RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 ARHGAP28Q9P2N2 729 aa15.25■□□□□ 0.03
GTF3C1-211ENST00000569653 CLUHO75153 1309 aa15.24■□□□□ 0.03
GTF3C1-211ENST00000569653 SF3B1O75533 1304 aaKnown RBP eCLIP15.24■□□□□ 0.034e-6■■■■■ 69.4
GTF3C1-211ENST00000569653 TADA2AO75478 443 aa15.24■□□□□ 0.03
GTF3C1-211ENST00000569653 THP07101 528 aa15.24■□□□□ 0.03
GTF3C1-211ENST00000569653 PRPHP41219 470 aa15.24■□□□□ 0.03
GTF3C1-211ENST00000569653 PEX3P56589 373 aa15.24■□□□□ 0.03
GTF3C1-211ENST00000569653 ATP2C1P98194 919 aaPredicted RBP15.24■□□□□ 0.03
GTF3C1-211ENST00000569653 PPP2R5AQ15172 486 aa15.24■□□□□ 0.03
GTF3C1-211ENST00000569653 RABEP1Q15276 862 aa15.24■□□□□ 0.03
GTF3C1-211ENST00000569653 FAM171A1Q5VUB5 890 aa15.24■□□□□ 0.03
GTF3C1-211ENST00000569653 GPR65Q8IYL9 337 aa15.24■□□□□ 0.03
GTF3C1-211ENST00000569653 SMG7Q92540 1137 aaKnown RBP15.24■□□□□ 0.03
GTF3C1-211ENST00000569653 KIFAP3Q92845 792 aa15.24■□□□□ 0.03
GTF3C1-211ENST00000569653 ZMAT2Q96NC0 199 aaKnown RBP15.24■□□□□ 0.03
GTF3C1-211ENST00000569653 ACO2Q99798 780 aaKnown RBP15.24■□□□□ 0.03
GTF3C1-211ENST00000569653 NT5C3AQ9H0P0 336 aa15.24■□□□□ 0.03
GTF3C1-211ENST00000569653 KCNK12Q9HB15 430 aa15.24■□□□□ 0.03
GTF3C1-211ENST00000569653 FBXW11Q9UKB1 542 aa15.24■□□□□ 0.03
GTF3C1-211ENST00000569653 SSX2IPQ9Y2D8 614 aa15.24■□□□□ 0.03
GTF3C1-211ENST00000569653 PHLPP2Q6ZVD8 1323 aa15.23■□□□□ 0.03
GTF3C1-211ENST00000569653 SPDYE4A6NLX3 237 aa15.23■□□□□ 0.03
GTF3C1-211ENST00000569653 SFI1A8K8P3 1242 aa15.23■□□□□ 0.03
GTF3C1-211ENST00000569653 I3L4J1 428 aa15.23■□□□□ 0.03
GTF3C1-211ENST00000569653 NR1I2O75469 434 aa15.23■□□□□ 0.03
GTF3C1-211ENST00000569653 NPR3P17342 541 aa15.23■□□□□ 0.03
GTF3C1-211ENST00000569653 PROZP22891 400 aa15.23■□□□□ 0.03
GTF3C1-211ENST00000569653 CLCNKBP51801 687 aa15.23■□□□□ 0.03
GTF3C1-211ENST00000569653 EFNA5P52803 228 aa15.23■□□□□ 0.03
GTF3C1-211ENST00000569653 NTHL1P78549 312 aa15.23■□□□□ 0.03
GTF3C1-211ENST00000569653 TMEM132AQ24JP5 1023 aa15.23■□□□□ 0.03
GTF3C1-211ENST00000569653 DCAF4L1Q3SXM0 396 aa15.23■□□□□ 0.03
GTF3C1-211ENST00000569653 XKR4Q5GH76 650 aa15.23■□□□□ 0.03
GTF3C1-211ENST00000569653 OTOP3Q7RTS5 596 aa15.23■□□□□ 0.03
GTF3C1-211ENST00000569653 PLCD3Q8N3E9 789 aa15.23■□□□□ 0.03
GTF3C1-211ENST00000569653 PIK3R5Q8WYR1 880 aa15.23■□□□□ 0.03
GTF3C1-211ENST00000569653 IFT74Q96LB3 600 aa15.23■□□□□ 0.03
GTF3C1-211ENST00000569653 PLIN2Q99541 437 aa15.23■□□□□ 0.03
GTF3C1-211ENST00000569653 TARS2Q9BW92 718 aaKnown RBP15.23■□□□□ 0.03
GTF3C1-211ENST00000569653 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.23■□□□□ 0.03
GTF3C1-211ENST00000569653 TNFSF13BQ9Y275 285 aa15.23■□□□□ 0.03
GTF3C1-211ENST00000569653 ANK1P16157 1881 aa15.23■□□□□ 0.03
GTF3C1-211ENST00000569653 CCDC169A6NNP5 214 aa15.22■□□□□ 0.03
GTF3C1-211ENST00000569653 PI15O43692 258 aa15.22■□□□□ 0.03
GTF3C1-211ENST00000569653 ST18O60284 1047 aa15.22■□□□□ 0.03
GTF3C1-211ENST00000569653 ZMYND10O75800 440 aa15.22■□□□□ 0.03
GTF3C1-211ENST00000569653 FGFR3P22607 806 aa15.22■□□□□ 0.03
GTF3C1-211ENST00000569653 GJB2P29033 226 aa15.22■□□□□ 0.03
GTF3C1-211ENST00000569653 PTPN5P54829 565 aa15.22■□□□□ 0.03
GTF3C1-211ENST00000569653 RAD51AP2Q09MP3 1159 aa15.22■□□□□ 0.03
GTF3C1-211ENST00000569653 TDGQ13569 410 aa15.22■□□□□ 0.03
GTF3C1-211ENST00000569653 PSMD5Q16401 504 aa15.22■□□□□ 0.03
GTF3C1-211ENST00000569653 HYIQ5T013 277 aa15.22■□□□□ 0.03
GTF3C1-211ENST00000569653 ALKAL1Q6UXT8 129 aa15.22■□□□□ 0.03
GTF3C1-211ENST00000569653 HDAC7Q8WUI4 952 aa15.22■□□□□ 0.03
GTF3C1-211ENST00000569653 ACSF2Q96CM8 615 aaPredicted RBP15.22■□□□□ 0.03
GTF3C1-211ENST00000569653 ZBTB45Q96K62 511 aaPredicted RBP15.22■□□□□ 0.03
GTF3C1-211ENST00000569653 ADPGKQ9BRR6 497 aa15.22■□□□□ 0.03
GTF3C1-211ENST00000569653 TTPALQ9BTX7 342 aa15.22■□□□□ 0.03
GTF3C1-211ENST00000569653 PRKD2Q9BZL6 878 aa15.22■□□□□ 0.03
GTF3C1-211ENST00000569653 PLEKHA4Q9H4M7 779 aa15.22■□□□□ 0.03
GTF3C1-211ENST00000569653 EPS15L1Q9UBC2 864 aa15.22■□□□□ 0.03
GTF3C1-211ENST00000569653 DUSP12Q9UNI6 340 aa15.22■□□□□ 0.03
GTF3C1-211ENST00000569653 RIF1Q5UIP0 2472 aaKnown RBP15.21■□□□□ 0.03
GTF3C1-211ENST00000569653 NPHP3-ACAD11A0A0J9YXS1 232 aa15.21■□□□□ 0.03
GTF3C1-211ENST00000569653 SMIM28A0A1B0GU29 152 aa15.21■□□□□ 0.03
GTF3C1-211ENST00000569653 TMEM189-UBE2V1I3L0A0 370 aa15.21■□□□□ 0.03
GTF3C1-211ENST00000569653 K7ERI5 159 aa15.21■□□□□ 0.03
GTF3C1-211ENST00000569653 LAD1O00515 517 aa15.21■□□□□ 0.03
GTF3C1-211ENST00000569653 SLC16A4O15374 487 aa15.21■□□□□ 0.03
GTF3C1-211ENST00000569653 C1RP00736 705 aa15.21■□□□□ 0.03
GTF3C1-211ENST00000569653 TKTP29401 623 aaKnown RBP15.21■□□□□ 0.03
GTF3C1-211ENST00000569653 GRM5P41594 1212 aa15.21■□□□□ 0.03
GTF3C1-211ENST00000569653 BRCC3P46736 316 aa15.21■□□□□ 0.03
GTF3C1-211ENST00000569653 OSTNP61366 133 aa15.21■□□□□ 0.03
GTF3C1-211ENST00000569653 GRIN1Q05586 938 aa15.21■□□□□ 0.03
GTF3C1-211ENST00000569653 UPP1Q16831 310 aa15.21■□□□□ 0.03
GTF3C1-211ENST00000569653 TMEM119Q4V9L6 283 aa15.21■□□□□ 0.03
GTF3C1-211ENST00000569653 KRT79Q5XKE5 535 aa15.21■□□□□ 0.03
GTF3C1-211ENST00000569653 MCTP1Q6DN14 999 aa15.21■□□□□ 0.03
GTF3C1-211ENST00000569653 POTEHQ6S545 545 aa15.21■□□□□ 0.03
GTF3C1-211ENST00000569653 DTHD1Q6ZMT9 781 aa15.21■□□□□ 0.03
GTF3C1-211ENST00000569653 CEP57Q86XR8 500 aa15.21■□□□□ 0.03
GTF3C1-211ENST00000569653 DDX27Q96GQ7 796 aaKnown RBP15.21■□□□□ 0.03
GTF3C1-211ENST00000569653 HAPLN2Q9GZV7 340 aa15.21■□□□□ 0.03
GTF3C1-211ENST00000569653 TMEM134Q9H6X4 195 aa15.21■□□□□ 0.03
GTF3C1-211ENST00000569653 ZDHHC7Q9NXF8 308 aa15.21■□□□□ 0.03
GTF3C1-211ENST00000569653 DNM3Q9UQ16 869 aa15.21■□□□□ 0.03
GTF3C1-211ENST00000569653 VWA3AA6NCI4 1184 aa15.2■□□□□ 0.02
GTF3C1-211ENST00000569653 H0Y858 1186 aa15.2■□□□□ 0.02
GTF3C1-211ENST00000569653 GALR2O43603 387 aaPredicted RBP15.2■□□□□ 0.02
GTF3C1-211ENST00000569653 GBP2P32456 591 aaPredicted RBP15.2■□□□□ 0.02
GTF3C1-211ENST00000569653 SLC12A3P55017 1021 aa15.2■□□□□ 0.02
GTF3C1-211ENST00000569653 CACNB1Q02641 598 aaPredicted RBP15.2■□□□□ 0.02
GTF3C1-211ENST00000569653 ZRSR1Q15695 479 aaKnown RBP15.2■□□□□ 0.02
GTF3C1-211ENST00000569653 ZNF568Q3ZCX4 644 aa15.2■□□□□ 0.02
GTF3C1-211ENST00000569653 SEZ6Q53EL9 994 aa15.2■□□□□ 0.02
GTF3C1-211ENST00000569653 ARSHQ5FYA8 562 aa15.2■□□□□ 0.02
GTF3C1-211ENST00000569653 CYP26C1Q6V0L0 522 aa15.2■□□□□ 0.02
GTF3C1-211ENST00000569653 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms