RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 CMIPQ8IY22 773 aa3.33□□□□□ -1.88
CHD9-216ENST00000565803 PEX5LQ8IYB4 626 aa3.33□□□□□ -1.88
CHD9-216ENST00000565803 GJD3Q8N144 294 aa3.33□□□□□ -1.88
CHD9-216ENST00000565803 REXO1Q8N1G1 1221 aaKnown RBP3.33□□□□□ -1.88
CHD9-216ENST00000565803 OR2C3Q8N628 320 aa3.33□□□□□ -1.88
CHD9-216ENST00000565803 USHBP1Q8N6Y0 703 aa3.33□□□□□ -1.88
CHD9-216ENST00000565803 FNIP1Q8TF40 1166 aa3.33□□□□□ -1.88
CHD9-216ENST00000565803 AFG1LQ8WV93 481 aa3.33□□□□□ -1.88
CHD9-216ENST00000565803 NLRP3Q96P20 1036 aa3.33□□□□□ -1.88
CHD9-216ENST00000565803 SIKE1Q9BRV8 207 aa3.33□□□□□ -1.88
CHD9-216ENST00000565803 ANTXR1Q9H6X2 564 aa3.33□□□□□ -1.88
CHD9-216ENST00000565803 LIN28AQ9H9Z2 209 aaKnown RBP3.33□□□□□ -1.88
CHD9-216ENST00000565803 TCP11L1Q9NUJ3 509 aa3.33□□□□□ -1.88
CHD9-216ENST00000565803 MTMR10Q9NXD2 777 aa3.33□□□□□ -1.88
CHD9-216ENST00000565803 PRELID1Q9Y255 219 aa3.33□□□□□ -1.88
CHD9-216ENST00000565803 SPEF1Q9Y4P9 236 aa3.33□□□□□ -1.88
CHD9-216ENST00000565803 COL1A1P02452 1464 aaPredicted RBP3.33□□□□□ -1.88
CHD9-216ENST00000565803 A0A087WV62 115 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 LOC102724428A0A0B4J2F2 783 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 CTAGE15A4D2H0 777 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 LRRC72A6NJI9 287 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 GOLGA8AA7E2F4 631 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 GOLGA8BA8MQT2 603 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 PI4K2BG5E9Z4 385 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 TNFRSF10AO00220 468 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 PLD2O14939 933 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 CDKL5O76039 1030 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 EOMESO95936 686 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 CTAGE8P0CG41 777 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 ITGA6P23229 1130 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 GCH1P30793 250 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 TLX1P31314 330 aaPredicted RBP3.32□□□□□ -1.88
CHD9-216ENST00000565803 SIK1P57059 783 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 NLRP5P59047 1200 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 IRX1P78414 480 aaPredicted RBP3.32□□□□□ -1.88
CHD9-216ENST00000565803 MAPK7Q13164 816 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 CAMK2DQ13557 499 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 CUL4AQ13619 759 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 KCTD21Q4G0X4 260 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 TTBK2Q6IQ55 1244 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 DRICH1Q6PGQ1 229 aaPredicted RBP3.32□□□□□ -1.88
CHD9-216ENST00000565803 IGF2-ASQ6U949 168 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 NUP54Q7Z3B4 507 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 PPP1R42Q7Z4L9 355 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 FGD2Q7Z6J4 655 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 CTAGE6Q86UF2 777 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 SLC9A9Q8IVB4 645 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 CTAGE4Q8IX94 777 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 RNF168Q8IYW5 571 aaPredicted RBP3.32□□□□□ -1.88
CHD9-216ENST00000565803 ZNF619Q8N2I2 560 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 KDF1Q8NAX2 398 aaPredicted RBP3.32□□□□□ -1.88
CHD9-216ENST00000565803 IL17REQ8NFR9 667 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 SSH3Q8TE77 659 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 ATXN2LQ8WWM7 1075 aaKnown RBP3.32□□□□□ -1.88
CHD9-216ENST00000565803 PYM1Q9BRP8 204 aaKnown RBP3.32□□□□□ -1.88
CHD9-216ENST00000565803 APOL6Q9BWW8 343 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 MIR1-1HGQ9H1L0 117 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 AGO4Q9HCK5 861 aaKnown RBP3.32□□□□□ -1.88
CHD9-216ENST00000565803 TLR7Q9NYK1 1049 aaKnown RBP3.32□□□□□ -1.88
CHD9-216ENST00000565803 BAIAP2L1Q9UHR4 511 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 DACH1Q9UI36 760 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 TMEM5Q9Y2B1 443 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 ARAP2Q8WZ64 1704 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 KLHL33A6NCF5 533 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 SOAT2O75908 522 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 LETM1O95202 739 aaPredicted RBP3.32□□□□□ -1.88
CHD9-216ENST00000565803 FTCDO95954 541 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 ZSCAN22P10073 491 aaPredicted RBP3.32□□□□□ -1.88
CHD9-216ENST00000565803 LPOP22079 712 aaPredicted RBP3.32□□□□□ -1.88
CHD9-216ENST00000565803 MCM3P25205 808 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 ATP5DP30049 168 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 GRIK1P39086 918 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 MAGEA8P43361 318 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 LIG3P49916 1009 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 EPHA4P54764 986 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 BASP1P80723 227 aaKnown RBP3.32□□□□□ -1.88
CHD9-216ENST00000565803 MRPS5P82675 430 aaKnown RBP3.32□□□□□ -1.88
CHD9-216ENST00000565803 EXOSC9Q06265 439 aaKnown RBP3.32□□□□□ -1.88
CHD9-216ENST00000565803 C19orf57Q0VDD7 668 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 WSCD2Q2TBF2 565 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 CAVIN1Q6NZI2 390 aaKnown RBP3.32□□□□□ -1.88
CHD9-216ENST00000565803 TLDC1Q6P9B6 456 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 Q6ZVU0 165 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 ZNF598Q86UK7 904 aaKnown RBP3.32□□□□□ -1.88
CHD9-216ENST00000565803 GALNT12Q8IXK2 581 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 CBARPQ8N350 705 aaPredicted RBP3.32□□□□□ -1.88
CHD9-216ENST00000565803 GALNT6Q8NCL4 622 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 LRRN4CLQ8ND94 238 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 OR6J1Q8NGC5 347 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 GRIN3AQ8TCU5 1115 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 NANOS1Q8WY41 292 aaKnown RBP3.32□□□□□ -1.88
CHD9-216ENST00000565803 BICD1Q96G01 975 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 FAXDC2Q96IV6 333 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 IFT74Q96LB3 600 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 CNPPD1Q9BV87 410 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 OXCT2Q9BYC2 517 aaPredicted RBP3.32□□□□□ -1.88
CHD9-216ENST00000565803 ABCB6Q9NP58 842 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 HOMER3Q9NSC5 361 aa3.32□□□□□ -1.88
CHD9-216ENST00000565803 APOBEC2Q9Y235 224 aaKnown RBP3.32□□□□□ -1.88
CHD9-216ENST00000565803 RPTORQ8N122 1335 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms