RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 MYBPC2Q14324 1141 aa15.78■□□□□ 0.12
NPLOC4-209ENST00000572760 STX1AQ16623 288 aa15.78■□□□□ 0.12
NPLOC4-209ENST00000572760 EDRF1Q3B7T1 1238 aa15.78■□□□□ 0.12
NPLOC4-209ENST00000572760 SLC10A6Q3KNW5 377 aa15.78■□□□□ 0.12
NPLOC4-209ENST00000572760 ANKRD40Q6AI12 368 aa15.78■□□□□ 0.12
NPLOC4-209ENST00000572760 SLC9A9Q8IVB4 645 aa15.78■□□□□ 0.12
NPLOC4-209ENST00000572760 CD302Q8IX05 232 aa15.78■□□□□ 0.12
NPLOC4-209ENST00000572760 SNX27Q96L92 541 aa15.78■□□□□ 0.12
NPLOC4-209ENST00000572760 SLC28A3Q9HAS3 691 aa15.78■□□□□ 0.12
NPLOC4-209ENST00000572760 PLEKHA5Q9HAU0 1116 aa15.78■□□□□ 0.12
NPLOC4-209ENST00000572760 TBC1D13Q9NVG8 400 aa15.78■□□□□ 0.12
NPLOC4-209ENST00000572760 ANO10Q9NW15 660 aa15.78■□□□□ 0.12
NPLOC4-209ENST00000572760 MIOSQ9NXC5 875 aa15.78■□□□□ 0.12
NPLOC4-209ENST00000572760 RBAKQ9NYW8 714 aaPredicted RBP15.78■□□□□ 0.12
NPLOC4-209ENST00000572760 LCHNA4D1U4 455 aa15.77■□□□□ 0.12
NPLOC4-209ENST00000572760 TRIM49BA6NDI0 452 aa15.77■□□□□ 0.12
NPLOC4-209ENST00000572760 FAM189A1O60320 539 aa15.77■□□□□ 0.12
NPLOC4-209ENST00000572760 IL18RAPO95256 599 aa15.77■□□□□ 0.12
NPLOC4-209ENST00000572760 DNAJB2P25686 324 aa15.77■□□□□ 0.12
NPLOC4-209ENST00000572760 FKBP3Q00688 224 aaKnown RBP15.77■□□□□ 0.12
NPLOC4-209ENST00000572760 POU5F1Q01860 360 aaKnown RBP15.77■□□□□ 0.12
NPLOC4-209ENST00000572760 SURF1Q15526 300 aa15.77■□□□□ 0.12
NPLOC4-209ENST00000572760 ENOX2Q16206 610 aaKnown RBP15.77■□□□□ 0.12
NPLOC4-209ENST00000572760 SNRNP35Q16560 246 aaKnown RBP15.77■□□□□ 0.12
NPLOC4-209ENST00000572760 NFIL3Q16649 462 aa15.77■□□□□ 0.12
NPLOC4-209ENST00000572760 TPD52L1Q16890 204 aaPredicted RBP15.77■□□□□ 0.12
NPLOC4-209ENST00000572760 DPCR1Q3MIW9 517 aa15.77■□□□□ 0.12
NPLOC4-209ENST00000572760 GLRA4Q5JXX5 417 aa15.77■□□□□ 0.12
NPLOC4-209ENST00000572760 CRELD2Q6UXH1 353 aaPredicted RBP15.77■□□□□ 0.12
NPLOC4-209ENST00000572760 CBWD2Q8IUF1 395 aa15.77■□□□□ 0.12
NPLOC4-209ENST00000572760 BRSK2Q8IWQ3 736 aa15.77■□□□□ 0.12
NPLOC4-209ENST00000572760 ZSWIM2Q8NEG5 633 aa15.77■□□□□ 0.12
NPLOC4-209ENST00000572760 SP7Q8TDD2 431 aaPredicted RBP15.77■□□□□ 0.12
NPLOC4-209ENST00000572760 TIFAQ96CG3 184 aa15.77■□□□□ 0.12
NPLOC4-209ENST00000572760 KIF12Q96FN5 646 aa15.77■□□□□ 0.12
NPLOC4-209ENST00000572760 RC3H2Q9HBD1 1191 aaKnown RBP15.77■□□□□ 0.12
NPLOC4-209ENST00000572760 AAASQ9NRG9 546 aa15.77■□□□□ 0.12
NPLOC4-209ENST00000572760 YBX2Q9Y2T7 364 aaKnown RBP15.77■□□□□ 0.12
NPLOC4-209ENST00000572760 MRPL42Q9Y6G3 142 aaKnown RBP15.77■□□□□ 0.12
NPLOC4-209ENST00000572760 SMIM28A0A1B0GU29 152 aa15.76■□□□□ 0.11
NPLOC4-209ENST00000572760 TTC26A0AVF1 554 aa15.76■□□□□ 0.11
NPLOC4-209ENST00000572760 LACTBL1A8MY62 500 aa15.76■□□□□ 0.11
NPLOC4-209ENST00000572760 XPOTO43592 962 aaKnown RBP15.76■□□□□ 0.11
NPLOC4-209ENST00000572760 AFF1P51825 1210 aaKnown RBP15.76■□□□□ 0.11
NPLOC4-209ENST00000572760 SPAG1Q07617 926 aa15.76■□□□□ 0.11
NPLOC4-209ENST00000572760 ZCWPW2Q504Y3 356 aa15.76■□□□□ 0.11
NPLOC4-209ENST00000572760 PPP2R2DQ66LE6 453 aa15.76■□□□□ 0.11
NPLOC4-209ENST00000572760 FNBP1Q96RU3 617 aa15.76■□□□□ 0.11
NPLOC4-209ENST00000572760 ASB7Q9H672 318 aa15.76■□□□□ 0.11
NPLOC4-209ENST00000572760 SLC38A7Q9NVC3 462 aa15.76■□□□□ 0.11
NPLOC4-209ENST00000572760 DMAC2Q9NW81 257 aa15.76■□□□□ 0.11
NPLOC4-209ENST00000572760 RWDD3Q9Y3V2 267 aa15.76■□□□□ 0.11
NPLOC4-209ENST00000572760 COL4A6Q14031 1691 aa15.76■□□□□ 0.11
NPLOC4-209ENST00000572760 SYCE3A1L190 88 aa15.75■□□□□ 0.11
NPLOC4-209ENST00000572760 LINC01553A4QN01 128 aa15.75■□□□□ 0.11
NPLOC4-209ENST00000572760 PTGESO14684 152 aa15.75■□□□□ 0.11
NPLOC4-209ENST00000572760 INPPL1O15357 1258 aa15.75■□□□□ 0.11
NPLOC4-209ENST00000572760 ZC3H11AO75152 810 aaKnown RBP eCLIP15.75■□□□□ 0.115e-14■□□□□ 9.6
NPLOC4-209ENST00000572760 FGFR1OPO95684 399 aaKnown RBP15.75■□□□□ 0.11
NPLOC4-209ENST00000572760 CCDC192P0DO97 292 aa15.75■□□□□ 0.11
NPLOC4-209ENST00000572760 EPB41P11171 864 aaKnown RBP15.75■□□□□ 0.11
NPLOC4-209ENST00000572760 KCNE1P15382 129 aa15.75■□□□□ 0.11
NPLOC4-209ENST00000572760 LAG3P18627 525 aa15.75■□□□□ 0.11
NPLOC4-209ENST00000572760 PSMC2P35998 433 aaKnown RBP15.75■□□□□ 0.11
NPLOC4-209ENST00000572760 CASP4P49662 377 aa15.75■□□□□ 0.11
NPLOC4-209ENST00000572760 PMS1P54277 932 aaKnown RBP15.75■□□□□ 0.11
NPLOC4-209ENST00000572760 TYRO3Q06418 890 aa15.75■□□□□ 0.11
NPLOC4-209ENST00000572760 CT47A1Q5JQC4 288 aaPredicted RBP15.75■□□□□ 0.11
NPLOC4-209ENST00000572760 ALKAL1Q6UXT8 129 aa15.75■□□□□ 0.11
NPLOC4-209ENST00000572760 LRRC55Q6ZSA7 311 aa15.75■□□□□ 0.11
NPLOC4-209ENST00000572760 CSGALNACT2Q8N6G5 542 aa15.75■□□□□ 0.11
NPLOC4-209ENST00000572760 GSTCDQ8NEC7 633 aa15.75■□□□□ 0.11
NPLOC4-209ENST00000572760 FBXL18Q96ME1 805 aa15.75■□□□□ 0.11
NPLOC4-209ENST00000572760 ZNF558Q96NG5 402 aa15.75■□□□□ 0.11
NPLOC4-209ENST00000572760 TSPAN18Q96SJ8 248 aa15.75■□□□□ 0.11
NPLOC4-209ENST00000572760 CXCL16Q9H2A7 254 aa15.75■□□□□ 0.11
NPLOC4-209ENST00000572760 NRDE2Q9H7Z3 1164 aa15.75■□□□□ 0.11
NPLOC4-209ENST00000572760 CNTN3Q9P232 1028 aa15.75■□□□□ 0.11
NPLOC4-209ENST00000572760 RWDD2AQ9UIY3 292 aa15.75■□□□□ 0.11
NPLOC4-209ENST00000572760 PCDHB12Q9Y5F1 795 aa15.75■□□□□ 0.11
NPLOC4-209ENST00000572760 CARNS1A5YM72 827 aa15.74■□□□□ 0.11
NPLOC4-209ENST00000572760 DDHD2O94830 711 aa15.74■□□□□ 0.11
NPLOC4-209ENST00000572760 ALDH2P05091 517 aa15.74■□□□□ 0.11
NPLOC4-209ENST00000572760 ADRB2P07550 413 aa15.74■□□□□ 0.11
NPLOC4-209ENST00000572760 KRT13P13646 458 aa15.74■□□□□ 0.11
NPLOC4-209ENST00000572760 ERCC5P28715 1186 aaPredicted RBP15.74■□□□□ 0.11
NPLOC4-209ENST00000572760 CTNNB1P35222 781 aa15.74■□□□□ 0.11
NPLOC4-209ENST00000572760 OR1G1P47890 313 aa15.74■□□□□ 0.11
NPLOC4-209ENST00000572760 ALDH7A1P49419 539 aaKnown RBP15.74■□□□□ 0.11
NPLOC4-209ENST00000572760 CYP24A1Q07973 514 aa15.74■□□□□ 0.11
NPLOC4-209ENST00000572760 TUSC3Q13454 348 aa15.74■□□□□ 0.11
NPLOC4-209ENST00000572760 TMEM132DQ14C87 1099 aa15.74■□□□□ 0.11
NPLOC4-209ENST00000572760 XKR4Q5GH76 650 aa15.74■□□□□ 0.11
NPLOC4-209ENST00000572760 JADE1Q6IE81 842 aa15.74■□□□□ 0.11
NPLOC4-209ENST00000572760 USP37Q86T82 979 aa15.74■□□□□ 0.11
NPLOC4-209ENST00000572760 ZNF280BQ86YH2 543 aa15.74■□□□□ 0.11
NPLOC4-209ENST00000572760 FAM186BQ8IYM0 893 aa15.74■□□□□ 0.11
NPLOC4-209ENST00000572760 BEST2Q8NFU1 509 aa15.74■□□□□ 0.11
NPLOC4-209ENST00000572760 CACTINQ8WUQ7 758 aaKnown RBP15.74■□□□□ 0.11
NPLOC4-209ENST00000572760 TMEM174Q8WUU8 243 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms