RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 PRPF40AO75400 957 aaKnown RBP18.78■□□□□ 0.6
COMMD4-220ENST00000567720 RHOBTB3O94955 611 aa18.78■□□□□ 0.6
COMMD4-220ENST00000567720 CSPG5O95196 566 aa18.78■□□□□ 0.6
COMMD4-220ENST00000567720 GALTP07902 379 aa18.78■□□□□ 0.6
COMMD4-220ENST00000567720 POU3F3P20264 500 aaPredicted RBP18.78■□□□□ 0.6
COMMD4-220ENST00000567720 IGFBP4P22692 258 aa18.78■□□□□ 0.6
COMMD4-220ENST00000567720 PPM1AP35813 382 aa18.78■□□□□ 0.6
COMMD4-220ENST00000567720 YARSP54577 528 aaKnown RBP18.78■□□□□ 0.6
COMMD4-220ENST00000567720 CAMK1Q14012 370 aa18.78■□□□□ 0.6
COMMD4-220ENST00000567720 ENOX2Q16206 610 aaKnown RBP18.78■□□□□ 0.6
COMMD4-220ENST00000567720 SLC10A6Q3KNW5 377 aa18.78■□□□□ 0.6
COMMD4-220ENST00000567720 XKR4Q5GH76 650 aa18.78■□□□□ 0.6
COMMD4-220ENST00000567720 ALKAL1Q6UXT8 129 aa18.78■□□□□ 0.6
COMMD4-220ENST00000567720 NELFCDQ8IXH7 590 aa18.78■□□□□ 0.6
COMMD4-220ENST00000567720 SYCP3Q8IZU3 236 aa18.78■□□□□ 0.6
COMMD4-220ENST00000567720 ZSWIM2Q8NEG5 633 aa18.78■□□□□ 0.6
COMMD4-220ENST00000567720 SPPL3Q8TCT6 385 aa18.78■□□□□ 0.6
COMMD4-220ENST00000567720 POMGNT1Q8WZA1 660 aa18.78■□□□□ 0.6
COMMD4-220ENST00000567720 ERCC4Q92889 916 aaPredicted RBP18.78■□□□□ 0.6
COMMD4-220ENST00000567720 CCDC34Q96HJ3 373 aa18.78■□□□□ 0.6
COMMD4-220ENST00000567720 ZMAT2Q96NC0 199 aaKnown RBP18.78■□□□□ 0.6
COMMD4-220ENST00000567720 ACAP3Q96P50 834 aa18.78■□□□□ 0.6
COMMD4-220ENST00000567720 PPP1R10Q96QC0 940 aaKnown RBP18.78■□□□□ 0.6
COMMD4-220ENST00000567720 CBWD1Q9BRT8 395 aa18.78■□□□□ 0.6
COMMD4-220ENST00000567720 TMEM175Q9BSA9 504 aa18.78■□□□□ 0.6
COMMD4-220ENST00000567720 TMEM206Q9H813 350 aa18.78■□□□□ 0.6
COMMD4-220ENST00000567720 STXBP5LQ9Y2K9 1186 aa18.78■□□□□ 0.6
COMMD4-220ENST00000567720 KCNB1Q14721 858 aa18.77■□□□□ 0.6
COMMD4-220ENST00000567720 MRPL38Q96DV4 380 aaKnown RBP18.77■□□□□ 0.6
COMMD4-220ENST00000567720 FAM193BQ96PV7 902 aaPredicted RBP18.77■□□□□ 0.6
COMMD4-220ENST00000567720 PAAF1Q9BRP4 392 aa18.77■□□□□ 0.6
COMMD4-220ENST00000567720 VN1R3Q9BXE9 311 aa18.77■□□□□ 0.6
COMMD4-220ENST00000567720 SPG21Q9NZD8 308 aa18.77■□□□□ 0.6
COMMD4-220ENST00000567720 CPSF3Q9UKF6 684 aaKnown RBP18.77■□□□□ 0.6
COMMD4-220ENST00000567720 AGO2Q9UKV8 859 aaKnown RBP18.77■□□□□ 0.6
COMMD4-220ENST00000567720 PRG3Q9Y2Y8 225 aaPredicted RBP18.77■□□□□ 0.6
COMMD4-220ENST00000567720 UNC80Q8N2C7 3258 aa18.77■□□□□ 0.6
COMMD4-220ENST00000567720 PLXNA3P51805 1871 aa18.76■□□□□ 0.59
COMMD4-220ENST00000567720 SMIM28A0A1B0GU29 152 aa18.76■□□□□ 0.59
COMMD4-220ENST00000567720 TTC26A0AVF1 554 aa18.76■□□□□ 0.59
COMMD4-220ENST00000567720 CASTOR2A6NHX0 329 aa18.76■□□□□ 0.59
COMMD4-220ENST00000567720 NRP1O14786 923 aa18.76■□□□□ 0.59
COMMD4-220ENST00000567720 TGFB1I1O43294 461 aa18.76■□□□□ 0.59
COMMD4-220ENST00000567720 THP07101 528 aa18.76■□□□□ 0.59
COMMD4-220ENST00000567720 CLTAP09496 248 aa18.76■□□□□ 0.59
COMMD4-220ENST00000567720 GARTP22102 1010 aa18.76■□□□□ 0.59
COMMD4-220ENST00000567720 ALDH7A1P49419 539 aaKnown RBP18.76■□□□□ 0.59
COMMD4-220ENST00000567720 ACOT2P49753 483 aa18.76■□□□□ 0.59
COMMD4-220ENST00000567720 PLCB3Q01970 1234 aa18.76■□□□□ 0.59
COMMD4-220ENST00000567720 SOX4Q06945 474 aaPredicted RBP18.76■□□□□ 0.59
COMMD4-220ENST00000567720 PSMD2Q13200 908 aa18.76■□□□□ 0.59
COMMD4-220ENST00000567720 TUSC3Q13454 348 aa18.76■□□□□ 0.59
COMMD4-220ENST00000567720 SLFN12LQ6IEE8 588 aa18.76■□□□□ 0.59
COMMD4-220ENST00000567720 CRELD2Q6UXH1 353 aaPredicted RBP18.76■□□□□ 0.59
COMMD4-220ENST00000567720 POF1BQ8WVV4 589 aa18.76■□□□□ 0.59
COMMD4-220ENST00000567720 SAAL1Q96ER3 474 aa18.76■□□□□ 0.59
COMMD4-220ENST00000567720 IGSF21Q96ID5 467 aa18.76■□□□□ 0.59
COMMD4-220ENST00000567720 GBP4Q96PP9 640 aa18.76■□□□□ 0.59
COMMD4-220ENST00000567720 LMAN2LQ9H0V9 348 aa18.76■□□□□ 0.59
COMMD4-220ENST00000567720 GOLGA2P5Q9HBQ8 144 aa18.76■□□□□ 0.59
COMMD4-220ENST00000567720 SCN1AP35498 2009 aa18.76■□□□□ 0.59
COMMD4-220ENST00000567720 KCNE1P15382 129 aa18.75■□□□□ 0.59
COMMD4-220ENST00000567720 IRS1P35568 1242 aa18.75■□□□□ 0.59
COMMD4-220ENST00000567720 OR1G1P47890 313 aa18.75■□□□□ 0.59
COMMD4-220ENST00000567720 UBE3AQ05086 875 aa18.75■□□□□ 0.59
COMMD4-220ENST00000567720 KYAT1Q16773 422 aa18.75■□□□□ 0.59
COMMD4-220ENST00000567720 ARMCX5Q6P1M9 558 aa18.75■□□□□ 0.59
COMMD4-220ENST00000567720 MICALL1Q8N3F8 863 aa18.75■□□□□ 0.59
COMMD4-220ENST00000567720 TMEM130Q8N3G9 435 aa18.75■□□□□ 0.59
COMMD4-220ENST00000567720 SPATA20Q8TB22 786 aa18.75■□□□□ 0.59
COMMD4-220ENST00000567720 RABGGTAQ92696 567 aa18.75■□□□□ 0.59
COMMD4-220ENST00000567720 TMEM169Q96HH4 297 aa18.75■□□□□ 0.59
COMMD4-220ENST00000567720 AGPAT3Q9NRZ7 376 aa18.75■□□□□ 0.59
COMMD4-220ENST00000567720 LMBRD1Q9NUN5 540 aa18.75■□□□□ 0.59
COMMD4-220ENST00000567720 PCDHGC5Q9Y5F6 944 aa18.75■□□□□ 0.59
COMMD4-220ENST00000567720 KIF4AO95239 1232 aa18.74■□□□□ 0.59
COMMD4-220ENST00000567720 WNT7BP56706 349 aa18.74■□□□□ 0.59
COMMD4-220ENST00000567720 PPP2R3AQ06190 1150 aa18.74■□□□□ 0.59
COMMD4-220ENST00000567720 SPAG1Q07617 926 aa18.74■□□□□ 0.59
COMMD4-220ENST00000567720 PTPROQ16827 1216 aa18.74■□□□□ 0.59
COMMD4-220ENST00000567720 ELOA2Q8IYF1 753 aaPredicted RBP18.74■□□□□ 0.59
COMMD4-220ENST00000567720 SMYD4Q8IYR2 804 aaPredicted RBP18.74■□□□□ 0.59
COMMD4-220ENST00000567720 MAFAQ8NHW3 353 aaPredicted RBP18.74■□□□□ 0.59
COMMD4-220ENST00000567720 CCDC47Q96A33 483 aaKnown RBP18.74■□□□□ 0.59
COMMD4-220ENST00000567720 C18orf25Q96B23 403 aaPredicted RBP18.74■□□□□ 0.59
COMMD4-220ENST00000567720 PCIF1Q9H4Z3 704 aa18.74■□□□□ 0.59
COMMD4-220ENST00000567720 RPF1Q9H9Y2 349 aaKnown RBP18.74■□□□□ 0.59
COMMD4-220ENST00000567720 TLR9Q9NR96 1032 aa18.74■□□□□ 0.59
COMMD4-220ENST00000567720 LMCD1Q9NZU5 365 aa18.74■□□□□ 0.59
COMMD4-220ENST00000567720 TUBGCP4Q9UGJ1 667 aa18.74■□□□□ 0.59
COMMD4-220ENST00000567720 LZTS1Q9Y250 596 aa18.74■□□□□ 0.59
COMMD4-220ENST00000567720 PCDHA5Q9Y5H7 936 aa18.74■□□□□ 0.59
COMMD4-220ENST00000567720 CARNS1A5YM72 827 aa18.73■□□□□ 0.59
COMMD4-220ENST00000567720 GOLGA8IPA6NC78 632 aa18.73■□□□□ 0.59
COMMD4-220ENST00000567720 GOLGA8JA6NMD2 632 aa18.73■□□□□ 0.59
COMMD4-220ENST00000567720 LACTBL1A8MY62 500 aa18.73■□□□□ 0.59
COMMD4-220ENST00000567720 ADRB2P07550 413 aa18.73■□□□□ 0.59
COMMD4-220ENST00000567720 KNOP1Q1ED39 458 aaKnown RBP18.73■□□□□ 0.59
COMMD4-220ENST00000567720 TIGD5Q53EQ6 642 aa18.73■□□□□ 0.59
COMMD4-220ENST00000567720 BRSK2Q8IWQ3 736 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms