RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 EARS2Q5JPH6 523 aaKnown RBP22■■□□□ 1.11
CCDC40-206ENST00000572083 TPRG1Q6ZUI0 275 aa22■■□□□ 1.11
CCDC40-206ENST00000572083 NPAS3Q8IXF0 933 aa22■■□□□ 1.11
CCDC40-206ENST00000572083 SLFN12Q8IYM2 578 aa22■■□□□ 1.11
CCDC40-206ENST00000572083 OSBPL6Q9BZF3 934 aa22■■□□□ 1.11
CCDC40-206ENST00000572083 ZSWIM6Q9HCJ5 1215 aa22■■□□□ 1.11
CCDC40-206ENST00000572083 VWA8A3KMH1 1905 aa22■■□□□ 1.11
CCDC40-206ENST00000572083 KMT2BQ9UMN6 2715 aaPredicted RBP21.99■■□□□ 1.11
CCDC40-206ENST00000572083 FAM205CA6NFA0 338 aa21.99■■□□□ 1.11
CCDC40-206ENST00000572083 LRRIQ4A6NIV6 560 aa21.99■■□□□ 1.11
CCDC40-206ENST00000572083 PTGESO14684 152 aa21.99■■□□□ 1.11
CCDC40-206ENST00000572083 TARSP26639 723 aaKnown RBP21.99■■□□□ 1.11
CCDC40-206ENST00000572083 PFKPQ01813 784 aa21.99■■□□□ 1.11
CCDC40-206ENST00000572083 PABPC1LQ4VXU2 614 aaKnown RBP21.99■■□□□ 1.11
CCDC40-206ENST00000572083 AXDND1Q5T1B0 1012 aaPredicted RBP21.99■■□□□ 1.11
CCDC40-206ENST00000572083 TSSK4Q6SA08 328 aa21.99■■□□□ 1.11
CCDC40-206ENST00000572083 CENPQQ7L2Z9 268 aaPredicted RBP21.99■■□□□ 1.11
CCDC40-206ENST00000572083 CXCL16Q9H2A7 254 aa21.99■■□□□ 1.11
CCDC40-206ENST00000572083 SPTBN2O15020 2390 aa21.99■■□□□ 1.11
CCDC40-206ENST00000572083 NOTCH4Q99466 2003 aa21.98■■□□□ 1.11
CCDC40-206ENST00000572083 A0A087WWV3 80 aa21.98■■□□□ 1.11
CCDC40-206ENST00000572083 USO1O60763 962 aaKnown RBP21.98■■□□□ 1.11
CCDC40-206ENST00000572083 BAG4O95429 457 aaKnown RBP21.98■■□□□ 1.11
CCDC40-206ENST00000572083 RARRES1P49788 294 aa21.98■■□□□ 1.11
CCDC40-206ENST00000572083 ATXN1P54253 815 aaKnown RBP21.98■■□□□ 1.11
CCDC40-206ENST00000572083 ZBTB41Q5SVQ8 909 aa21.98■■□□□ 1.11
CCDC40-206ENST00000572083 MAEAQ7L5Y9 396 aa21.98■■□□□ 1.11
CCDC40-206ENST00000572083 ZBTB44Q8NCP5 570 aa21.98■■□□□ 1.11
CCDC40-206ENST00000572083 PIGOQ8TEQ8 1089 aa21.98■■□□□ 1.11
CCDC40-206ENST00000572083 NAP1L4Q99733 375 aaKnown RBP21.98■■□□□ 1.11
CCDC40-206ENST00000572083 GPRC5CQ9NQ84 441 aa21.98■■□□□ 1.11
CCDC40-206ENST00000572083 ANKEF1Q9NU02 776 aa21.98■■□□□ 1.11
CCDC40-206ENST00000572083 ZSCAN32Q9NX65 697 aa21.98■■□□□ 1.11
CCDC40-206ENST00000572083 SNTG2Q9NY99 539 aa21.98■■□□□ 1.11
CCDC40-206ENST00000572083 DNMT3BQ9UBC3 853 aaKnown RBP21.98■■□□□ 1.11
CCDC40-206ENST00000572083 CYP46A1Q9Y6A2 500 aa21.98■■□□□ 1.11
CCDC40-206ENST00000572083 TTLL13PA6NNM8 815 aa21.97■■□□□ 1.11
CCDC40-206ENST00000572083 RECQL4O94761 1208 aa21.97■■□□□ 1.11
CCDC40-206ENST00000572083 LYPLA2O95372 231 aa21.97■■□□□ 1.11
CCDC40-206ENST00000572083 THP07101 528 aa21.97■■□□□ 1.11
CCDC40-206ENST00000572083 OR1D2P34982 312 aa21.97■■□□□ 1.11
CCDC40-206ENST00000572083 MAGEA9P43362 315 aa21.97■■□□□ 1.11
CCDC40-206ENST00000572083 RSPO2Q6UXX9 243 aaPredicted RBP21.97■■□□□ 1.11
CCDC40-206ENST00000572083 HSD17B14Q9BPX1 270 aa21.97■■□□□ 1.11
CCDC40-206ENST00000572083 EPC1Q9H2F5 836 aa21.97■■□□□ 1.11
CCDC40-206ENST00000572083 HEBP1Q9NRV9 189 aa21.97■■□□□ 1.11
CCDC40-206ENST00000572083 TPRP12270 2363 aaKnown RBP21.96■■□□□ 1.11
CCDC40-206ENST00000572083 NAB2Q15742 525 aa21.96■■□□□ 1.11
CCDC40-206ENST00000572083 SECISBP2LQ93073 1101 aaKnown RBP21.96■■□□□ 1.11
CCDC40-206ENST00000572083 BORCS6Q96GS4 357 aa21.96■■□□□ 1.11
CCDC40-206ENST00000572083 PLA2G2FQ9BZM2 168 aa21.96■■□□□ 1.11
CCDC40-206ENST00000572083 PDZD7Q9H5P4 517 aa21.96■■□□□ 1.11
CCDC40-206ENST00000572083 PRMT7Q9NVM4 692 aaPredicted RBP21.96■■□□□ 1.11
CCDC40-206ENST00000572083 CDV3Q9UKY7 258 aaKnown RBP21.96■■□□□ 1.11
CCDC40-206ENST00000572083 USP18Q9UMW8 372 aa21.96■■□□□ 1.11
CCDC40-206ENST00000572083 LILRB5O75023 590 aa21.95■■□□□ 1.1
CCDC40-206ENST00000572083 REC8O95072 547 aa21.95■■□□□ 1.1
CCDC40-206ENST00000572083 POU2F2P09086 479 aa21.95■■□□□ 1.1
CCDC40-206ENST00000572083 XBP1P17861 261 aa21.95■■□□□ 1.1
CCDC40-206ENST00000572083 IGFBP6P24592 240 aaPredicted RBP21.95■■□□□ 1.1
CCDC40-206ENST00000572083 SCRN1Q12765 414 aa21.95■■□□□ 1.1
CCDC40-206ENST00000572083 ELAVL2Q12926 359 aaKnown RBP21.95■■□□□ 1.1
CCDC40-206ENST00000572083 RAB33AQ14088 237 aa21.95■■□□□ 1.1
CCDC40-206ENST00000572083 TMEM132AQ24JP5 1023 aa21.95■■□□□ 1.1
CCDC40-206ENST00000572083 SLC5A9Q2M3M2 681 aa21.95■■□□□ 1.1
CCDC40-206ENST00000572083 PDXDC1Q6P996 788 aa21.95■■□□□ 1.1
CCDC40-206ENST00000572083 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.95■■□□□ 1.1
CCDC40-206ENST00000572083 PPP4R3CPQ6ZMV5 832 aa21.95■■□□□ 1.1
CCDC40-206ENST00000572083 GPR161Q8N6U8 529 aaKnown RBP21.95■■□□□ 1.1
CCDC40-206ENST00000572083 NELL1Q92832 810 aa21.95■■□□□ 1.1
CCDC40-206ENST00000572083 CLDN23Q96B33 292 aa21.95■■□□□ 1.1
CCDC40-206ENST00000572083 MCRS1Q96EZ8 462 aa21.95■■□□□ 1.1
CCDC40-206ENST00000572083 PRIMPOLQ96LW4 560 aa21.95■■□□□ 1.1
CCDC40-206ENST00000572083 KCNH3Q9ULD8 1083 aa21.95■■□□□ 1.1
CCDC40-206ENST00000572083 PCDHA12Q9UN75 941 aa21.95■■□□□ 1.1
CCDC40-206ENST00000572083 MRPS23Q9Y3D9 190 aaKnown RBP21.95■■□□□ 1.1
CCDC40-206ENST00000572083 ACACBO00763 2458 aa21.95■■□□□ 1.1
CCDC40-206ENST00000572083 CDKL5O76039 1030 aa21.94■■□□□ 1.1
CCDC40-206ENST00000572083 SDHBP21912 280 aa21.94■■□□□ 1.1
CCDC40-206ENST00000572083 NR5A1Q13285 461 aa21.94■■□□□ 1.1
CCDC40-206ENST00000572083 UVSSAQ2YD98 709 aa21.94■■□□□ 1.1
CCDC40-206ENST00000572083 CDCA2Q69YH5 1023 aaPredicted RBP21.94■■□□□ 1.1
CCDC40-206ENST00000572083 NOSTRINQ8IVI9 506 aa21.94■■□□□ 1.1
CCDC40-206ENST00000572083 PRMT8Q9NR22 394 aaPredicted RBP21.94■■□□□ 1.1
CCDC40-206ENST00000572083 MTRRQ9UBK8 725 aa21.94■■□□□ 1.1
CCDC40-206ENST00000572083 USP20Q9Y2K6 914 aa21.94■■□□□ 1.1
CCDC40-206ENST00000572083 CDY1Q9Y6F8 540 aa21.94■■□□□ 1.1
CCDC40-206ENST00000572083 STK36Q9NRP7 1315 aa21.94■■□□□ 1.1
CCDC40-206ENST00000572083 DCDC2BA2VCK2 349 aa21.93■■□□□ 1.1
CCDC40-206ENST00000572083 N4BP3O15049 544 aa21.93■■□□□ 1.1
CCDC40-206ENST00000572083 NCAM2O15394 837 aa21.93■■□□□ 1.1
CCDC40-206ENST00000572083 ECI2O75521 394 aa21.93■■□□□ 1.1
CCDC40-206ENST00000572083 CEBPBP17676 345 aa21.93■■□□□ 1.1
CCDC40-206ENST00000572083 RPS9P46781 194 aaKnown RBP21.93■■□□□ 1.1
CCDC40-206ENST00000572083 LMNB2Q03252 620 aa21.93■■□□□ 1.1
CCDC40-206ENST00000572083 MTAPQ13126 283 aa21.93■■□□□ 1.1
CCDC40-206ENST00000572083 CALCRLQ16602 461 aa21.93■■□□□ 1.1
CCDC40-206ENST00000572083 POTEHQ6S545 545 aa21.93■■□□□ 1.1
CCDC40-206ENST00000572083 ZNF852Q6ZMS4 543 aa21.93■■□□□ 1.1
CCDC40-206ENST00000572083 ZBTB8OSQ8IWT0 167 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms