RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 MEA1Q16626 185 aa10.64□□□□□ -0.71
SF3B3-207ENST00000566095 EXOC3L4Q17RC7 722 aa10.64□□□□□ -0.71
SF3B3-207ENST00000566095 ZNF618Q5T7W0 954 aa10.64□□□□□ -0.71
SF3B3-207ENST00000566095 KRT39Q6A163 491 aa10.64□□□□□ -0.71
SF3B3-207ENST00000566095 SLC39A4Q6P5W5 647 aa10.64□□□□□ -0.71
SF3B3-207ENST00000566095 FAM228AQ86W67 206 aa10.64□□□□□ -0.71
SF3B3-207ENST00000566095 THNSL1Q8IYQ7 743 aa10.64□□□□□ -0.71
SF3B3-207ENST00000566095 CCDC170Q8IYT3 715 aa10.64□□□□□ -0.71
SF3B3-207ENST00000566095 TXLNBQ8N3L3 684 aa10.64□□□□□ -0.71
SF3B3-207ENST00000566095 NEK11Q8NG66 645 aa10.64□□□□□ -0.71
SF3B3-207ENST00000566095 UBE2Q2Q8WVN8 375 aa10.64□□□□□ -0.71
SF3B3-207ENST00000566095 SEPT8Q92599 483 aa10.64□□□□□ -0.71
SF3B3-207ENST00000566095 SLC35C1Q96A29 364 aa10.64□□□□□ -0.71
SF3B3-207ENST00000566095 CGRRF1Q99675 332 aa10.64□□□□□ -0.71
SF3B3-207ENST00000566095 BAG1Q99933 345 aaPredicted RBP10.64□□□□□ -0.71
SF3B3-207ENST00000566095 HTATIP2Q9BUP3 242 aa10.64□□□□□ -0.71
SF3B3-207ENST00000566095 TRAIPQ9BWF2 469 aa10.64□□□□□ -0.71
SF3B3-207ENST00000566095 HIPK3Q9H422 1215 aa10.64□□□□□ -0.71
SF3B3-207ENST00000566095 TMEM8AQ9HCN3 771 aa10.64□□□□□ -0.71
SF3B3-207ENST00000566095 TMEM39AQ9NV64 488 aa10.64□□□□□ -0.71
SF3B3-207ENST00000566095 CPSF3Q9UKF6 684 aaKnown RBP10.64□□□□□ -0.71
SF3B3-207ENST00000566095 PLAGL2Q9UPG8 496 aa10.64□□□□□ -0.71
SF3B3-207ENST00000566095 ATP11BQ9Y2G3 1177 aa10.64□□□□□ -0.71
SF3B3-207ENST00000566095 SIK3Q9Y2K2 1263 aa10.64□□□□□ -0.71
SF3B3-207ENST00000566095 NOC2LQ9Y3T9 749 aaKnown RBP10.64□□□□□ -0.71
SF3B3-207ENST00000566095 ATP8B3O60423 1300 aa10.63□□□□□ -0.71
SF3B3-207ENST00000566095 TRIP12Q14669 1992 aaPredicted RBP10.63□□□□□ -0.71
SF3B3-207ENST00000566095 GOLGA8IPA6NC78 632 aa10.63□□□□□ -0.71
SF3B3-207ENST00000566095 GOLGA8JA6NMD2 632 aa10.63□□□□□ -0.71
SF3B3-207ENST00000566095 TULP1O00294 542 aaPredicted RBP10.63□□□□□ -0.71
SF3B3-207ENST00000566095 TEX33O43247 280 aa10.63□□□□□ -0.71
SF3B3-207ENST00000566095 HOXA2O43364 376 aa10.63□□□□□ -0.71
SF3B3-207ENST00000566095 ZC3H11AO75152 810 aaKnown RBP eCLIP10.63□□□□□ -0.71
SF3B3-207ENST00000566095 PHACTR2O75167 634 aa10.63□□□□□ -0.71
SF3B3-207ENST00000566095 GYPCP04921 128 aa10.63□□□□□ -0.71
SF3B3-207ENST00000566095 CCDC172P0C7W6 258 aa10.63□□□□□ -0.71
SF3B3-207ENST00000566095 STAG3L1P0CL83 205 aa10.63□□□□□ -0.71
SF3B3-207ENST00000566095 DLATP10515 647 aaKnown RBP10.63□□□□□ -0.71
SF3B3-207ENST00000566095 GHRP10912 638 aa10.63□□□□□ -0.71
SF3B3-207ENST00000566095 FMO5P49326 533 aa10.63□□□□□ -0.71
SF3B3-207ENST00000566095 ACOT2P49753 483 aa10.63□□□□□ -0.71
SF3B3-207ENST00000566095 ATN1P54259 1190 aaPredicted RBP10.63□□□□□ -0.71
SF3B3-207ENST00000566095 TLE2Q04725 743 aa10.63□□□□□ -0.71
SF3B3-207ENST00000566095 BIRC3Q13489 604 aa10.63□□□□□ -0.71
SF3B3-207ENST00000566095 DUOXA2Q1HG44 320 aa10.63□□□□□ -0.71
SF3B3-207ENST00000566095 TRIM60Q495X7 471 aa10.63□□□□□ -0.71
SF3B3-207ENST00000566095 WDR44Q5JSH3 913 aa10.63□□□□□ -0.71
SF3B3-207ENST00000566095 CYP26C1Q6V0L0 522 aa10.63□□□□□ -0.71
SF3B3-207ENST00000566095 CBWD2Q8IUF1 395 aa10.63□□□□□ -0.71
SF3B3-207ENST00000566095 TMEM139Q8IV31 216 aa10.63□□□□□ -0.71
SF3B3-207ENST00000566095 PARD3BQ8TEW8 1205 aa10.63□□□□□ -0.71
SF3B3-207ENST00000566095 DHX38Q92620 1227 aaKnown RBP10.63□□□□□ -0.71
SF3B3-207ENST00000566095 CCDC127Q96BQ5 260 aa10.63□□□□□ -0.71
SF3B3-207ENST00000566095 EEF2KMTQ96G04 330 aa10.63□□□□□ -0.71
SF3B3-207ENST00000566095 CPB2Q96IY4 423 aa10.63□□□□□ -0.71
SF3B3-207ENST00000566095 PAWRQ96IZ0 340 aaKnown RBP10.63□□□□□ -0.71
SF3B3-207ENST00000566095 RPS6KC1Q96S38 1066 aa10.63□□□□□ -0.71
SF3B3-207ENST00000566095 IFIH1Q9BYX4 1025 aaKnown RBP10.63□□□□□ -0.71
SF3B3-207ENST00000566095 ERVK-5Q9HDB9 667 aa10.63□□□□□ -0.71
SF3B3-207ENST00000566095 SLC38A7Q9NVC3 462 aa10.63□□□□□ -0.71
SF3B3-207ENST00000566095 C2CD2Q9Y426 696 aa10.63□□□□□ -0.71
SF3B3-207ENST00000566095 BZW2Q9Y6E2 419 aaKnown RBP10.63□□□□□ -0.71
SF3B3-207ENST00000566095 PCNTO95613 3336 aa10.62□□□□□ -0.71
SF3B3-207ENST00000566095 SSU72P8A0A1W2PR75 194 aa10.62□□□□□ -0.71
SF3B3-207ENST00000566095 CARNS1A5YM72 827 aa10.62□□□□□ -0.71
SF3B3-207ENST00000566095 TISP43B9A030 160 aa10.62□□□□□ -0.71
SF3B3-207ENST00000566095 ABLIM1O14639 778 aa10.62□□□□□ -0.71
SF3B3-207ENST00000566095 GFPT2O94808 682 aa10.62□□□□□ -0.71
SF3B3-207ENST00000566095 CLSTN1O94985 981 aa10.62□□□□□ -0.71
SF3B3-207ENST00000566095 EOMESO95936 686 aa10.62□□□□□ -0.71
SF3B3-207ENST00000566095 IQCF3P0C7M6 154 aa10.62□□□□□ -0.71
SF3B3-207ENST00000566095 ITGA4P13612 1032 aa10.62□□□□□ -0.71
SF3B3-207ENST00000566095 P4HA1P13674 534 aa10.62□□□□□ -0.71
SF3B3-207ENST00000566095 ATF7P17544 494 aaPredicted RBP10.62□□□□□ -0.71
SF3B3-207ENST00000566095 PAX3P23760 479 aa10.62□□□□□ -0.71
SF3B3-207ENST00000566095 HOXA11P31270 313 aaPredicted RBP10.62□□□□□ -0.71
SF3B3-207ENST00000566095 TRPC3Q13507 836 aa10.62□□□□□ -0.71
SF3B3-207ENST00000566095 LPIN1Q14693 890 aa10.62□□□□□ -0.71
SF3B3-207ENST00000566095 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.62□□□□□ -0.71
SF3B3-207ENST00000566095 ENOSF1Q7L5Y1 443 aa10.62□□□□□ -0.71
SF3B3-207ENST00000566095 CACNA2D4Q7Z3S7 1137 aa10.62□□□□□ -0.71
SF3B3-207ENST00000566095 RPUSD2Q8IZ73 545 aaKnown RBP10.62□□□□□ -0.71
SF3B3-207ENST00000566095 TMEM199Q8N511 208 aa10.62□□□□□ -0.71
SF3B3-207ENST00000566095 FBXL13Q8NEE6 735 aa10.62□□□□□ -0.71
SF3B3-207ENST00000566095 BEST2Q8NFU1 509 aa10.62□□□□□ -0.71
SF3B3-207ENST00000566095 PPP1R13LQ8WUF5 828 aa10.62□□□□□ -0.71
SF3B3-207ENST00000566095 TMEM40Q8WWA1 233 aa10.62□□□□□ -0.71
SF3B3-207ENST00000566095 TAF4BQ92750 862 aa10.62□□□□□ -0.71
SF3B3-207ENST00000566095 FAM212AQ96EL1 285 aa10.62□□□□□ -0.71
SF3B3-207ENST00000566095 FAXDC2Q96IV6 333 aa10.62□□□□□ -0.71
SF3B3-207ENST00000566095 ZBTB45Q96K62 511 aaPredicted RBP10.62□□□□□ -0.71
SF3B3-207ENST00000566095 MMRN2Q9H8L6 949 aa10.62□□□□□ -0.71
SF3B3-207ENST00000566095 ABHD10Q9NUJ1 306 aa10.62□□□□□ -0.71
SF3B3-207ENST00000566095 FAM105AQ9NUU6 356 aa10.62□□□□□ -0.71
SF3B3-207ENST00000566095 GCNT4Q9P109 453 aa10.62□□□□□ -0.71
SF3B3-207ENST00000566095 CEP72Q9P209 647 aa10.62□□□□□ -0.71
SF3B3-207ENST00000566095 PADI3Q9ULW8 664 aa10.62□□□□□ -0.71
SF3B3-207ENST00000566095 GIT1Q9Y2X7 761 aa10.62□□□□□ -0.71
SF3B3-207ENST00000566095 A0A0U1RQF3 1178 aa10.61□□□□□ -0.71
SF3B3-207ENST00000566095 ZNF623O75123 536 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms