RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 ITGB5P18084 799 aa6.15□□□□□ -1.42
CNOT1-209ENST00000566240 GUCY1A2P33402 732 aa6.15□□□□□ -1.42
CNOT1-209ENST00000566240 STT3AP46977 705 aa6.15□□□□□ -1.42
CNOT1-209ENST00000566240 JAG1P78504 1218 aa6.15□□□□□ -1.42
CNOT1-209ENST00000566240 PCOLCEQ15113 449 aa6.15□□□□□ -1.42
CNOT1-209ENST00000566240 KHDC1LQ5JSQ8 128 aa6.15□□□□□ -1.42
CNOT1-209ENST00000566240 IZUMO3Q5VZ72 239 aa6.15□□□□□ -1.42
CNOT1-209ENST00000566240 OGFOD2Q6N063 350 aa6.15□□□□□ -1.42
CNOT1-209ENST00000566240 APBB1IPQ7Z5R6 666 aaPredicted RBP6.15□□□□□ -1.42
CNOT1-209ENST00000566240 TRMT2AQ8IZ69 625 aaKnown RBP6.15□□□□□ -1.42
CNOT1-209ENST00000566240 REPS2Q8NFH8 660 aa6.15□□□□□ -1.42
CNOT1-209ENST00000566240 STON2Q8WXE9 905 aa6.15□□□□□ -1.42
CNOT1-209ENST00000566240 GCDHQ92947 438 aaPredicted RBP6.15□□□□□ -1.42
CNOT1-209ENST00000566240 CRB3Q9BUF7 120 aa6.15□□□□□ -1.42
CNOT1-209ENST00000566240 WDR12Q9GZL7 423 aaKnown RBP6.15□□□□□ -1.42
CNOT1-209ENST00000566240 KATNBL1Q9H079 304 aa6.15□□□□□ -1.42
CNOT1-209ENST00000566240 VPS11Q9H270 941 aa6.15□□□□□ -1.42
CNOT1-209ENST00000566240 L2HGDHQ9H9P8 463 aa6.15□□□□□ -1.42
CNOT1-209ENST00000566240 CERS4Q9HA82 394 aa6.15□□□□□ -1.42
CNOT1-209ENST00000566240 GCM1Q9NP62 436 aa6.15□□□□□ -1.42
CNOT1-209ENST00000566240 CNNM1Q9NRU3 951 aa6.15□□□□□ -1.42
CNOT1-209ENST00000566240 GPRC5BQ9NZH0 403 aa6.15□□□□□ -1.42
CNOT1-209ENST00000566240 AJAP1Q9UKB5 411 aaPredicted RBP6.15□□□□□ -1.42
CNOT1-209ENST00000566240 FAM184BQ9ULE4 1060 aa6.15□□□□□ -1.42
CNOT1-209ENST00000566240 PADI4Q9UM07 663 aa6.15□□□□□ -1.42
CNOT1-209ENST00000566240 PCDHA6Q9UN73 950 aa6.15□□□□□ -1.42
CNOT1-209ENST00000566240 RBM8AQ9Y5S9 174 aaKnown RBP6.15□□□□□ -1.42
CNOT1-209ENST00000566240 PMF1-BGLAPU3KQ54 211 aa6.15□□□□□ -1.42
CNOT1-209ENST00000566240 POM121BA6NF01 834 aa6.14□□□□□ -1.43
CNOT1-209ENST00000566240 NT5C1B-RDH14C9J2C7 533 aa6.14□□□□□ -1.43
CNOT1-209ENST00000566240 PIP5K1CO60331 668 aa6.14□□□□□ -1.43
CNOT1-209ENST00000566240 PLA2G1BP04054 148 aaKnown RBP6.14□□□□□ -1.43
CNOT1-209ENST00000566240 BRAFP15056 766 aa6.14□□□□□ -1.43
CNOT1-209ENST00000566240 NPR1P16066 1061 aa6.14□□□□□ -1.43
CNOT1-209ENST00000566240 ZNF28P17035 718 aa6.14□□□□□ -1.43
CNOT1-209ENST00000566240 TYRP1P17643 537 aa6.14□□□□□ -1.43
CNOT1-209ENST00000566240 PRDX5P30044 214 aa6.14□□□□□ -1.43
CNOT1-209ENST00000566240 PTPN7P35236 360 aa6.14□□□□□ -1.43
CNOT1-209ENST00000566240 PPM1AP35813 382 aa6.14□□□□□ -1.43
CNOT1-209ENST00000566240 MRE11P49959 708 aa6.14□□□□□ -1.43
CNOT1-209ENST00000566240 CTXN1P60606 82 aa6.14□□□□□ -1.43
CNOT1-209ENST00000566240 MTM1Q13496 603 aa6.14□□□□□ -1.43
CNOT1-209ENST00000566240 TRIM14Q14142 442 aa6.14□□□□□ -1.43
CNOT1-209ENST00000566240 Q6ZUG5 572 aa6.14□□□□□ -1.43
CNOT1-209ENST00000566240 PPP1R3BQ86XI6 285 aa6.14□□□□□ -1.43
CNOT1-209ENST00000566240 FBXO18Q8NFZ0 1043 aa6.14□□□□□ -1.43
CNOT1-209ENST00000566240 BRIX1Q8TDN6 353 aaKnown RBP6.14□□□□□ -1.43
CNOT1-209ENST00000566240 LPPQ93052 612 aa6.14□□□□□ -1.43
CNOT1-209ENST00000566240 KIAA1191Q96A73 305 aa6.14□□□□□ -1.43
CNOT1-209ENST00000566240 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.14□□□□□ -1.43
CNOT1-209ENST00000566240 UNKQ9C0B0 810 aaKnown RBP6.14□□□□□ -1.43
CNOT1-209ENST00000566240 PNPLA8Q9NP80 782 aa6.14□□□□□ -1.43
CNOT1-209ENST00000566240 SPATA6Q9NWH7 488 aaPredicted RBP6.14□□□□□ -1.43
CNOT1-209ENST00000566240 PIH1D1Q9NWS0 290 aaKnown RBP6.14□□□□□ -1.43
CNOT1-209ENST00000566240 FAM53CQ9NYF3 392 aa6.14□□□□□ -1.43
CNOT1-209ENST00000566240 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.14□□□□□ -1.43
CNOT1-209ENST00000566240 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.14□□□□□ -1.43
CNOT1-209ENST00000566240 CPNE7Q9UBL6 633 aa6.14□□□□□ -1.43
CNOT1-209ENST00000566240 CTDP1Q9Y5B0 961 aaPredicted RBP6.14□□□□□ -1.43
CNOT1-209ENST00000566240 F2RL2O00254 374 aa6.13□□□□□ -1.43
CNOT1-209ENST00000566240 DDX3XO00571 662 aaKnown RBP eCLIP6.13□□□□□ -1.43
CNOT1-209ENST00000566240 TBX3O15119 743 aa6.13□□□□□ -1.43
CNOT1-209ENST00000566240 IL18RAPO95256 599 aa6.13□□□□□ -1.43
CNOT1-209ENST00000566240 GYPEP15421 78 aa6.13□□□□□ -1.43
CNOT1-209ENST00000566240 ABCB4P21439 1286 aa6.13□□□□□ -1.43
CNOT1-209ENST00000566240 FPR1P21462 350 aa6.13□□□□□ -1.43
CNOT1-209ENST00000566240 RPL13P26373 211 aaKnown RBP6.13□□□□□ -1.43
CNOT1-209ENST00000566240 PCSK1P29120 753 aa6.13□□□□□ -1.43
CNOT1-209ENST00000566240 IL6STP40189 918 aaPredicted RBP6.13□□□□□ -1.43
CNOT1-209ENST00000566240 SUMO3P55854 103 aaPredicted RBP6.13□□□□□ -1.43
CNOT1-209ENST00000566240 DUSP2Q05923 314 aa6.13□□□□□ -1.43
CNOT1-209ENST00000566240 CIAPIN1Q6FI81 312 aa6.13□□□□□ -1.43
CNOT1-209ENST00000566240 SYDE1Q6ZW31 735 aaPredicted RBP6.13□□□□□ -1.43
CNOT1-209ENST00000566240 SESTD1Q86VW0 696 aa6.13□□□□□ -1.43
CNOT1-209ENST00000566240 FAM90A1Q86YD7 464 aa6.13□□□□□ -1.43
CNOT1-209ENST00000566240 CELF5Q8N6W0 485 aaKnown RBP6.13□□□□□ -1.43
CNOT1-209ENST00000566240 FNIP1Q8TF40 1166 aa6.13□□□□□ -1.43
CNOT1-209ENST00000566240 CASKIN2Q8WXE0 1202 aa6.13□□□□□ -1.43
CNOT1-209ENST00000566240 SLC7A6OSQ96CW6 309 aaPredicted RBP6.13□□□□□ -1.43
CNOT1-209ENST00000566240 SUCLG2Q96I99 432 aa6.13□□□□□ -1.43
CNOT1-209ENST00000566240 ZC3H10Q96K80 434 aaKnown RBP6.13□□□□□ -1.43
CNOT1-209ENST00000566240 MRGPRX1Q96LB2 322 aa6.13□□□□□ -1.43
CNOT1-209ENST00000566240 CARD11Q9BXL7 1154 aa6.13□□□□□ -1.43
CNOT1-209ENST00000566240 MRPL46Q9H2W6 279 aaKnown RBP6.13□□□□□ -1.43
CNOT1-209ENST00000566240 ACTL7AQ9Y615 435 aa6.13□□□□□ -1.43
CNOT1-209ENST00000566240 MORC2Q9Y6X9 1032 aaPredicted RBP6.13□□□□□ -1.43
CNOT1-209ENST00000566240 CARMIL2Q6F5E8 1435 aa6.13□□□□□ -1.43
CNOT1-209ENST00000566240 MTSS1O43312 755 aa6.12□□□□□ -1.43
CNOT1-209ENST00000566240 PPFIA4O75335 1185 aa6.12□□□□□ -1.43
CNOT1-209ENST00000566240 TOX4O94842 621 aa6.12□□□□□ -1.43
CNOT1-209ENST00000566240 IL2RBP14784 551 aa6.12□□□□□ -1.43
CNOT1-209ENST00000566240 TSHRP16473 764 aa6.12□□□□□ -1.43
CNOT1-209ENST00000566240 JUNBP17275 347 aaPredicted RBP6.12□□□□□ -1.43
CNOT1-209ENST00000566240 PPM1FP49593 454 aaPredicted RBP6.12□□□□□ -1.43
CNOT1-209ENST00000566240 DLG4P78352 724 aa6.12□□□□□ -1.43
CNOT1-209ENST00000566240 TNFAIP2Q03169 654 aa6.12□□□□□ -1.43
CNOT1-209ENST00000566240 DAG1Q14118 895 aa6.12□□□□□ -1.43
CNOT1-209ENST00000566240 ZNF827Q17R98 1081 aa6.12□□□□□ -1.43
CNOT1-209ENST00000566240 PRAMEF14Q5SWL7 426 aa6.12□□□□□ -1.43
CNOT1-209ENST00000566240 HIBCHQ6NVY1 386 aaPredicted RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms