RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 RPF1Q9H9Y2 349 aaKnown RBP17.46■□□□□ 0.39
USB1-215ENST00000569252 TOPORSQ9NS56 1045 aaPredicted RBP17.46■□□□□ 0.39
USB1-215ENST00000569252 SNTG2Q9NY99 539 aa17.46■□□□□ 0.39
USB1-215ENST00000569252 CTNND2Q9UQB3 1225 aa17.46■□□□□ 0.39
USB1-215ENST00000569252 TRAF3IP3Q9Y228 551 aa17.46■□□□□ 0.39
USB1-215ENST00000569252 STYXL1Q9Y6J8 313 aa17.46■□□□□ 0.39
USB1-215ENST00000569252 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.45■□□□□ 0.38
USB1-215ENST00000569252 EXTL3O43909 919 aa17.45■□□□□ 0.38
USB1-215ENST00000569252 NR3C1P04150 777 aa17.45■□□□□ 0.38
USB1-215ENST00000569252 CLTAP09496 248 aa17.45■□□□□ 0.38
USB1-215ENST00000569252 ERCC5P28715 1186 aaPredicted RBP17.45■□□□□ 0.38
USB1-215ENST00000569252 FKBP3Q00688 224 aaKnown RBP17.45■□□□□ 0.38
USB1-215ENST00000569252 ADAM9Q13443 819 aa17.45■□□□□ 0.38
USB1-215ENST00000569252 AAK1Q2M2I8 961 aa17.45■□□□□ 0.38
USB1-215ENST00000569252 EDRF1Q3B7T1 1238 aa17.45■□□□□ 0.38
USB1-215ENST00000569252 UBXN11Q5T124 520 aa17.45■□□□□ 0.38
USB1-215ENST00000569252 MRPL10Q7Z7H8 261 aaKnown RBP17.45■□□□□ 0.38
USB1-215ENST00000569252 GPD1LQ8N335 351 aa17.45■□□□□ 0.38
USB1-215ENST00000569252 XXYLT1Q8NBI6 393 aa17.45■□□□□ 0.38
USB1-215ENST00000569252 TOP1MTQ969P6 601 aa17.45■□□□□ 0.38
USB1-215ENST00000569252 FAM213AQ9BRX8 229 aa17.45■□□□□ 0.38
USB1-215ENST00000569252 HSPBP1Q9NZL4 362 aa17.45■□□□□ 0.38
USB1-215ENST00000569252 RWDD2AQ9UIY3 292 aa17.45■□□□□ 0.38
USB1-215ENST00000569252 GIT1Q9Y2X7 761 aa17.45■□□□□ 0.38
USB1-215ENST00000569252 ZNF233A6NK53 670 aa17.44■□□□□ 0.38
USB1-215ENST00000569252 CD44P16070 742 aaKnown RBP17.44■□□□□ 0.38
USB1-215ENST00000569252 NR2F2P24468 414 aa17.44■□□□□ 0.38
USB1-215ENST00000569252 ADSSP30520 456 aa17.44■□□□□ 0.38
USB1-215ENST00000569252 GRM5P41594 1212 aa17.44■□□□□ 0.38
USB1-215ENST00000569252 DPCR1Q3MIW9 517 aa17.44■□□□□ 0.38
USB1-215ENST00000569252 CEP135Q66GS9 1140 aa17.44■□□□□ 0.38
USB1-215ENST00000569252 ANKRD40Q6AI12 368 aa17.44■□□□□ 0.38
USB1-215ENST00000569252 SLC39A4Q6P5W5 647 aa17.44■□□□□ 0.38
USB1-215ENST00000569252 GLB1LQ6UWU2 654 aa17.44■□□□□ 0.38
USB1-215ENST00000569252 USP37Q86T82 979 aa17.44■□□□□ 0.38
USB1-215ENST00000569252 C12orf56Q8IXR9 622 aa17.44■□□□□ 0.38
USB1-215ENST00000569252 RDH13Q8NBN7 331 aa17.44■□□□□ 0.38
USB1-215ENST00000569252 URGCPQ8TCY9 931 aa17.44■□□□□ 0.38
USB1-215ENST00000569252 LINC01599Q8WXQ3 324 aa17.44■□□□□ 0.38
USB1-215ENST00000569252 RSPH1Q8WYR4 309 aa17.44■□□□□ 0.38
USB1-215ENST00000569252 FAM212AQ96EL1 285 aa17.44■□□□□ 0.38
USB1-215ENST00000569252 RPS6KC1Q96S38 1066 aa17.44■□□□□ 0.38
USB1-215ENST00000569252 CBWD1Q9BRT8 395 aa17.44■□□□□ 0.38
USB1-215ENST00000569252 C17orf80Q9BSJ5 609 aa17.44■□□□□ 0.38
USB1-215ENST00000569252 KANSL3Q9P2N6 904 aa17.44■□□□□ 0.38
USB1-215ENST00000569252 MYO7AQ13402 2215 aa17.43■□□□□ 0.38
USB1-215ENST00000569252 LINC01553A4QN01 128 aa17.43■□□□□ 0.38
USB1-215ENST00000569252 TISP43B9A030 160 aa17.43■□□□□ 0.38
USB1-215ENST00000569252 CAVIN2O95810 425 aa17.43■□□□□ 0.38
USB1-215ENST00000569252 IL9P15248 144 aa17.43■□□□□ 0.38
USB1-215ENST00000569252 AKAP5P24588 427 aa17.43■□□□□ 0.38
USB1-215ENST00000569252 HOXD11P31277 338 aaPredicted RBP17.43■□□□□ 0.38
USB1-215ENST00000569252 ACOT2P49753 483 aa17.43■□□□□ 0.38
USB1-215ENST00000569252 STX17P56962 302 aa17.43■□□□□ 0.38
USB1-215ENST00000569252 POU5F1Q01860 360 aaKnown RBP17.43■□□□□ 0.38
USB1-215ENST00000569252 SURF1Q15526 300 aa17.43■□□□□ 0.38
USB1-215ENST00000569252 NFIL3Q16649 462 aa17.43■□□□□ 0.38
USB1-215ENST00000569252 TMEM31Q5JXX7 168 aa17.43■□□□□ 0.38
USB1-215ENST00000569252 SLC9A9Q8IVB4 645 aa17.43■□□□□ 0.38
USB1-215ENST00000569252 CSGALNACT2Q8N6G5 542 aa17.43■□□□□ 0.38
USB1-215ENST00000569252 SMG8Q8ND04 991 aaKnown RBP17.43■□□□□ 0.38
USB1-215ENST00000569252 SAAL1Q96ER3 474 aa17.43■□□□□ 0.38
USB1-215ENST00000569252 IKZF4Q9H2S9 585 aa17.43■□□□□ 0.38
USB1-215ENST00000569252 NXF3Q9H4D5 531 aaKnown RBP17.43■□□□□ 0.38
USB1-215ENST00000569252 RSAD1Q9HA92 442 aa17.43■□□□□ 0.38
USB1-215ENST00000569252 COG5Q9UP83 839 aa17.43■□□□□ 0.38
USB1-215ENST00000569252 HES2Q9Y543 173 aa17.43■□□□□ 0.38
USB1-215ENST00000569252 SIP14410 1827 aa17.42■□□□□ 0.38
USB1-215ENST00000569252 ZMYM2Q9UBW7 1377 aa17.42■□□□□ 0.38
USB1-215ENST00000569252 GOLGA8IPA6NC78 632 aa17.42■□□□□ 0.38
USB1-215ENST00000569252 GOLGA8JA6NMD2 632 aa17.42■□□□□ 0.38
USB1-215ENST00000569252 EPB41P11171 864 aaKnown RBP17.42■□□□□ 0.38
USB1-215ENST00000569252 KCNA5P22460 613 aa17.42■□□□□ 0.38
USB1-215ENST00000569252 PSMC2P35998 433 aaKnown RBP17.42■□□□□ 0.38
USB1-215ENST00000569252 PPP2R3AQ06190 1150 aa17.42■□□□□ 0.38
USB1-215ENST00000569252 SEZ6Q53EL9 994 aa17.42■□□□□ 0.38
USB1-215ENST00000569252 CREBRFQ8IUR6 639 aa17.42■□□□□ 0.38
USB1-215ENST00000569252 CD302Q8IX05 232 aa17.42■□□□□ 0.38
USB1-215ENST00000569252 TMEM174Q8WUU8 243 aa17.42■□□□□ 0.38
USB1-215ENST00000569252 LPPQ93052 612 aa17.42■□□□□ 0.38
USB1-215ENST00000569252 FAM193BQ96PV7 902 aaPredicted RBP17.42■□□□□ 0.38
USB1-215ENST00000569252 YME1L1Q96TA2 773 aa17.42■□□□□ 0.38
USB1-215ENST00000569252 PLEKHA5Q9HAU0 1116 aa17.42■□□□□ 0.38
USB1-215ENST00000569252 RBAKQ9NYW8 714 aaPredicted RBP17.42■□□□□ 0.38
USB1-215ENST00000569252 SMTNL1A8MU46 457 aa17.41■□□□□ 0.38
USB1-215ENST00000569252 BECN2A8MW95 431 aa17.41■□□□□ 0.38
USB1-215ENST00000569252 ABLIM1O14639 778 aa17.41■□□□□ 0.38
USB1-215ENST00000569252 RECQL4O94761 1208 aa17.41■□□□□ 0.38
USB1-215ENST00000569252 IL18RAPO95256 599 aa17.41■□□□□ 0.38
USB1-215ENST00000569252 GJB5O95377 273 aa17.41■□□□□ 0.38
USB1-215ENST00000569252 GNA14O95837 355 aa17.41■□□□□ 0.38
USB1-215ENST00000569252 KRT13P13646 458 aa17.41■□□□□ 0.38
USB1-215ENST00000569252 RNASELQ05823 741 aaKnown RBP17.41■□□□□ 0.38
USB1-215ENST00000569252 SNRNP35Q16560 246 aaKnown RBP17.41■□□□□ 0.38
USB1-215ENST00000569252 ANO6Q4KMQ2 910 aa17.41■□□□□ 0.38
USB1-215ENST00000569252 FOXR2Q6PJQ5 311 aa17.41■□□□□ 0.38
USB1-215ENST00000569252 CEP63Q96MT8 703 aa17.41■□□□□ 0.38
USB1-215ENST00000569252 FNBP1Q96RU3 617 aa17.41■□□□□ 0.38
USB1-215ENST00000569252 HAPLN2Q9GZV7 340 aa17.41■□□□□ 0.38
USB1-215ENST00000569252 DNAJC25Q9H1X3 360 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms