RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 CSRP1P21291 193 aaKnown RBP18.59■□□□□ 0.57
CLK3-217ENST00000566126 PXNP49023 591 aaPredicted RBP18.59■□□□□ 0.57
CLK3-217ENST00000566126 RAB33AQ14088 237 aa18.59■□□□□ 0.57
CLK3-217ENST00000566126 PRR16Q569H4 304 aa18.59■□□□□ 0.57
CLK3-217ENST00000566126 XKR3Q5GH77 459 aa18.59■□□□□ 0.57
CLK3-217ENST00000566126 PRSS36Q5K4E3 855 aa18.59■□□□□ 0.57
CLK3-217ENST00000566126 DAB2IPQ5VWQ8 1189 aa18.59■□□□□ 0.57
CLK3-217ENST00000566126 NFXL1Q6ZNB6 911 aa18.59■□□□□ 0.57
CLK3-217ENST00000566126 SRGAP1Q7Z6B7 1085 aa18.59■□□□□ 0.57
CLK3-217ENST00000566126 CEP57Q86XR8 500 aa18.59■□□□□ 0.57
CLK3-217ENST00000566126 PLEKHM2Q8IWE5 1019 aa18.59■□□□□ 0.57
CLK3-217ENST00000566126 HASPINQ8TF76 798 aa18.59■□□□□ 0.57
CLK3-217ENST00000566126 TCEAL4Q96EI5 215 aa18.59■□□□□ 0.57
CLK3-217ENST00000566126 ZC3H10Q96K80 434 aaKnown RBP18.59■□□□□ 0.57
CLK3-217ENST00000566126 ASB16Q96NS5 453 aa18.59■□□□□ 0.57
CLK3-217ENST00000566126 OSBPL3Q9H4L5 887 aa18.59■□□□□ 0.57
CLK3-217ENST00000566126 KLK13Q9UKR3 277 aa18.59■□□□□ 0.57
CLK3-217ENST00000566126 MSRB2Q9Y3D2 182 aa18.59■□□□□ 0.57
CLK3-217ENST00000566126 COL4A3BPQ9Y5P4 624 aa18.59■□□□□ 0.57
CLK3-217ENST00000566126 CELSR3Q9NYQ7 3312 aa18.59■□□□□ 0.57
CLK3-217ENST00000566126 CCDC69A6NI79 296 aa18.58■□□□□ 0.56
CLK3-217ENST00000566126 SH2B2O14492 632 aaPredicted RBP18.58■□□□□ 0.56
CLK3-217ENST00000566126 CHMP2AO43633 222 aa18.58■□□□□ 0.56
CLK3-217ENST00000566126 CALM1P0DP23 149 aa18.58■□□□□ 0.56
CLK3-217ENST00000566126 CALM2P0DP24 149 aa18.58■□□□□ 0.56
CLK3-217ENST00000566126 CALM3P0DP25 149 aa18.58■□□□□ 0.56
CLK3-217ENST00000566126 MLLT6P55198 1093 aaPredicted RBP18.58■□□□□ 0.56
CLK3-217ENST00000566126 HSP90AA2PQ14568 343 aaPredicted RBP18.58■□□□□ 0.56
CLK3-217ENST00000566126 FAM171A1Q5VUB5 890 aa18.58■□□□□ 0.56
CLK3-217ENST00000566126 PROSER1Q86XN7 944 aa18.58■□□□□ 0.56
CLK3-217ENST00000566126 FANCBQ8NB91 859 aa18.58■□□□□ 0.56
CLK3-217ENST00000566126 APOL6Q9BWW8 343 aa18.58■□□□□ 0.56
CLK3-217ENST00000566126 ANKFY1Q9P2R3 1169 aa18.58■□□□□ 0.56
CLK3-217ENST00000566126 GIT1Q9Y2X7 761 aa18.58■□□□□ 0.56
CLK3-217ENST00000566126 ASCC3Q8N3C0 2202 aaKnown RBP18.57■□□□□ 0.56
CLK3-217ENST00000566126 OR1D2P34982 312 aa18.57■□□□□ 0.56
CLK3-217ENST00000566126 SOX9P48436 509 aa18.57■□□□□ 0.56
CLK3-217ENST00000566126 TXNDC11Q6PKC3 985 aa18.57■□□□□ 0.56
CLK3-217ENST00000566126 ZSWIM3Q96MP5 696 aa18.57■□□□□ 0.56
CLK3-217ENST00000566126 MTA3Q9BTC8 594 aa18.57■□□□□ 0.56
CLK3-217ENST00000566126 UNC45AQ9H3U1 944 aa18.57■□□□□ 0.56
CLK3-217ENST00000566126 NUP205Q92621 2012 aa18.57■□□□□ 0.56
CLK3-217ENST00000566126 PCNX2A6NKB5 2137 aa18.56■□□□□ 0.56
CLK3-217ENST00000566126 LNP1A1A4G5 178 aa18.56■□□□□ 0.56
CLK3-217ENST00000566126 PRC1O43663 620 aa18.56■□□□□ 0.56
CLK3-217ENST00000566126 EXTL3O43909 919 aa18.56■□□□□ 0.56
CLK3-217ENST00000566126 KIF4AO95239 1232 aa18.56■□□□□ 0.56
CLK3-217ENST00000566126 SRGAP2CP0DJJ0 459 aa18.56■□□□□ 0.56
CLK3-217ENST00000566126 CCDC192P0DO97 292 aa18.56■□□□□ 0.56
CLK3-217ENST00000566126 SFNP31947 248 aa18.56■□□□□ 0.56
CLK3-217ENST00000566126 VIPR2P41587 438 aa18.56■□□□□ 0.56
CLK3-217ENST00000566126 CCR2P41597 374 aa18.56■□□□□ 0.56
CLK3-217ENST00000566126 JAK3P52333 1124 aa18.56■□□□□ 0.56
CLK3-217ENST00000566126 PLK5Q496M5 336 aa18.56■□□□□ 0.56
CLK3-217ENST00000566126 DGKKQ5KSL6 1271 aa18.56■□□□□ 0.56
CLK3-217ENST00000566126 RTL10Q7L3V2 364 aa18.56■□□□□ 0.56
CLK3-217ENST00000566126 ADAM32Q8TC27 787 aa18.56■□□□□ 0.56
CLK3-217ENST00000566126 DEPDC1BQ8WUY9 529 aa18.56■□□□□ 0.56
CLK3-217ENST00000566126 GLT8D2Q9H1C3 349 aa18.56■□□□□ 0.56
CLK3-217ENST00000566126 NXF3Q9H4D5 531 aaKnown RBP18.56■□□□□ 0.56
CLK3-217ENST00000566126 BARHL2Q9NY43 387 aa18.56■□□□□ 0.56
CLK3-217ENST00000566126 CCDC163A0A0D9SF12 145 aa18.55■□□□□ 0.56
CLK3-217ENST00000566126 WDR27A2RRH5 827 aa18.55■□□□□ 0.56
CLK3-217ENST00000566126 SLC38A8A6NNN8 435 aa18.55■□□□□ 0.56
CLK3-217ENST00000566126 ZNF263O14978 683 aa18.55■□□□□ 0.56
CLK3-217ENST00000566126 MSH4O15457 936 aa18.55■□□□□ 0.56
CLK3-217ENST00000566126 PTPN2P17706 415 aa18.55■□□□□ 0.56
CLK3-217ENST00000566126 AKAP5P24588 427 aa18.55■□□□□ 0.56
CLK3-217ENST00000566126 CIITAP33076 1130 aa18.55■□□□□ 0.56
CLK3-217ENST00000566126 GRIK3Q13003 919 aa18.55■□□□□ 0.56
CLK3-217ENST00000566126 COL28A1Q2UY09 1125 aa18.55■□□□□ 0.56
CLK3-217ENST00000566126 CASC1Q6TDU7 716 aa18.55■□□□□ 0.56
CLK3-217ENST00000566126 TMTC2Q8N394 836 aa18.55■□□□□ 0.56
CLK3-217ENST00000566126 SMARCD2Q92925 531 aa18.55■□□□□ 0.56
CLK3-217ENST00000566126 GJA10Q969M2 543 aa18.55■□□□□ 0.56
CLK3-217ENST00000566126 MSANTD3Q96H12 275 aa18.55■□□□□ 0.56
CLK3-217ENST00000566126 CPB2Q96IY4 423 aa18.55■□□□□ 0.56
CLK3-217ENST00000566126 CACNA1EQ15878 2313 aa18.54■□□□□ 0.56
CLK3-217ENST00000566126 TSPAN1O60635 241 aa18.54■□□□□ 0.56
CLK3-217ENST00000566126 AKAP3O75969 853 aa18.54■□□□□ 0.56
CLK3-217ENST00000566126 FUT2Q10981 343 aa18.54■□□□□ 0.56
CLK3-217ENST00000566126 CCINQ13939 588 aa18.54■□□□□ 0.56
CLK3-217ENST00000566126 PLA2G4FQ68DD2 849 aa18.54■□□□□ 0.56
CLK3-217ENST00000566126 PKN3Q6P5Z2 889 aa18.54■□□□□ 0.56
CLK3-217ENST00000566126 C1orf228Q6PIY5 440 aa18.54■□□□□ 0.56
CLK3-217ENST00000566126 ANO5Q75V66 913 aa18.54■□□□□ 0.56
CLK3-217ENST00000566126 MFSD6LQ8IWD5 586 aa18.54■□□□□ 0.56
CLK3-217ENST00000566126 DEFB124Q8NES8 71 aa18.54■□□□□ 0.56
CLK3-217ENST00000566126 PRPF31Q8WWY3 499 aaKnown RBP18.54■□□□□ 0.56
CLK3-217ENST00000566126 CSRNP2Q9H175 543 aa18.54■□□□□ 0.56
CLK3-217ENST00000566126 DUSP15Q9H1R2 295 aaPredicted RBP18.54■□□□□ 0.56
CLK3-217ENST00000566126 KLK14Q9P0G3 267 aa18.54■□□□□ 0.56
CLK3-217ENST00000566126 TENM4Q6N022 2769 aa18.53■□□□□ 0.56
CLK3-217ENST00000566126 ARHGEF37A1IGU5 675 aa18.53■□□□□ 0.56
CLK3-217ENST00000566126 DDX11L8A8MPP1 907 aa18.53■□□□□ 0.56
CLK3-217ENST00000566126 hCG_1984214I3L0E3 225 aa18.53■□□□□ 0.56
CLK3-217ENST00000566126 CDX4O14627 284 aaPredicted RBP18.53■□□□□ 0.56
CLK3-217ENST00000566126 EDIL3O43854 480 aa18.53■□□□□ 0.56
CLK3-217ENST00000566126 GAS7O60861 476 aa18.53■□□□□ 0.56
CLK3-217ENST00000566126 MICAL2O94851 1124 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms