RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 H7C0S8 307 aa11.62□□□□□ -0.55
UBFD1-205ENST00000566136 MAFKO60675 156 aa11.62□□□□□ -0.55
UBFD1-205ENST00000566136 UBXN7O94888 489 aa11.62□□□□□ -0.55
UBFD1-205ENST00000566136 LETM1O95202 739 aaPredicted RBP11.62□□□□□ -0.55
UBFD1-205ENST00000566136 ATP2A2P16615 1042 aaKnown RBP11.62□□□□□ -0.55
UBFD1-205ENST00000566136 C5AR1P21730 350 aa11.62□□□□□ -0.55
UBFD1-205ENST00000566136 MMP16P51512 607 aa11.62□□□□□ -0.55
UBFD1-205ENST00000566136 CEBPZQ03701 1054 aaKnown RBP11.62□□□□□ -0.55
UBFD1-205ENST00000566136 TSTQ16762 297 aaKnown RBP11.62□□□□□ -0.55
UBFD1-205ENST00000566136 RNF220Q5VTB9 566 aa11.62□□□□□ -0.55
UBFD1-205ENST00000566136 VASH1Q7L8A9 365 aaPredicted RBP11.62□□□□□ -0.55
UBFD1-205ENST00000566136 CREG2Q8IUH2 290 aa11.62□□□□□ -0.55
UBFD1-205ENST00000566136 CCDC33Q8N5R6 958 aa11.62□□□□□ -0.55
UBFD1-205ENST00000566136 TTLL6Q8N841 843 aa11.62□□□□□ -0.55
UBFD1-205ENST00000566136 FUCA2Q9BTY2 467 aa11.62□□□□□ -0.55
UBFD1-205ENST00000566136 CNTD2Q9H8S5 307 aa11.62□□□□□ -0.55
UBFD1-205ENST00000566136 TRAF5O00463 557 aa11.61□□□□□ -0.55
UBFD1-205ENST00000566136 KIF5CO60282 957 aa11.61□□□□□ -0.55
UBFD1-205ENST00000566136 KLHL41O60662 606 aa11.61□□□□□ -0.55
UBFD1-205ENST00000566136 INPP5BP32019 993 aa11.61□□□□□ -0.55
UBFD1-205ENST00000566136 SLC7A5Q01650 507 aa11.61□□□□□ -0.55
UBFD1-205ENST00000566136 GUCY1B3Q02153 619 aa11.61□□□□□ -0.55
UBFD1-205ENST00000566136 SCARB2Q14108 478 aa11.61□□□□□ -0.55
UBFD1-205ENST00000566136 TEAD4Q15561 434 aa11.61□□□□□ -0.55
UBFD1-205ENST00000566136 PFKFB4Q16877 469 aa11.61□□□□□ -0.55
UBFD1-205ENST00000566136 SMARCC2Q8TAQ2 1214 aa11.61□□□□□ -0.55
UBFD1-205ENST00000566136 SPSB2Q99619 263 aa11.61□□□□□ -0.55
UBFD1-205ENST00000566136 ALG1Q9BT22 464 aa11.61□□□□□ -0.55
UBFD1-205ENST00000566136 AGXT2Q9BYV1 514 aa11.61□□□□□ -0.55
UBFD1-205ENST00000566136 CCM2LQ9NUG4 571 aaPredicted RBP11.61□□□□□ -0.55
UBFD1-205ENST00000566136 KLHL3Q9UH77 587 aa11.61□□□□□ -0.55
UBFD1-205ENST00000566136 VPS28Q9UK41 221 aa11.61□□□□□ -0.55
UBFD1-205ENST00000566136 C2CD2Q9Y426 696 aa11.61□□□□□ -0.55
UBFD1-205ENST00000566136 GOLGA6L4A6NEF3 574 aa11.61□□□□□ -0.55
UBFD1-205ENST00000566136 LGALS16A8MUM7 142 aa11.61□□□□□ -0.55
UBFD1-205ENST00000566136 SNAP23O00161 211 aa11.61□□□□□ -0.55
UBFD1-205ENST00000566136 B3GALT2O43825 422 aa11.61□□□□□ -0.55
UBFD1-205ENST00000566136 URI1O94763 535 aaPredicted RBP11.61□□□□□ -0.55
UBFD1-205ENST00000566136 RHOQP17081 205 aa11.61□□□□□ -0.55
UBFD1-205ENST00000566136 ZER1Q7Z7L7 766 aa11.61□□□□□ -0.55
UBFD1-205ENST00000566136 ATG4CQ96DT6 458 aa11.61□□□□□ -0.55
UBFD1-205ENST00000566136 ZNF845Q96IR2 970 aaPredicted RBP11.61□□□□□ -0.55
UBFD1-205ENST00000566136 FTOQ9C0B1 505 aaKnown RBP eCLIP11.61□□□□□ -0.55
UBFD1-205ENST00000566136 SCAND2PQ9GZW5 306 aaPredicted RBP11.61□□□□□ -0.55
UBFD1-205ENST00000566136 TMEM51Q9NW97 253 aa11.61□□□□□ -0.55
UBFD1-205ENST00000566136 ANKRD31Q8N7Z5 1873 aa11.61□□□□□ -0.55
UBFD1-205ENST00000566136 ANKRD36CQ5JPF3 1778 aa11.6□□□□□ -0.55
UBFD1-205ENST00000566136 MYH3P11055 1940 aa11.6□□□□□ -0.55
UBFD1-205ENST00000566136 TGFBR3LH3BV60 316 aa11.6□□□□□ -0.55
UBFD1-205ENST00000566136 CDK2AP1O14519 115 aa11.6□□□□□ -0.55
UBFD1-205ENST00000566136 GPAA1O43292 621 aa11.6□□□□□ -0.55
UBFD1-205ENST00000566136 XYLBO75191 536 aa11.6□□□□□ -0.55
UBFD1-205ENST00000566136 TUSC2O75896 110 aa11.6□□□□□ -0.55
UBFD1-205ENST00000566136 TNFRSF6BO95407 300 aa11.6□□□□□ -0.55
UBFD1-205ENST00000566136 PORP16435 677 aaPredicted RBP11.6□□□□□ -0.55
UBFD1-205ENST00000566136 BMP6P22004 513 aa11.6□□□□□ -0.55
UBFD1-205ENST00000566136 ACSL1P33121 698 aa11.6□□□□□ -0.55
UBFD1-205ENST00000566136 SH3BGRP55822 239 aaPredicted RBP11.6□□□□□ -0.55
UBFD1-205ENST00000566136 HS1BP3Q53T59 392 aa11.6□□□□□ -0.55
UBFD1-205ENST00000566136 KRT25Q7Z3Z0 450 aa11.6□□□□□ -0.55
UBFD1-205ENST00000566136 TBC1D21Q8IYX1 336 aa11.6□□□□□ -0.55
UBFD1-205ENST00000566136 IL17RDQ8NFM7 739 aa11.6□□□□□ -0.55
UBFD1-205ENST00000566136 BRIP1Q9BX63 1249 aa11.6□□□□□ -0.55
UBFD1-205ENST00000566136 PIH1D3Q9NQM4 214 aaKnown RBP11.6□□□□□ -0.55
UBFD1-205ENST00000566136 KIF17Q9P2E2 1029 aa11.6□□□□□ -0.55
UBFD1-205ENST00000566136 TUBD1Q9UJT1 453 aa11.6□□□□□ -0.55
UBFD1-205ENST00000566136 L1RE1Q9UN81 338 aa11.6□□□□□ -0.55
UBFD1-205ENST00000566136 MTF2Q9Y483 593 aaPredicted RBP11.6□□□□□ -0.55
UBFD1-205ENST00000566136 ELP1O95163 1332 aa11.6□□□□□ -0.55
UBFD1-205ENST00000566136 MYO5AQ9Y4I1 1855 aaKnown RBP11.6□□□□□ -0.55
UBFD1-205ENST00000566136 AGRPO00253 132 aa11.6□□□□□ -0.55
UBFD1-205ENST00000566136 DLX3O60479 287 aa11.6□□□□□ -0.55
UBFD1-205ENST00000566136 IDH1O75874 414 aaKnown RBP11.6□□□□□ -0.55
UBFD1-205ENST00000566136 CYP17A1P05093 508 aa11.6□□□□□ -0.55
UBFD1-205ENST00000566136 ZFYP08048 801 aaPredicted RBP11.6□□□□□ -0.55
UBFD1-205ENST00000566136 PRELPP51888 382 aa11.6□□□□□ -0.55
UBFD1-205ENST00000566136 IFI35P80217 286 aaPredicted RBP11.6□□□□□ -0.55
UBFD1-205ENST00000566136 NRG1Q02297 640 aaPredicted RBP11.6□□□□□ -0.55
UBFD1-205ENST00000566136 ERV3-1Q14264 604 aa11.6□□□□□ -0.55
UBFD1-205ENST00000566136 PLCL1Q15111 1095 aa11.6□□□□□ -0.55
UBFD1-205ENST00000566136 IMMTQ16891 758 aaKnown RBP11.6□□□□□ -0.55
UBFD1-205ENST00000566136 LRRFIP1Q32MZ4 808 aaKnown RBP11.6□□□□□ -0.55
UBFD1-205ENST00000566136 IZUMO3Q5VZ72 239 aa11.6□□□□□ -0.55
UBFD1-205ENST00000566136 VGLL2Q8N8G2 317 aa11.6□□□□□ -0.55
UBFD1-205ENST00000566136 CNBD1Q8NA66 436 aa11.6□□□□□ -0.55
UBFD1-205ENST00000566136 FAM13CQ8NE31 585 aa11.6□□□□□ -0.55
UBFD1-205ENST00000566136 ADCY4Q8NFM4 1077 aa11.6□□□□□ -0.55
UBFD1-205ENST00000566136 NEK9Q8TD19 979 aa11.6□□□□□ -0.55
UBFD1-205ENST00000566136 C7orf43Q8WVR3 580 aa11.6□□□□□ -0.55
UBFD1-205ENST00000566136 PGBD1Q96JS3 809 aa11.6□□□□□ -0.55
UBFD1-205ENST00000566136 MAELQ96JY0 434 aaKnown RBP11.6□□□□□ -0.55
UBFD1-205ENST00000566136 NUP62CLQ9H1M0 184 aa11.6□□□□□ -0.55
UBFD1-205ENST00000566136 DEF6Q9H4E7 631 aa11.6□□□□□ -0.55
UBFD1-205ENST00000566136 LAMP5Q9UJQ1 280 aa11.6□□□□□ -0.55
UBFD1-205ENST00000566136 AKAP11Q9UKA4 1901 aa11.59□□□□□ -0.55
UBFD1-205ENST00000566136 BCORQ6W2J9 1755 aa11.59□□□□□ -0.55
UBFD1-205ENST00000566136 DLEC1Q9Y238 1755 aa11.59□□□□□ -0.55
UBFD1-205ENST00000566136 SBF1O95248 1867 aa11.59□□□□□ -0.55
UBFD1-205ENST00000566136 LINC00854A0A1B0GVQ3 168 aa11.59□□□□□ -0.55
UBFD1-205ENST00000566136 HARSP12081 509 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms