RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 PPP1R14BQ96C90 147 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 CRISPLD2Q9H0B8 497 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 EMILIN3Q9NT22 766 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 OBP2AQ9NY56 170 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 LAMA3Q16787 3333 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 FLT1P17948 1338 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 CYP2C8P10632 490 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 MARCKSP29966 332 aaPredicted RBP7.13□□□□□ -1.27
SMG1-217ENST00000569764 PFKPQ01813 784 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 GFOD2Q3B7J2 385 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 ARHGAP29Q52LW3 1261 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.13□□□□□ -1.27
SMG1-217ENST00000569764 RAPH1Q70E73 1250 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 LPCAT2Q7L5N7 544 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.13□□□□□ -1.27
SMG1-217ENST00000569764 NSUN7Q8NE18 718 aaKnown RBP7.13□□□□□ -1.27
SMG1-217ENST00000569764 CHAC2Q8WUX2 184 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 SGCDQ92629 289 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 THEGQ9P2T0 379 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 LRRC10BA6NIK2 292 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 M0QX08 132 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 KDM1AO60341 852 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 CAPN3P20807 821 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 SDHBP21912 280 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 DNAJB1P25685 340 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 CD86P42081 329 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 DYNLL1P63167 89 aaKnown RBP7.13□□□□□ -1.27
SMG1-217ENST00000569764 C16orf86Q6ZW13 317 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 HAUS6Q7Z4H7 955 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 SDCCAG8Q86SQ7 713 aaPredicted RBP7.13□□□□□ -1.27
SMG1-217ENST00000569764 KCNG4Q8TDN1 519 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 SDR42E1Q8WUS8 393 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 NACC1Q96RE7 527 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 FNBP1Q96RU3 617 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 SMARCAD1Q9H4L7 1026 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 TCP11L1Q9NUJ3 509 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.13□□□□□ -1.27
SMG1-217ENST00000569764 MRPS17Q9Y2R5 130 aaKnown RBP7.13□□□□□ -1.27
SMG1-217ENST00000569764 ZNF711Q9Y462 761 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 VPS37CA5D8V6 355 aaPredicted RBP7.13□□□□□ -1.27
SMG1-217ENST00000569764 SIN3BO75182 1162 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 ERLIN2O94905 339 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 EEF2P13639 858 aaKnown RBP7.13□□□□□ -1.27
SMG1-217ENST00000569764 ADD1P35611 737 aaKnown RBP7.13□□□□□ -1.27
SMG1-217ENST00000569764 NPTX2P47972 431 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 SLC26A2P50443 739 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 ADCY7P51828 1080 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 LIMK1P53667 647 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 USP4Q13107 963 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 ACVR2BQ13705 512 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 PPP2R2DQ66LE6 453 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 APOBEC3HQ6NTF7 200 aaKnown RBP7.13□□□□□ -1.27
SMG1-217ENST00000569764 GPR153Q6NV75 609 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 MOB2Q70IA6 237 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 SLFN12Q8IYM2 578 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 ZNF654Q8IZM8 581 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 FIBCD1Q8N539 461 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 ENGASEQ8NFI3 743 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 HERVK_113Q902F9 699 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 ZSCAN31Q96LW9 406 aaPredicted RBP7.13□□□□□ -1.27
SMG1-217ENST00000569764 AIFM3Q96NN9 605 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 HIPK3Q9H422 1215 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 CDK5RAP2Q96SN8 1893 aa7.13□□□□□ -1.27
SMG1-217ENST00000569764 RIPK2O43353 540 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 TLL1O43897 1013 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 CPP00450 1065 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 ADCYAP1R1P41586 468 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 DPYDQ12882 1025 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 GIT2Q14161 759 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 FSCN1Q16658 493 aaKnown RBP7.12□□□□□ -1.27
SMG1-217ENST00000569764 C17orf99Q6UX52 265 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 YAF2Q8IY57 180 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 RNF168Q8IYW5 571 aaPredicted RBP7.12□□□□□ -1.27
SMG1-217ENST00000569764 CCDC116Q8IYX3 515 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 RGL4Q8IZJ4 473 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 RMDN3Q96TC7 470 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 HINFPQ9BQA5 517 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 MYL10Q9BUA6 226 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 CRB3Q9BUF7 120 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 WDR11Q9BZH6 1224 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 CCDC113Q9H0I3 377 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 PCDHB3Q9Y5E6 796 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 SPO11Q9Y5K1 396 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 SYNGAP1Q96PV0 1343 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 BAZ2BQ9UIF8 2168 aaKnown RBP7.12□□□□□ -1.27
SMG1-217ENST00000569764 SYCE3A1L190 88 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 TRAPPC3O43617 180 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 ERLIN1O75477 346 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 DDAH1O94760 285 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 BTF3P20290 206 aaKnown RBP7.12□□□□□ -1.27
SMG1-217ENST00000569764 HIRAP54198 1017 aaPredicted RBP7.12□□□□□ -1.27
SMG1-217ENST00000569764 CD83Q01151 205 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 SETMARQ53H47 684 aaPredicted RBP7.12□□□□□ -1.27
SMG1-217ENST00000569764 PPFIBP1Q86W92 1011 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 GATAD2AQ86YP4 633 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 CELF2-AS1Q8N7Q2 184 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 DNAJC5GQ8N7S2 189 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 RFWD2Q8NHY2 731 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 CEP95Q96GE4 821 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 TMEM169Q96HH4 297 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms