RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 PPP1R10Q96QC0 940 aaKnown RBP15.66■□□□□ 0.1
COMMD4-216ENST00000567023 NT5C3AQ9H0P0 336 aa15.66■□□□□ 0.1
COMMD4-216ENST00000567023 WDR6Q9NNW5 1121 aaKnown RBP15.66■□□□□ 0.1
COMMD4-216ENST00000567023 ZDHHC7Q9NXF8 308 aa15.66■□□□□ 0.1
COMMD4-216ENST00000567023 KCND2Q9NZV8 630 aa15.66■□□□□ 0.1
COMMD4-216ENST00000567023 GDAQ9Y2T3 454 aa15.66■□□□□ 0.1
COMMD4-216ENST00000567023 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.66■□□□□ 0.1
COMMD4-216ENST00000567023 ZDBF2Q9HCK1 2354 aa15.66■□□□□ 0.1
COMMD4-216ENST00000567023 MTCL1Q9Y4B5 1905 aaKnown RBP15.66■□□□□ 0.1
COMMD4-216ENST00000567023 USP34Q70CQ2 3546 aa15.65■□□□□ 0.1
COMMD4-216ENST00000567023 ASGR2P07307 311 aa15.65■□□□□ 0.1
COMMD4-216ENST00000567023 PROZP22891 400 aa15.65■□□□□ 0.1
COMMD4-216ENST00000567023 GRM5P41594 1212 aa15.65■□□□□ 0.1
COMMD4-216ENST00000567023 IER5LQ5T953 404 aa15.65■□□□□ 0.1
COMMD4-216ENST00000567023 FAM171A1Q5VUB5 890 aa15.65■□□□□ 0.1
COMMD4-216ENST00000567023 LNX1Q8TBB1 728 aaPredicted RBP15.65■□□□□ 0.1
COMMD4-216ENST00000567023 SPIRE2Q8WWL2 714 aa15.65■□□□□ 0.1
COMMD4-216ENST00000567023 ZNF707Q96C28 371 aaPredicted RBP15.65■□□□□ 0.1
COMMD4-216ENST00000567023 AK8Q96MA6 479 aa15.65■□□□□ 0.1
COMMD4-216ENST00000567023 PNMA5Q96PV4 448 aa15.65■□□□□ 0.1
COMMD4-216ENST00000567023 TTPALQ9BTX7 342 aa15.65■□□□□ 0.1
COMMD4-216ENST00000567023 MRPL4Q9BYD3 311 aaKnown RBP15.65■□□□□ 0.1
COMMD4-216ENST00000567023 KMT5AQ9NQR1 393 aa15.65■□□□□ 0.1
COMMD4-216ENST00000567023 SMC3Q9UQE7 1217 aa15.65■□□□□ 0.1
COMMD4-216ENST00000567023 PIEZO1Q92508 2521 aa15.65■□□□□ 0.1
COMMD4-216ENST00000567023 SLC26A4O43511 780 aa15.64■□□□□ 0.09
COMMD4-216ENST00000567023 RFPL2O75678 378 aa15.64■□□□□ 0.09
COMMD4-216ENST00000567023 SPATA31D3P0C874 917 aa15.64■□□□□ 0.09
COMMD4-216ENST00000567023 SLC12A3P55017 1021 aa15.64■□□□□ 0.09
COMMD4-216ENST00000567023 UPP1Q16831 310 aa15.64■□□□□ 0.09
COMMD4-216ENST00000567023 PDXDC1Q6P996 788 aa15.64■□□□□ 0.09
COMMD4-216ENST00000567023 DCLRE1AQ6PJP8 1040 aa15.64■□□□□ 0.09
COMMD4-216ENST00000567023 SPATA31D4Q6ZUB0 917 aa15.64■□□□□ 0.09
COMMD4-216ENST00000567023 HASPINQ8TF76 798 aa15.64■□□□□ 0.09
COMMD4-216ENST00000567023 STAMQ92783 540 aa15.64■□□□□ 0.09
COMMD4-216ENST00000567023 KCNN1Q92952 543 aa15.64■□□□□ 0.09
COMMD4-216ENST00000567023 UROC1Q96N76 676 aa15.64■□□□□ 0.09
COMMD4-216ENST00000567023 CLSTN3Q9BQT9 956 aa15.64■□□□□ 0.09
COMMD4-216ENST00000567023 BACH2Q9BYV9 841 aa15.64■□□□□ 0.09
COMMD4-216ENST00000567023 CDT1Q9H211 546 aa15.64■□□□□ 0.09
COMMD4-216ENST00000567023 TOPORSQ9NS56 1045 aaPredicted RBP15.64■□□□□ 0.09
COMMD4-216ENST00000567023 MYO15AQ9UKN7 3530 aa15.64■□□□□ 0.09
COMMD4-216ENST00000567023 SMIM28A0A1B0GU29 152 aa15.63■□□□□ 0.09
COMMD4-216ENST00000567023 VWA3AA6NCI4 1184 aa15.63■□□□□ 0.09
COMMD4-216ENST00000567023 SFI1A8K8P3 1242 aa15.63■□□□□ 0.09
COMMD4-216ENST00000567023 ABLIM1O14639 778 aa15.63■□□□□ 0.09
COMMD4-216ENST00000567023 N4BP1O75113 896 aaKnown RBP15.63■□□□□ 0.09
COMMD4-216ENST00000567023 B3GAT3O94766 335 aa15.63■□□□□ 0.09
COMMD4-216ENST00000567023 MCF2P10911 925 aa15.63■□□□□ 0.09
COMMD4-216ENST00000567023 PLS3P13797 630 aa15.63■□□□□ 0.09
COMMD4-216ENST00000567023 RPL17P18621 184 aaKnown RBP15.63■□□□□ 0.09
COMMD4-216ENST00000567023 AVPR2P30518 371 aa15.63■□□□□ 0.09
COMMD4-216ENST00000567023 CLCNKBP51801 687 aa15.63■□□□□ 0.09
COMMD4-216ENST00000567023 NUBP1P53384 320 aa15.63■□□□□ 0.09
COMMD4-216ENST00000567023 TDGQ13569 410 aa15.63■□□□□ 0.09
COMMD4-216ENST00000567023 TMEM119Q4V9L6 283 aa15.63■□□□□ 0.09
COMMD4-216ENST00000567023 LARP1BQ659C4 914 aaKnown RBP15.63■□□□□ 0.09
COMMD4-216ENST00000567023 PRSS55Q6UWB4 352 aaPredicted RBP15.63■□□□□ 0.09
COMMD4-216ENST00000567023 CD300LGQ6UXG3 332 aa15.63■□□□□ 0.09
COMMD4-216ENST00000567023 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.63■□□□□ 0.09
COMMD4-216ENST00000567023 CEP120Q8N960 986 aa15.63■□□□□ 0.09
COMMD4-216ENST00000567023 PRSS33Q8NF86 280 aa15.63■□□□□ 0.09
COMMD4-216ENST00000567023 SMG7Q92540 1137 aaKnown RBP15.63■□□□□ 0.09
COMMD4-216ENST00000567023 CCDC94Q9BW85 323 aaPredicted RBP15.63■□□□□ 0.09
COMMD4-216ENST00000567023 TARS2Q9BW92 718 aaKnown RBP15.63■□□□□ 0.09
COMMD4-216ENST00000567023 PRKD2Q9BZL6 878 aa15.63■□□□□ 0.09
COMMD4-216ENST00000567023 SMOC2Q9H3U7 446 aa15.63■□□□□ 0.09
COMMD4-216ENST00000567023 KCNK12Q9HB15 430 aa15.63■□□□□ 0.09
COMMD4-216ENST00000567023 IGSF9Q9P2J2 1179 aa15.63■□□□□ 0.09
COMMD4-216ENST00000567023 EPS15L1Q9UBC2 864 aa15.63■□□□□ 0.09
COMMD4-216ENST00000567023 TOM1L1O75674 476 aa15.62■□□□□ 0.09
COMMD4-216ENST00000567023 ZMYND10O75800 440 aa15.62■□□□□ 0.09
COMMD4-216ENST00000567023 PDGFBP01127 241 aaPredicted RBP15.62■□□□□ 0.09
COMMD4-216ENST00000567023 FGFR3P22607 806 aa15.62■□□□□ 0.09
COMMD4-216ENST00000567023 SMTNP53814 917 aa15.62■□□□□ 0.09
COMMD4-216ENST00000567023 YARSP54577 528 aaKnown RBP15.62■□□□□ 0.09
COMMD4-216ENST00000567023 VCPP55072 806 aaKnown RBP15.62■□□□□ 0.09
COMMD4-216ENST00000567023 PSMD5Q16401 504 aa15.62■□□□□ 0.09
COMMD4-216ENST00000567023 ZNF568Q3ZCX4 644 aa15.62■□□□□ 0.09
COMMD4-216ENST00000567023 GLRA4Q5JXX5 417 aa15.62■□□□□ 0.09
COMMD4-216ENST00000567023 MPZL3Q6UWV2 235 aa15.62■□□□□ 0.09
COMMD4-216ENST00000567023 BRAPQ7Z569 592 aa15.62■□□□□ 0.09
COMMD4-216ENST00000567023 CEP57Q86XR8 500 aa15.62■□□□□ 0.09
COMMD4-216ENST00000567023 GLYCTKQ8IVS8 523 aa15.62■□□□□ 0.09
COMMD4-216ENST00000567023 TMEM161BQ8NDZ6 487 aa15.62■□□□□ 0.09
COMMD4-216ENST00000567023 NXPE3Q969Y0 559 aa15.62■□□□□ 0.09
COMMD4-216ENST00000567023 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.62■□□□□ 0.092e-7■■□□□ 14.4
COMMD4-216ENST00000567023 FBXW11Q9UKB1 542 aa15.62■□□□□ 0.09
COMMD4-216ENST00000567023 KMT2EQ8IZD2 1858 aa15.62■□□□□ 0.09
COMMD4-216ENST00000567023 DMDP11532 3685 aa15.62■□□□□ 0.09
COMMD4-216ENST00000567023 CLUHO75153 1309 aa15.62■□□□□ 0.09
COMMD4-216ENST00000567023 TRIP11Q15643 1979 aa15.62■□□□□ 0.09
COMMD4-216ENST00000567023 SLC16A4O15374 487 aa15.61■□□□□ 0.09
COMMD4-216ENST00000567023 TRAPPC3O43617 180 aa15.61■□□□□ 0.09
COMMD4-216ENST00000567023 BMP15O95972 392 aa15.61■□□□□ 0.09
COMMD4-216ENST00000567023 PLA2G4BP0C869 781 aa15.61■□□□□ 0.09
COMMD4-216ENST00000567023 MYBP10242 640 aa15.61■□□□□ 0.09
COMMD4-216ENST00000567023 KCNE1P15382 129 aa15.61■□□□□ 0.09
COMMD4-216ENST00000567023 IGFBP6P24592 240 aaPredicted RBP15.61■□□□□ 0.09
COMMD4-216ENST00000567023 HOXA9P31269 272 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms