT3O94766 335 aa10.57□□□□□ -0.72
NPLOC4-212ENST00000573328 FAM13AO94988 1023 aa10.57□□□□□ -0.72
NPLOC4-212ENST00000573328 BRD1O95696 1058 aa10.57□□□□□ -0.72
NPLOC4-212ENST00000573328 MCF2P10911 925 aa10.57□□□□□ -0.72
NPLOC4-212ENST00000573328 SLC12A3P55017 1021 aa10.57□□□□□ -0.72
NPLOC4-212ENST00000573328 NOLC1Q14978 699 aaKnown RBP eCLIP10.57□□□□□ -0.72
NPLOC4-212ENST00000573328 SF3A1Q15459 793 aaKnown RBP10.57□□□□□ -0.72
NPLOC4-212ENST00000573328 NAB2Q15742 525 aa10.57□□□□□ -0.72
NPLOC4-212ENST00000573328 TMEM119Q4V9L6 283 aa10.57□□□□□ -0.72
NPLOC4-212ENST00000573328 PDXDC1Q6P996 788 aa10.57□□□□□ -0.72
NPLOC4-212ENST00000573328 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.57□□□□□ -0.72
NPLOC4-212ENST00000573328 TAS1R3Q7RTX0 852 aa10.57□□□□□ -0.72
NPLOC4-212ENST00000573328 BMP8AQ7Z5Y6 402 aa10.57□□□□□ -0.72
NPLOC4-212ENST00000573328 GPR65Q8IYL9 337 aa10.57□□□□□ -0.72
NPLOC4-212ENST00000573328 KCTD17Q8N5Z5 321 aa10.57□□□□□ -0.72
NPLOC4-212ENST00000573328 CMASQ8NFW8 434 aaPredicted RBP10.57□□□□□ -0.72
NPLOC4-212ENST00000573328 HDAC7Q8WUI4 952 aa10.57□□□□□ -0.72
NPLOC4-212ENST00000573328 PIK3R5Q8WYR1 880 aa10.57□□□□□ -0.72
NPLOC4-212ENST00000573328 UROC1Q96N76 676 aa10.57□□□□□ -0.72
NPLOC4-212ENST00000573328 ACAP3Q96P50 834 aa10.57□□□□□ -0.72
NPLOC4-212ENST00000573328 PPP1R10Q96QC0 940 aaKnown RBP10.57□□□□□ -0.72
NPLOC4-212ENST00000573328 ZHX3Q9H4I2 956 aa10.57□□□□□ -0.72
NPLOC4-212ENST00000573328 SLC38A7Q9NVC3 462 aa10.57□□□□□ -0.72
NPLOC4-212ENST00000573328 KCND2Q9NZV8 630 aa10.57□□□□□ -0.72
NPLOC4-212ENST00000573328 LARSQ9P2J5 1176 aaKnown RBP10.57□□□□□ -0.72
NPLOC4-212ENST00000573328 SMIM28A0A1B0GU29 152 aa10.56□□□□□ -0.72
NPLOC4-212ENST00000573328 K7ENM7 598 aa10.56□□□□□ -0.72
NPLOC4-212ENST00000573328 SLC26A4O43511 780 aa10.56□□□□□ -0.72
NPLOC4-212ENST00000573328 TBCAO75347 108 aaKnown RBP10.56□□□□□ -0.72
NPLOC4-212ENST00000573328 PLCG1P19174 1290 aa10.56□□□□□ -0.72
NPLOC4-212ENST00000573328 LONP1P36776 959 aaKnown RBP10.56□□□□□ -0.72
NPLOC4-212ENST00000573328 KARSQ15046 597 aaKnown RBP10.56□□□□□ -0.72
NPLOC4-212ENST00000573328 CYP26C1Q6V0L0 522 aa10.56□□□□□ -0.72
NPLOC4-212ENST00000573328 GET4Q7L5D6 327 aaPredicted RBP10.56□□□□□ -0.72
NPLOC4-212ENST00000573328 TMEM161BQ8NDZ6 487 aa10.56□□□□□ -0.72
NPLOC4-212ENST00000573328 SPIRE2Q8WWL2 714 aa10.56□□□□□ -0.72
NPLOC4-212ENST00000573328 ASIC4Q96FT7 647 aa10.56□□□□□ -0.72
NPLOC4-212ENST00000573328 ZBTB45Q96K62 511 aaPredicted RBP10.56□□□□□ -0.72
NPLOC4-212ENST00000573328 SNX27Q96L92 541 aa10.56□□□□□ -0.72
NPLOC4-212ENST00000573328 REEP2Q9BRK0 252 aa10.56□□□□□ -0.72
NPLOC4-212ENST00000573328 KCNH6Q9H252 994 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms