RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 IP6K2Q9UHH9 426 aa13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 STRIP2Q9ULQ0 834 aa13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 KDM4FA0A1W2PPD8 638 aa13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 ELF3P78545 371 aaPredicted RBP13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 KLHDC7AQ5VTJ3 777 aa13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 GJB7Q6PEY0 223 aa13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 ILDR1Q86SU0 546 aaPredicted RBP13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 ALKBH8Q96BT7 664 aaKnown RBP13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 FAM20AQ96MK3 541 aa13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 ADPGKQ9BRR6 497 aa13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 EIF2AQ9BY44 585 aaKnown RBP13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 NRBP2Q9NSY0 501 aa13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 STX18Q9P2W9 335 aaKnown RBP13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 ERVV-1B6SEH8 477 aa13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 F8VZ95 297 aa13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 SRGAP2BP0DMP2 458 aa13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 FMO5P49326 533 aa13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 CACNA2D1P54289 1103 aa13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 DSG1Q02413 1049 aa13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 ZNF844Q08AG5 666 aa13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 TAF12Q16514 161 aa13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 EXT2Q93063 718 aa13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 FAM213AQ9BRX8 229 aa13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 CDCA7Q9BWT1 371 aaPredicted RBP13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 MANSC1Q9H8J5 431 aa13.11□□□□□ -0.31
CSPG4P13-202ENST00000567704 ATP9AO75110 1047 aa13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 CALB1P05937 261 aa13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 FIGNQ5HY92 759 aa13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 PRPF39Q86UA1 669 aaKnown RBP13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 NMD3Q96D46 503 aaKnown RBP13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 HEXIM2Q96MH2 286 aaKnown RBP13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 CCT7Q99832 543 aa13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 NRKQ7Z2Y5 1582 aa13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 O00370 1275 aa13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 PDE2AO00408 941 aaPredicted RBP13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 ENO3P13929 434 aaPredicted RBP13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 NT5C2P49902 561 aa13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 CDK17Q00537 523 aa13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 MSTO1Q9BUK6 570 aa13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 MRPL40Q9NQ50 206 aaKnown RBP13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 UVRAGQ9P2Y5 699 aa13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 IPO11Q9UI26 975 aaKnown RBP13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 ZNF229Q9UJW7 825 aa13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 NEXMIFQ5QGS0 1516 aa13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 K7ERI5 159 aa13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 ASAP2O43150 1006 aa13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 MYBL2P10244 700 aa13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 MAP4P27816 1152 aaKnown RBP13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 ALDH5A1P51649 535 aaPredicted RBP13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 ERVK-9P63128 1117 aa13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 EFTUD2Q15029 972 aaKnown RBP eCLIP13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 CREG2Q8IUH2 290 aa13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 PRCCQ92733 491 aaPredicted RBP13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 KCNK16Q96T55 309 aa13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 SEMA4AQ9H3S1 761 aa13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 METTL5Q9NRN9 209 aaKnown RBP13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 TRAPPC3O43617 180 aa13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 RARGP13631 454 aa13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 GNA15P30679 374 aa13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 TLR10Q9BXR5 811 aa13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 OSBPL8Q9BZF1 889 aa13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 SHCBP1LQ9BZQ2 653 aa13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 TMEM117Q9H0C3 514 aa13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 RXFP1Q9HBX9 757 aa13.1□□□□□ -0.31
CSPG4P13-202ENST00000567704 SETD1BQ9UPS6 1966 aaKnown RBP13.09□□□□□ -0.31
CSPG4P13-202ENST00000567704 ITGA4P13612 1032 aa13.09□□□□□ -0.31
CSPG4P13-202ENST00000567704 HABP4Q5JVS0 413 aaKnown RBP13.09□□□□□ -0.31
CSPG4P13-202ENST00000567704 LRRC8EQ6NSJ5 796 aa13.09□□□□□ -0.31
CSPG4P13-202ENST00000567704 C3orf62Q6ZUJ4 267 aa13.09□□□□□ -0.31
CSPG4P13-202ENST00000567704 CYFIP1Q7L576 1253 aa13.09□□□□□ -0.31
CSPG4P13-202ENST00000567704 ARID3BQ8IVW6 561 aaPredicted RBP13.09□□□□□ -0.31
CSPG4P13-202ENST00000567704 PDE5AO76074 875 aa13.09□□□□□ -0.31
CSPG4P13-202ENST00000567704 RFX5P48382 616 aaPredicted RBP13.09□□□□□ -0.31
CSPG4P13-202ENST00000567704 EDRF1Q3B7T1 1238 aa13.09□□□□□ -0.31
CSPG4P13-202ENST00000567704 MEI1Q5TIA1 1274 aa13.09□□□□□ -0.31
CSPG4P13-202ENST00000567704 DNAAF5Q86Y56 855 aa13.09□□□□□ -0.31
CSPG4P13-202ENST00000567704 ACTRT1Q8TDG2 376 aa13.09□□□□□ -0.31
CSPG4P13-202ENST00000567704 MAGEB18Q96M61 343 aa13.09□□□□□ -0.31
CSPG4P13-202ENST00000567704 ISCA1Q9BUE6 129 aa13.09□□□□□ -0.31
CSPG4P13-202ENST00000567704 DDX28Q9NUL7 540 aaKnown RBP13.09□□□□□ -0.31
CSPG4P13-202ENST00000567704 BSDC1Q9NW68 430 aaPredicted RBP13.09□□□□□ -0.31
CSPG4P13-202ENST00000567704 RGL1Q9NZL6 768 aa13.09□□□□□ -0.31
CSPG4P13-202ENST00000567704 SEL1LQ9UBV2 794 aa13.09□□□□□ -0.31
CSPG4P13-202ENST00000567704 AURKCQ9UQB9 309 aa13.09□□□□□ -0.31
CSPG4P13-202ENST00000567704 UTYO14607 1347 aa13.09□□□□□ -0.31
CSPG4P13-202ENST00000567704 NBPF26B4DH59 902 aa13.09□□□□□ -0.31
CSPG4P13-202ENST00000567704 AIM2O14862 343 aa13.09□□□□□ -0.31
CSPG4P13-202ENST00000567704 E2F6O75461 281 aa13.09□□□□□ -0.31
CSPG4P13-202ENST00000567704 SLC1A1P43005 524 aa13.09□□□□□ -0.31
CSPG4P13-202ENST00000567704 PRELPP51888 382 aa13.09□□□□□ -0.31
CSPG4P13-202ENST00000567704 SLC13A5Q86YT5 568 aaPredicted RBP13.09□□□□□ -0.31
CSPG4P13-202ENST00000567704 NBPF15Q8N660 670 aa13.09□□□□□ -0.31
CSPG4P13-202ENST00000567704 GPR101Q96P66 508 aaPredicted RBP13.09□□□□□ -0.31
CSPG4P13-202ENST00000567704 CYP26B1Q9NR63 512 aa13.09□□□□□ -0.31
CSPG4P13-202ENST00000567704 NEMP1O14524 444 aa13.09□□□□□ -0.31
CSPG4P13-202ENST00000567704 KRT7P08729 469 aa13.09□□□□□ -0.31
CSPG4P13-202ENST00000567704 FBXL13Q8NEE6 735 aa13.09□□□□□ -0.31
CSPG4P13-202ENST00000567704 THAP2Q9H0W7 228 aa13.09□□□□□ -0.31
CSPG4P13-202ENST00000567704 CCDC134Q9H6E4 229 aa13.09□□□□□ -0.31
CSPG4P13-202ENST00000567704 SETBP1Q9Y6X0 1596 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms