RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 ERCC4Q92889 916 aaPredicted RBP16.51■□□□□ 0.23
COMMD4-219ENST00000567399 SNX27Q96L92 541 aa16.51■□□□□ 0.23
COMMD4-219ENST00000567399 GSDMAQ96QA5 445 aa16.51■□□□□ 0.23
COMMD4-219ENST00000567399 FAM213AQ9BRX8 229 aa16.51■□□□□ 0.23
COMMD4-219ENST00000567399 LMAN2LQ9H0V9 348 aa16.51■□□□□ 0.23
COMMD4-219ENST00000567399 PLEKHA5Q9HAU0 1116 aa16.51■□□□□ 0.23
COMMD4-219ENST00000567399 SLC38A7Q9NVC3 462 aa16.51■□□□□ 0.23
COMMD4-219ENST00000567399 SMIM28A0A1B0GU29 152 aa16.5■□□□□ 0.23
COMMD4-219ENST00000567399 CASTOR2A6NHX0 329 aa16.5■□□□□ 0.23
COMMD4-219ENST00000567399 NRP1O14786 923 aa16.5■□□□□ 0.23
COMMD4-219ENST00000567399 KIAA0391O15091 583 aaKnown RBP16.5■□□□□ 0.23
COMMD4-219ENST00000567399 GRM6O15303 877 aa16.5■□□□□ 0.23
COMMD4-219ENST00000567399 LPXNO60711 386 aa16.5■□□□□ 0.23
COMMD4-219ENST00000567399 ITGB1P05556 798 aa16.5■□□□□ 0.23
COMMD4-219ENST00000567399 SNRPFP62306 86 aaKnown RBP16.5■□□□□ 0.23
COMMD4-219ENST00000567399 TUSC3Q13454 348 aa16.5■□□□□ 0.23
COMMD4-219ENST00000567399 HSP90AA2PQ14568 343 aaPredicted RBP16.5■□□□□ 0.23
COMMD4-219ENST00000567399 CAMK4Q16566 473 aa16.5■□□□□ 0.23
COMMD4-219ENST00000567399 SLC10A6Q3KNW5 377 aa16.5■□□□□ 0.23
COMMD4-219ENST00000567399 ELOA2Q8IYF1 753 aaPredicted RBP16.5■□□□□ 0.23
COMMD4-219ENST00000567399 COLGALT2Q8IYK4 626 aa16.5■□□□□ 0.23
COMMD4-219ENST00000567399 SLC39A11Q8N1S5 342 aa16.5■□□□□ 0.23
COMMD4-219ENST00000567399 GSTCDQ8NEC7 633 aa16.5■□□□□ 0.23
COMMD4-219ENST00000567399 GOLGA5Q8TBA6 731 aa16.5■□□□□ 0.23
COMMD4-219ENST00000567399 SPPL3Q8TCT6 385 aa16.5■□□□□ 0.23
COMMD4-219ENST00000567399 SAAL1Q96ER3 474 aa16.5■□□□□ 0.23
COMMD4-219ENST00000567399 MAPK8IP1Q9UQF2 711 aa16.5■□□□□ 0.23
COMMD4-219ENST00000567399 PCDHA5Q9Y5H7 936 aa16.5■□□□□ 0.23
COMMD4-219ENST00000567399 STYXL1Q9Y6J8 313 aa16.5■□□□□ 0.23
COMMD4-219ENST00000567399 RANBP2P49792 3224 aaKnown RBP16.49■□□□□ 0.23
COMMD4-219ENST00000567399 GOLGA8IPA6NC78 632 aa16.49■□□□□ 0.23
COMMD4-219ENST00000567399 GOLGA8JA6NMD2 632 aa16.49■□□□□ 0.23
COMMD4-219ENST00000567399 LACTBL1A8MY62 500 aa16.49■□□□□ 0.23
COMMD4-219ENST00000567399 PTGESO14684 152 aa16.49■□□□□ 0.23
COMMD4-219ENST00000567399 CLIC2O15247 247 aa16.49■□□□□ 0.23
COMMD4-219ENST00000567399 XPOTO43592 962 aaKnown RBP16.49■□□□□ 0.23
COMMD4-219ENST00000567399 EXTL3O43909 919 aa16.49■□□□□ 0.23
COMMD4-219ENST00000567399 TADA2AO75478 443 aa16.49■□□□□ 0.23
COMMD4-219ENST00000567399 ADSSP30520 456 aa16.49■□□□□ 0.23
COMMD4-219ENST00000567399 PLCB3Q01970 1234 aa16.49■□□□□ 0.23
COMMD4-219ENST00000567399 UBE3AQ05086 875 aa16.49■□□□□ 0.23
COMMD4-219ENST00000567399 SPAG1Q07617 926 aa16.49■□□□□ 0.23
COMMD4-219ENST00000567399 ADGRE1Q14246 886 aa16.49■□□□□ 0.23
COMMD4-219ENST00000567399 CCDC85BQ15834 202 aaPredicted RBP16.49■□□□□ 0.23
COMMD4-219ENST00000567399 BMT2Q1RMZ1 405 aa16.49■□□□□ 0.23
COMMD4-219ENST00000567399 ZBTB41Q5SVQ8 909 aa16.49■□□□□ 0.23
COMMD4-219ENST00000567399 ISM2Q6H9L7 571 aa16.49■□□□□ 0.23
COMMD4-219ENST00000567399 CD302Q8IX05 232 aa16.49■□□□□ 0.23
COMMD4-219ENST00000567399 GPD1LQ8N335 351 aa16.49■□□□□ 0.23
COMMD4-219ENST00000567399 KIAA0895Q8NCT3 520 aa16.49■□□□□ 0.23
COMMD4-219ENST00000567399 MRPL38Q96DV4 380 aaKnown RBP16.49■□□□□ 0.23
COMMD4-219ENST00000567399 KIF12Q96FN5 646 aa16.49■□□□□ 0.23
COMMD4-219ENST00000567399 IGSF21Q96ID5 467 aa16.49■□□□□ 0.23
COMMD4-219ENST00000567399 CBWD1Q9BRT8 395 aa16.49■□□□□ 0.23
COMMD4-219ENST00000567399 GTPBP4Q9BZE4 634 aaKnown RBP16.49■□□□□ 0.23
COMMD4-219ENST00000567399 CXCL16Q9H2A7 254 aa16.49■□□□□ 0.23
COMMD4-219ENST00000567399 ENTPD7Q9NQZ7 604 aa16.49■□□□□ 0.23
COMMD4-219ENST00000567399 LMBRD1Q9NUN5 540 aa16.49■□□□□ 0.23
COMMD4-219ENST00000567399 LMCD1Q9NZU5 365 aa16.49■□□□□ 0.23
COMMD4-219ENST00000567399 CGNQ9P2M7 1197 aaKnown RBP16.49■□□□□ 0.23
COMMD4-219ENST00000567399 CPSF3Q9UKF6 684 aaKnown RBP16.49■□□□□ 0.23
COMMD4-219ENST00000567399 RALGAPA2Q2PPJ7 1873 aa16.48■□□□□ 0.23
COMMD4-219ENST00000567399 CALUO43852 315 aaPredicted RBP16.48■□□□□ 0.23
COMMD4-219ENST00000567399 KCNE1P15382 129 aa16.48■□□□□ 0.23
COMMD4-219ENST00000567399 HOXD13P35453 343 aa16.48■□□□□ 0.23
COMMD4-219ENST00000567399 CYP2J2P51589 502 aa16.48■□□□□ 0.23
COMMD4-219ENST00000567399 DSC1Q08554 894 aa16.48■□□□□ 0.23
COMMD4-219ENST00000567399 SKIV2LQ15477 1246 aaKnown RBP16.48■□□□□ 0.23
COMMD4-219ENST00000567399 ENOX2Q16206 610 aaKnown RBP16.48■□□□□ 0.23
COMMD4-219ENST00000567399 ALKAL1Q6UXT8 129 aa16.48■□□□□ 0.23
COMMD4-219ENST00000567399 TMC7Q7Z402 723 aa16.48■□□□□ 0.23
COMMD4-219ENST00000567399 RDH13Q8NBN7 331 aa16.48■□□□□ 0.23
COMMD4-219ENST00000567399 RABGGTAQ92696 567 aa16.48■□□□□ 0.23
COMMD4-219ENST00000567399 PPP2R3CQ969Q6 453 aa16.48■□□□□ 0.23
COMMD4-219ENST00000567399 UROC1Q96N76 676 aa16.48■□□□□ 0.23
COMMD4-219ENST00000567399 KIAA1586Q9HCI6 787 aa16.48■□□□□ 0.23
COMMD4-219ENST00000567399 TLR9Q9NR96 1032 aa16.48■□□□□ 0.23
COMMD4-219ENST00000567399 AGPAT3Q9NRZ7 376 aa16.48■□□□□ 0.23
COMMD4-219ENST00000567399 HSPBP1Q9NZL4 362 aa16.48■□□□□ 0.23
COMMD4-219ENST00000567399 CNTN3Q9P232 1028 aa16.48■□□□□ 0.23
COMMD4-219ENST00000567399 STXBP5LQ9Y2K9 1186 aa16.48■□□□□ 0.23
COMMD4-219ENST00000567399 MTCH2Q9Y6C9 303 aa16.48■□□□□ 0.23
COMMD4-219ENST00000567399 ZNF233A6NK53 670 aa16.47■□□□□ 0.23
COMMD4-219ENST00000567399 TGFB1I1O43294 461 aa16.47■□□□□ 0.23
COMMD4-219ENST00000567399 EXOC3O60645 756 aa16.47■□□□□ 0.23
COMMD4-219ENST00000567399 IL18RAPO95256 599 aa16.47■□□□□ 0.23
COMMD4-219ENST00000567399 STIM1Q13586 685 aa16.47■□□□□ 0.23
COMMD4-219ENST00000567399 TIGD5Q53EQ6 642 aa16.47■□□□□ 0.23
COMMD4-219ENST00000567399 XKR4Q5GH76 650 aa16.47■□□□□ 0.23
COMMD4-219ENST00000567399 ZNF658Q5TYW1 1059 aaPredicted RBP16.47■□□□□ 0.23
COMMD4-219ENST00000567399 DDX27Q96GQ7 796 aaKnown RBP16.47■□□□□ 0.23
COMMD4-219ENST00000567399 PPP1R10Q96QC0 940 aaKnown RBP16.47■□□□□ 0.23
COMMD4-219ENST00000567399 TSPAN18Q96SJ8 248 aa16.47■□□□□ 0.23
COMMD4-219ENST00000567399 RBAKQ9NYW8 714 aaPredicted RBP16.47■□□□□ 0.23
COMMD4-219ENST00000567399 STK39Q9UEW8 545 aa16.47■□□□□ 0.23
COMMD4-219ENST00000567399 LZTS1Q9Y250 596 aa16.47■□□□□ 0.23
COMMD4-219ENST00000567399 NLRC5Q86WI3 1866 aa16.47■□□□□ 0.23
COMMD4-219ENST00000567399 TTC26A0AVF1 554 aa16.46■□□□□ 0.23
COMMD4-219ENST00000567399 B4GALT3O60512 393 aa16.46■□□□□ 0.23
COMMD4-219ENST00000567399 POU5F1Q01860 360 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms