RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 MADDQ8WXG6 1647 aa4.72□□□□□ -1.65
CDC27-213ENST00000571643 PRAMEF4O60810 478 aa4.72□□□□□ -1.65
CDC27-213ENST00000571643 RAMP2O60895 175 aa4.72□□□□□ -1.65
CDC27-213ENST00000571643 ITGB1P05556 798 aa4.72□□□□□ -1.65
CDC27-213ENST00000571643 HK1P19367 917 aa4.72□□□□□ -1.65
CDC27-213ENST00000571643 HSD3B2P26439 372 aa4.72□□□□□ -1.65
CDC27-213ENST00000571643 KRTAP1-1Q07627 177 aa4.72□□□□□ -1.65
CDC27-213ENST00000571643 FAPQ12884 760 aa4.72□□□□□ -1.65
CDC27-213ENST00000571643 LY6G5CQ5SRR4 150 aa4.72□□□□□ -1.65
CDC27-213ENST00000571643 CCDC62Q6P9F0 684 aa4.72□□□□□ -1.65
CDC27-213ENST00000571643 FAM180AQ6UWF9 173 aa4.72□□□□□ -1.65
CDC27-213ENST00000571643 HDGFL2Q7Z4V5 671 aaPredicted RBP4.72□□□□□ -1.65
CDC27-213ENST00000571643 RNF180Q86T96 592 aa4.72□□□□□ -1.65
CDC27-213ENST00000571643 LDLRAD3Q86YD5 345 aa4.72□□□□□ -1.65
CDC27-213ENST00000571643 ANKRD13AQ8IZ07 590 aa4.72□□□□□ -1.65
CDC27-213ENST00000571643 LARP4BQ92615 738 aaKnown RBP4.72□□□□□ -1.65
CDC27-213ENST00000571643 SLC46A2Q9BY10 475 aa4.72□□□□□ -1.65
CDC27-213ENST00000571643 ANO3Q9BYT9 981 aa4.72□□□□□ -1.65
CDC27-213ENST00000571643 CAAP1Q9H8G2 361 aa4.72□□□□□ -1.65
CDC27-213ENST00000571643 GPRC5BQ9NZH0 403 aa4.72□□□□□ -1.65
CDC27-213ENST00000571643 EVLQ9UI08 416 aaPredicted RBP4.72□□□□□ -1.65
CDC27-213ENST00000571643 EIF2B4Q9UI10 523 aaKnown RBP4.72□□□□□ -1.65
CDC27-213ENST00000571643 TMPRSS11EQ9UL52 423 aa4.72□□□□□ -1.65
CDC27-213ENST00000571643 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.72□□□□□ -1.65
CDC27-213ENST00000571643 SORCS3Q9UPU3 1222 aa4.72□□□□□ -1.65
CDC27-213ENST00000571643 SIGLEC1Q9BZZ2 1709 aa4.72□□□□□ -1.65
CDC27-213ENST00000571643 RNF17Q9BXT8 1623 aaKnown RBP4.72□□□□□ -1.65
CDC27-213ENST00000571643 KDM5DQ9BY66 1539 aa4.72□□□□□ -1.65
CDC27-213ENST00000571643 RRBP1Q9P2E9 1410 aaKnown RBP4.72□□□□□ -1.65
CDC27-213ENST00000571643 ZC3H13Q5T200 1668 aaKnown RBP4.71□□□□□ -1.66
CDC27-213ENST00000571643 RIMS1Q86UR5 1692 aaKnown RBP4.71□□□□□ -1.66
CDC27-213ENST00000571643 KIF3BO15066 747 aa4.71□□□□□ -1.66
CDC27-213ENST00000571643 FAM20BO75063 409 aa4.71□□□□□ -1.66
CDC27-213ENST00000571643 RPS6KA4O75676 772 aa4.71□□□□□ -1.66
CDC27-213ENST00000571643 STC2O76061 302 aa4.71□□□□□ -1.66
CDC27-213ENST00000571643 RHOBTB3O94955 611 aa4.71□□□□□ -1.66
CDC27-213ENST00000571643 ABHD16AO95870 558 aa4.71□□□□□ -1.66
CDC27-213ENST00000571643 MTHFD2P13995 350 aa4.71□□□□□ -1.66
CDC27-213ENST00000571643 ENPP1P22413 925 aa4.71□□□□□ -1.66
CDC27-213ENST00000571643 CRHR1P34998 444 aa4.71□□□□□ -1.66
CDC27-213ENST00000571643 GYS2P54840 703 aa4.71□□□□□ -1.66
CDC27-213ENST00000571643 APBA1Q02410 837 aa4.71□□□□□ -1.66
CDC27-213ENST00000571643 PTPAQ15257 358 aa4.71□□□□□ -1.66
CDC27-213ENST00000571643 FSCN1Q16658 493 aaKnown RBP4.71□□□□□ -1.66
CDC27-213ENST00000571643 UGT8Q16880 541 aa4.71□□□□□ -1.66
CDC27-213ENST00000571643 FAM214AQ32MH5 1076 aa4.71□□□□□ -1.66
CDC27-213ENST00000571643 DRICH1Q6PGQ1 229 aaPredicted RBP4.71□□□□□ -1.66
CDC27-213ENST00000571643 KCNV1Q6PIU1 500 aa4.71□□□□□ -1.66
CDC27-213ENST00000571643 TICAM2Q86XR7 235 aa4.71□□□□□ -1.66
CDC27-213ENST00000571643 THNSL2Q86YJ6 484 aa4.71□□□□□ -1.66
CDC27-213ENST00000571643 CERS3Q8IU89 383 aa4.71□□□□□ -1.66
CDC27-213ENST00000571643 SLC41A1Q8IVJ1 513 aa4.71□□□□□ -1.66
CDC27-213ENST00000571643 MSL3Q8N5Y2 521 aaKnown RBP4.71□□□□□ -1.66
CDC27-213ENST00000571643 CPT1CQ8TCG5 803 aa4.71□□□□□ -1.66
CDC27-213ENST00000571643 CHAC2Q8WUX2 184 aa4.71□□□□□ -1.66
CDC27-213ENST00000571643 ZNF480Q8WV37 535 aa4.71□□□□□ -1.66
CDC27-213ENST00000571643 SNX33Q8WV41 574 aa4.71□□□□□ -1.66
CDC27-213ENST00000571643 KCTD10Q9H3F6 313 aa4.71□□□□□ -1.66
CDC27-213ENST00000571643 ZMYM3Q14202 1370 aa4.7□□□□□ -1.66
CDC27-213ENST00000571643 KANK1Q14678 1352 aa4.7□□□□□ -1.66
CDC27-213ENST00000571643 KIF15Q9NS87 1388 aa4.7□□□□□ -1.66
CDC27-213ENST00000571643 TLDC2A0PJX2 215 aa4.7□□□□□ -1.66
CDC27-213ENST00000571643 GAGE12BA1L429 117 aa4.7□□□□□ -1.66
CDC27-213ENST00000571643 GAGE12HA6NDE8 117 aa4.7□□□□□ -1.66
CDC27-213ENST00000571643 GRXCR1A8MXD5 290 aa4.7□□□□□ -1.66
CDC27-213ENST00000571643 SCAF4O95104 1147 aaKnown RBP4.7□□□□□ -1.66
CDC27-213ENST00000571643 CLEC2LP0C7M8 214 aa4.7□□□□□ -1.66
CDC27-213ENST00000571643 SPATA31D3P0C874 917 aa4.7□□□□□ -1.66
CDC27-213ENST00000571643 LAG3P18627 525 aa4.7□□□□□ -1.66
CDC27-213ENST00000571643 UBE3CQ15386 1083 aa4.7□□□□□ -1.66
CDC27-213ENST00000571643 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.7□□□□□ -1.66
CDC27-213ENST00000571643 CT47A1Q5JQC4 288 aaPredicted RBP4.7□□□□□ -1.66
CDC27-213ENST00000571643 PITRM1Q5JRX3 1037 aa4.7□□□□□ -1.66
CDC27-213ENST00000571643 SPATA31D4Q6ZUB0 917 aa4.7□□□□□ -1.66
CDC27-213ENST00000571643 RHOUQ7L0Q8 258 aa4.7□□□□□ -1.66
CDC27-213ENST00000571643 MRGPREQ86SM8 312 aa4.7□□□□□ -1.66
CDC27-213ENST00000571643 PLXDC1Q8IUK5 500 aa4.7□□□□□ -1.66
CDC27-213ENST00000571643 NDC1Q9BTX1 674 aa4.7□□□□□ -1.66
CDC27-213ENST00000571643 KCNH6Q9H252 994 aa4.7□□□□□ -1.66
CDC27-213ENST00000571643 IKZF4Q9H2S9 585 aa4.7□□□□□ -1.66
CDC27-213ENST00000571643 MS4A5Q9H3V2 200 aa4.7□□□□□ -1.66
CDC27-213ENST00000571643 C11orf21Q9P2W6 132 aa4.7□□□□□ -1.66
CDC27-213ENST00000571643 ARHGAP31Q2M1Z3 1444 aa4.7□□□□□ -1.66
CDC27-213ENST00000571643 C3P01024 1663 aa4.7□□□□□ -1.66
CDC27-213ENST00000571643 PREX1Q8TCU6 1659 aa4.7□□□□□ -1.66
CDC27-213ENST00000571643 WASHC2CQ9Y4E1 1318 aa4.7□□□□□ -1.66
CDC27-213ENST00000571643 DEPDC5O75140 1603 aa4.69□□□□□ -1.66
CDC27-213ENST00000571643 PRDM15P57071 1507 aaPredicted RBP4.69□□□□□ -1.66
CDC27-213ENST00000571643 LMTK2Q8IWU2 1503 aa4.69□□□□□ -1.66
CDC27-213ENST00000571643 LCHNA4D1U4 455 aa4.69□□□□□ -1.66
CDC27-213ENST00000571643 TMEM127O75204 238 aa4.69□□□□□ -1.66
CDC27-213ENST00000571643 ITGA10O75578 1167 aa4.69□□□□□ -1.66
CDC27-213ENST00000571643 LGALS4P56470 323 aa4.69□□□□□ -1.66
CDC27-213ENST00000571643 MRPS9P82933 396 aaKnown RBP4.69□□□□□ -1.66
CDC27-213ENST00000571643 MXRA7P84157 204 aa4.69□□□□□ -1.66
CDC27-213ENST00000571643 TRIM25Q14258 630 aaKnown RBP4.69□□□□□ -1.66
CDC27-213ENST00000571643 FAM50AQ14320 339 aaKnown RBP4.69□□□□□ -1.66
CDC27-213ENST00000571643 TIGD2Q4W5G0 525 aa4.69□□□□□ -1.66
CDC27-213ENST00000571643 GGT6Q6P531 493 aa4.69□□□□□ -1.66
CDC27-213ENST00000571643 LYSMD2Q8IV50 215 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms