RNA–Protein interactions for RNA: ENST00000568566.5

TSC2-223, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-223ENST00000568566 VN1R3Q9BXE9 311 aa9.22□□□□□ -0.93
TSC2-223ENST00000568566 SCAND2PQ9GZW5 306 aaPredicted RBP9.22□□□□□ -0.93
TSC2-223ENST00000568566 GBP3Q9H0R5 595 aa9.22□□□□□ -0.93
TSC2-223ENST00000568566 KCNK12Q9HB15 430 aa9.22□□□□□ -0.93
TSC2-223ENST00000568566 DUSP12Q9UNI6 340 aa9.22□□□□□ -0.93
TSC2-223ENST00000568566 INPP5FQ9Y2H2 1132 aa9.22□□□□□ -0.93
TSC2-223ENST00000568566 R4GN57 208 aa9.22□□□□□ -0.93
TSC2-223ENST00000568566 FAM237AA0A1B0GTK4 181 aa9.21□□□□□ -0.94
TSC2-223ENST00000568566 A0A1W2PQ27 194 aa9.21□□□□□ -0.94
TSC2-223ENST00000568566 A0A1W2PQ64 194 aa9.21□□□□□ -0.94
TSC2-223ENST00000568566 A0A1W2PQD8 194 aa9.21□□□□□ -0.94
TSC2-223ENST00000568566 LRRIQ4A6NIV6 560 aa9.21□□□□□ -0.94
TSC2-223ENST00000568566 TISP43B9A030 160 aa9.21□□□□□ -0.94
TSC2-223ENST00000568566 STK25O00506 426 aa9.21□□□□□ -0.94
TSC2-223ENST00000568566 CFHP08603 1231 aa9.21□□□□□ -0.94
TSC2-223ENST00000568566 CTSAP10619 480 aa9.21□□□□□ -0.94
TSC2-223ENST00000568566 TMOD1P28289 359 aa9.21□□□□□ -0.94
TSC2-223ENST00000568566 NPTX2P47972 431 aa9.21□□□□□ -0.94
TSC2-223ENST00000568566 CASP5P51878 434 aa9.21□□□□□ -0.94
TSC2-223ENST00000568566 PTENP60484 403 aa9.21□□□□□ -0.94
TSC2-223ENST00000568566 MBTD1Q05BQ5 628 aa9.21□□□□□ -0.94
TSC2-223ENST00000568566 KCNA1Q09470 495 aa9.21□□□□□ -0.94
TSC2-223ENST00000568566 PTPN14Q15678 1187 aa9.21□□□□□ -0.94
TSC2-223ENST00000568566 ZC2HC1CQ53FD0 456 aaPredicted RBP9.21□□□□□ -0.94
TSC2-223ENST00000568566 UBXN11Q5T124 520 aa9.21□□□□□ -0.94
TSC2-223ENST00000568566 NT5DC1Q5TFE4 455 aa9.21□□□□□ -0.94
TSC2-223ENST00000568566 DGLUCYQ7Z3D6 616 aa9.21□□□□□ -0.94
TSC2-223ENST00000568566 GPR149Q86SP6 731 aa9.21□□□□□ -0.94
TSC2-223ENST00000568566 DDX53Q86TM3 631 aaKnown RBP9.21□□□□□ -0.94
TSC2-223ENST00000568566 SFR1Q86XK3 245 aa9.21□□□□□ -0.94
TSC2-223ENST00000568566 PSPC1Q8WXF1 523 aaKnown RBP9.21□□□□□ -0.94
TSC2-223ENST00000568566 RSAD2Q8WXG1 361 aa9.21□□□□□ -0.94
TSC2-223ENST00000568566 DDX12PQ92771 950 aa9.21□□□□□ -0.94
TSC2-223ENST00000568566 PAGE5Q96GU1 130 aa9.21□□□□□ -0.94
TSC2-223ENST00000568566 IGSF21Q96ID5 467 aa9.21□□□□□ -0.94
TSC2-223ENST00000568566 ZBTB45Q96K62 511 aaPredicted RBP9.21□□□□□ -0.94
TSC2-223ENST00000568566 HINFPQ9BQA5 517 aa9.21□□□□□ -0.94
TSC2-223ENST00000568566 RTP3Q9BQQ7 232 aa9.21□□□□□ -0.94
TSC2-223ENST00000568566 CCDC113Q9H0I3 377 aa9.21□□□□□ -0.94
TSC2-223ENST00000568566 NT5C3AQ9H0P0 336 aa9.21□□□□□ -0.94
TSC2-223ENST00000568566 ZHX3Q9H4I2 956 aa9.21□□□□□ -0.94
TSC2-223ENST00000568566 TBC1D13Q9NVG8 400 aa9.21□□□□□ -0.94
TSC2-223ENST00000568566 DACT1Q9NYF0 836 aa9.21□□□□□ -0.94
TSC2-223ENST00000568566 CCDC39Q9UFE4 941 aa9.21□□□□□ -0.94
TSC2-223ENST00000568566 CCDC169A6NNP5 214 aa9.2□□□□□ -0.94
TSC2-223ENST00000568566 INO80B-WBP1J3KQ70 363 aa9.2□□□□□ -0.94
TSC2-223ENST00000568566 KLRC4O43908 158 aa9.2□□□□□ -0.94
TSC2-223ENST00000568566 B4GALT3O60512 393 aa9.2□□□□□ -0.94
TSC2-223ENST00000568566 TSPAN1O60635 241 aa9.2□□□□□ -0.94
TSC2-223ENST00000568566 N4BP1O75113 896 aaKnown RBP9.2□□□□□ -0.94
TSC2-223ENST00000568566 NR1I2O75469 434 aa9.2□□□□□ -0.94
TSC2-223ENST00000568566 ZNF202O95125 648 aa9.2□□□□□ -0.94
TSC2-223ENST00000568566 LMNAP02545 664 aaKnown RBP9.2□□□□□ -0.94
TSC2-223ENST00000568566 GUCY2CP25092 1073 aa9.2□□□□□ -0.94
TSC2-223ENST00000568566 PHKA2P46019 1235 aa9.2□□□□□ -0.94
TSC2-223ENST00000568566 DNM2P50570 870 aa9.2□□□□□ -0.94
TSC2-223ENST00000568566 AFF1P51825 1210 aaKnown RBP9.2□□□□□ -0.94
TSC2-223ENST00000568566 RNASELQ05823 741 aaKnown RBP9.2□□□□□ -0.94
TSC2-223ENST00000568566 TWF2Q6IBS0 349 aaKnown RBP9.2□□□□□ -0.94
TSC2-223ENST00000568566 GLB1LQ6UWU2 654 aa9.2□□□□□ -0.94
TSC2-223ENST00000568566 KRBA2Q6ZNG9 492 aa9.2□□□□□ -0.94
TSC2-223ENST00000568566 SV2BQ7L1I2 683 aa9.2□□□□□ -0.94
TSC2-223ENST00000568566 PPFIBP1Q86W92 1011 aa9.2□□□□□ -0.94
TSC2-223ENST00000568566 FMR1NBQ8N0W7 255 aaPredicted RBP9.2□□□□□ -0.94
TSC2-223ENST00000568566 ZSWIM2Q8NEG5 633 aa9.2□□□□□ -0.94
TSC2-223ENST00000568566 EIF2AQ9BY44 585 aaKnown RBP9.2□□□□□ -0.94
TSC2-223ENST00000568566 INO80BQ9C086 356 aaPredicted RBP9.2□□□□□ -0.94
TSC2-223ENST00000568566 HAPLN2Q9GZV7 340 aa9.2□□□□□ -0.94
TSC2-223ENST00000568566 RNF39Q9H2S5 420 aa9.2□□□□□ -0.94
TSC2-223ENST00000568566 NRDE2Q9H7Z3 1164 aa9.2□□□□□ -0.94
TSC2-223ENST00000568566 LMBRD1Q9NUN5 540 aa9.2□□□□□ -0.94
TSC2-223ENST00000568566 KBTBD4Q9NVX7 518 aa9.2□□□□□ -0.94
TSC2-223ENST00000568566 DNAJB4Q9UDY4 337 aa9.2□□□□□ -0.94
TSC2-223ENST00000568566 STK17AQ9UEE5 414 aa9.2□□□□□ -0.94
TSC2-223ENST00000568566 CA14Q9ULX7 337 aa9.2□□□□□ -0.94
TSC2-223ENST00000568566 PIN4Q9Y237 131 aaKnown RBP9.2□□□□□ -0.94
TSC2-223ENST00000568566 ATP6V1DQ9Y5K8 247 aa9.2□□□□□ -0.94
TSC2-223ENST00000568566 IRAK3Q9Y616 596 aa9.2□□□□□ -0.94
TSC2-223ENST00000568566 CHD8Q9HCK8 2581 aa9.2□□□□□ -0.94
TSC2-223ENST00000568566 KMT2BQ9UMN6 2715 aaPredicted RBP9.19□□□□□ -0.94
TSC2-223ENST00000568566 KRBA1A5PL33 1030 aa9.19□□□□□ -0.94
TSC2-223ENST00000568566 ANKRD63C9JTQ0 380 aa9.19□□□□□ -0.94
TSC2-223ENST00000568566 MEFVO15553 781 aaPredicted RBP9.19□□□□□ -0.94
TSC2-223ENST00000568566 SLC26A4O43511 780 aa9.19□□□□□ -0.94
TSC2-223ENST00000568566 KRT18P05783 430 aaKnown RBP9.19□□□□□ -0.94
TSC2-223ENST00000568566 GALTP07902 379 aa9.19□□□□□ -0.94
TSC2-223ENST00000568566 CNPP09543 421 aaKnown RBP9.19□□□□□ -0.94
TSC2-223ENST00000568566 MYBP10242 640 aa9.19□□□□□ -0.94
TSC2-223ENST00000568566 PLS3P13797 630 aa9.19□□□□□ -0.94
TSC2-223ENST00000568566 IDEP14735 1019 aa9.19□□□□□ -0.94
TSC2-223ENST00000568566 ARF4P18085 180 aaPredicted RBP9.19□□□□□ -0.94
TSC2-223ENST00000568566 KLRC2P26717 231 aa9.19□□□□□ -0.94
TSC2-223ENST00000568566 GBP2P32456 591 aaPredicted RBP9.19□□□□□ -0.94
TSC2-223ENST00000568566 HOXD13P35453 343 aa9.19□□□□□ -0.94
TSC2-223ENST00000568566 SYKP43405 635 aa9.19□□□□□ -0.94
TSC2-223ENST00000568566 SLC11A1P49279 550 aa9.19□□□□□ -0.94
TSC2-223ENST00000568566 CLCN4P51793 760 aa9.19□□□□□ -0.94
TSC2-223ENST00000568566 SEZ6Q53EL9 994 aa9.19□□□□□ -0.94
TSC2-223ENST00000568566 NOMO2Q5JPE7 1267 aa9.19□□□□□ -0.94
TSC2-223ENST00000568566 CCDC73Q6ZRK6 1079 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms