RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 PCDHB12Q9Y5F1 795 aa14.21□□□□□ -0.13
CNOT1-217ENST00000569263 CARNS1A5YM72 827 aa14.2□□□□□ -0.14
CNOT1-217ENST00000569263 PTGESO14684 152 aa14.2□□□□□ -0.14
CNOT1-217ENST00000569263 EXOC3O60645 756 aa14.2□□□□□ -0.14
CNOT1-217ENST00000569263 NR3C1P04150 777 aa14.2□□□□□ -0.14
CNOT1-217ENST00000569263 ERVK-21P61565 698 aa14.2□□□□□ -0.14
CNOT1-217ENST00000569263 SLC10A6Q3KNW5 377 aa14.2□□□□□ -0.14
CNOT1-217ENST00000569263 CAVIN1Q6NZI2 390 aaKnown RBP14.2□□□□□ -0.14
CNOT1-217ENST00000569263 LRRC55Q6ZSA7 311 aa14.2□□□□□ -0.14
CNOT1-217ENST00000569263 SPRED2Q7Z698 418 aa14.2□□□□□ -0.14
CNOT1-217ENST00000569263 BRSK2Q8IWQ3 736 aa14.2□□□□□ -0.14
CNOT1-217ENST00000569263 C12orf56Q8IXR9 622 aa14.2□□□□□ -0.14
CNOT1-217ENST00000569263 ADSSL1Q8N142 457 aa14.2□□□□□ -0.14
CNOT1-217ENST00000569263 COLGALT1Q8NBJ5 622 aa14.2□□□□□ -0.14
CNOT1-217ENST00000569263 ARNTL2Q8WYA1 636 aa14.2□□□□□ -0.14
CNOT1-217ENST00000569263 CLP1Q92989 425 aaKnown RBP14.2□□□□□ -0.14
CNOT1-217ENST00000569263 ZNF558Q96NG5 402 aa14.2□□□□□ -0.14
CNOT1-217ENST00000569263 CWH43Q9H720 699 aa14.2□□□□□ -0.14
CNOT1-217ENST00000569263 NRDE2Q9H7Z3 1164 aa14.2□□□□□ -0.14
CNOT1-217ENST00000569263 PLEKHA5Q9HAU0 1116 aa14.2□□□□□ -0.14
CNOT1-217ENST00000569263 MIOSQ9NXC5 875 aa14.2□□□□□ -0.14
CNOT1-217ENST00000569263 RBAKQ9NYW8 714 aaPredicted RBP14.2□□□□□ -0.14
CNOT1-217ENST00000569263 CNTN3Q9P232 1028 aa14.2□□□□□ -0.14
CNOT1-217ENST00000569263 CTNND2Q9UQB3 1225 aa14.2□□□□□ -0.14
CNOT1-217ENST00000569263 TRAF3IP3Q9Y228 551 aa14.2□□□□□ -0.14
CNOT1-217ENST00000569263 PLXNA4Q9HCM2 1894 aa14.19□□□□□ -0.14
CNOT1-217ENST00000569263 SMIM28A0A1B0GU29 152 aa14.19□□□□□ -0.14
CNOT1-217ENST00000569263 TTC26A0AVF1 554 aa14.19□□□□□ -0.14
CNOT1-217ENST00000569263 ZNF233A6NK53 670 aa14.19□□□□□ -0.14
CNOT1-217ENST00000569263 LACTBL1A8MY62 500 aa14.19□□□□□ -0.14
CNOT1-217ENST00000569263 XPOTO43592 962 aaKnown RBP14.19□□□□□ -0.14
CNOT1-217ENST00000569263 DDHD2O94830 711 aa14.19□□□□□ -0.14
CNOT1-217ENST00000569263 IL18RAPO95256 599 aa14.19□□□□□ -0.14
CNOT1-217ENST00000569263 KCNE1P15382 129 aa14.19□□□□□ -0.14
CNOT1-217ENST00000569263 NR2F2P24468 414 aa14.19□□□□□ -0.14
CNOT1-217ENST00000569263 RPL13P26373 211 aaKnown RBP14.19□□□□□ -0.14
CNOT1-217ENST00000569263 ALDH7A1P49419 539 aaKnown RBP14.19□□□□□ -0.14
CNOT1-217ENST00000569263 FXR1P51114 621 aaKnown RBP eCLIP14.19□□□□□ -0.14
CNOT1-217ENST00000569263 POU5F1Q01860 360 aaKnown RBP14.19□□□□□ -0.14
CNOT1-217ENST00000569263 TUSC3Q13454 348 aa14.19□□□□□ -0.14
CNOT1-217ENST00000569263 SNRNP35Q16560 246 aaKnown RBP14.19□□□□□ -0.14
CNOT1-217ENST00000569263 KLHL40Q2TBA0 621 aa14.19□□□□□ -0.14
CNOT1-217ENST00000569263 EPC2Q52LR7 807 aa14.19□□□□□ -0.14
CNOT1-217ENST00000569263 XKR4Q5GH76 650 aa14.19□□□□□ -0.14
CNOT1-217ENST00000569263 KCNT2Q6UVM3 1135 aa14.19□□□□□ -0.14
CNOT1-217ENST00000569263 CRELD2Q6UXH1 353 aaPredicted RBP14.19□□□□□ -0.14
CNOT1-217ENST00000569263 ZNF280BQ86YH2 543 aa14.19□□□□□ -0.14
CNOT1-217ENST00000569263 CD302Q8IX05 232 aa14.19□□□□□ -0.14
CNOT1-217ENST00000569263 GSTCDQ8NEC7 633 aa14.19□□□□□ -0.14
CNOT1-217ENST00000569263 ZSWIM2Q8NEG5 633 aa14.19□□□□□ -0.14
CNOT1-217ENST00000569263 FBXO22Q8NEZ5 403 aa14.19□□□□□ -0.14
CNOT1-217ENST00000569263 P2RX5Q93086 422 aa14.19□□□□□ -0.14
CNOT1-217ENST00000569263 DHTKD1Q96HY7 919 aaPredicted RBP14.19□□□□□ -0.14
CNOT1-217ENST00000569263 TMEM175Q9BSA9 504 aa14.19□□□□□ -0.14
CNOT1-217ENST00000569263 CXCL16Q9H2A7 254 aa14.19□□□□□ -0.14
CNOT1-217ENST00000569263 SEMA6BQ9H3T3 888 aa14.19□□□□□ -0.14
CNOT1-217ENST00000569263 SLC38A7Q9NVC3 462 aa14.19□□□□□ -0.14
CNOT1-217ENST00000569263 DNAJB4Q9UDY4 337 aa14.19□□□□□ -0.14
CNOT1-217ENST00000569263 PLAGL2Q9UPG8 496 aa14.19□□□□□ -0.14
CNOT1-217ENST00000569263 LAMA2P24043 3122 aaKnown RBP14.18□□□□□ -0.14
CNOT1-217ENST00000569263 BICDL2A1A5D9 508 aa14.18□□□□□ -0.14
CNOT1-217ENST00000569263 CD44P16070 742 aaKnown RBP14.18□□□□□ -0.14
CNOT1-217ENST00000569263 BMP6P22004 513 aa14.18□□□□□ -0.14
CNOT1-217ENST00000569263 CCNE1P24864 410 aa14.18□□□□□ -0.14
CNOT1-217ENST00000569263 PPM1AP35813 382 aa14.18□□□□□ -0.14
CNOT1-217ENST00000569263 BMPR1AP36894 532 aa14.18□□□□□ -0.14
CNOT1-217ENST00000569263 PBX3P40426 434 aa14.18□□□□□ -0.14
CNOT1-217ENST00000569263 OR1G1P47890 313 aa14.18□□□□□ -0.14
CNOT1-217ENST00000569263 BCAR1P56945 870 aa14.18□□□□□ -0.14
CNOT1-217ENST00000569263 NLRP12P59046 1061 aa14.18□□□□□ -0.14
CNOT1-217ENST00000569263 LRRC63Q05C16 580 aa14.18□□□□□ -0.14
CNOT1-217ENST00000569263 SPAG1Q07617 926 aa14.18□□□□□ -0.14
CNOT1-217ENST00000569263 PAK1Q13153 545 aa14.18□□□□□ -0.14
CNOT1-217ENST00000569263 TMEM132DQ14C87 1099 aa14.18□□□□□ -0.14
CNOT1-217ENST00000569263 SURF1Q15526 300 aa14.18□□□□□ -0.14
CNOT1-217ENST00000569263 SKOR2Q2VWA4 1001 aaPredicted RBP14.18□□□□□ -0.14
CNOT1-217ENST00000569263 EDRF1Q3B7T1 1238 aa14.18□□□□□ -0.14
CNOT1-217ENST00000569263 ZCWPW2Q504Y3 356 aa14.18□□□□□ -0.14
CNOT1-217ENST00000569263 CEP135Q66GS9 1140 aa14.18□□□□□ -0.14
CNOT1-217ENST00000569263 CENPPQ6IPU0 288 aa14.18□□□□□ -0.14
CNOT1-217ENST00000569263 GPR153Q6NV75 609 aa14.18□□□□□ -0.14
CNOT1-217ENST00000569263 ALKAL1Q6UXT8 129 aa14.18□□□□□ -0.14
CNOT1-217ENST00000569263 RBM43Q6ZSC3 357 aaKnown RBP14.18□□□□□ -0.14
CNOT1-217ENST00000569263 CBWD2Q8IUF1 395 aa14.18□□□□□ -0.14
CNOT1-217ENST00000569263 SLC9A9Q8IVB4 645 aa14.18□□□□□ -0.14
CNOT1-217ENST00000569263 RDH13Q8NBN7 331 aa14.18□□□□□ -0.14
CNOT1-217ENST00000569263 NELFBQ8WX92 580 aa14.18□□□□□ -0.14
CNOT1-217ENST00000569263 KIF12Q96FN5 646 aa14.18□□□□□ -0.14
CNOT1-217ENST00000569263 FAM161BQ96MY7 647 aa14.18□□□□□ -0.14
CNOT1-217ENST00000569263 PPP1R10Q96QC0 940 aaKnown RBP14.18□□□□□ -0.14
CNOT1-217ENST00000569263 C11orf84Q9BUA3 381 aaPredicted RBP14.18□□□□□ -0.14
CNOT1-217ENST00000569263 PLVAPQ9BX97 442 aa14.18□□□□□ -0.14
CNOT1-217ENST00000569263 TTYH1Q9H313 450 aaPredicted RBP14.18□□□□□ -0.14
CNOT1-217ENST00000569263 ASB7Q9H672 318 aa14.18□□□□□ -0.14
CNOT1-217ENST00000569263 TMEM63CQ9P1W3 806 aa14.18□□□□□ -0.14
CNOT1-217ENST00000569263 DACH1Q9UI36 760 aa14.18□□□□□ -0.14
CNOT1-217ENST00000569263 FRMD4BQ9Y2L6 1034 aa14.18□□□□□ -0.14
CNOT1-217ENST00000569263 PRG3Q9Y2Y8 225 aaPredicted RBP14.18□□□□□ -0.14
CNOT1-217ENST00000569263 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.18□□□□□ -0.14
CNOT1-217ENST00000569263 TRIM49BA6NDI0 452 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms