RNA–Protein interactions for RNA: ENST00000565384.1

NSMCE1-209, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-209ENST00000565384 CXCL16Q9H2A7 254 aa12.8□□□□□ -0.36
NSMCE1-209ENST00000565384 TMEM60Q9H2L4 133 aa12.8□□□□□ -0.36
NSMCE1-209ENST00000565384 TUFT1Q9NNX1 390 aa12.8□□□□□ -0.36
NSMCE1-209ENST00000565384 ADAM12O43184 909 aa12.79□□□□□ -0.36
NSMCE1-209ENST00000565384 JAK2O60674 1132 aa12.79□□□□□ -0.36
NSMCE1-209ENST00000565384 EDN1P05305 212 aa12.79□□□□□ -0.36
NSMCE1-209ENST00000565384 PRKCBP05771 671 aa12.79□□□□□ -0.36
NSMCE1-209ENST00000565384 SP9P0CG40 484 aa12.79□□□□□ -0.36
NSMCE1-209ENST00000565384 GLULP15104 373 aa12.79□□□□□ -0.36
NSMCE1-209ENST00000565384 LIG1P18858 919 aa12.79□□□□□ -0.36
NSMCE1-209ENST00000565384 HOXA9P31269 272 aa12.79□□□□□ -0.36
NSMCE1-209ENST00000565384 MCM7P33993 719 aa12.79□□□□□ -0.36
NSMCE1-209ENST00000565384 STARD6P59095 220 aa12.79□□□□□ -0.36
NSMCE1-209ENST00000565384 ANAPC15P60006 121 aa12.79□□□□□ -0.36
NSMCE1-209ENST00000565384 ELAVL2Q12926 359 aaKnown RBP12.79□□□□□ -0.36
NSMCE1-209ENST00000565384 MAPK6Q16659 721 aa12.79□□□□□ -0.36
NSMCE1-209ENST00000565384 PDXDC1Q6P996 788 aa12.79□□□□□ -0.36
NSMCE1-209ENST00000565384 ZC3H14Q6PJT7 736 aaKnown RBP12.79□□□□□ -0.36
NSMCE1-209ENST00000565384 MTSS1LQ765P7 747 aa12.79□□□□□ -0.36
NSMCE1-209ENST00000565384 NOSTRINQ8IVI9 506 aa12.79□□□□□ -0.36
NSMCE1-209ENST00000565384 C1orf210Q8IVY1 113 aa12.79□□□□□ -0.36
NSMCE1-209ENST00000565384 SLC7A14Q8TBB6 771 aa12.79□□□□□ -0.36
NSMCE1-209ENST00000565384 FGF13Q92913 245 aa12.79□□□□□ -0.36
NSMCE1-209ENST00000565384 SHDQ96IW2 340 aa12.79□□□□□ -0.36
NSMCE1-209ENST00000565384 NACC1Q96RE7 527 aa12.79□□□□□ -0.36
NSMCE1-209ENST00000565384 ADPGKQ9BRR6 497 aa12.79□□□□□ -0.36
NSMCE1-209ENST00000565384 CCDC113Q9H0I3 377 aa12.79□□□□□ -0.36
NSMCE1-209ENST00000565384 POLIQ9UNA4 740 aa12.79□□□□□ -0.36
NSMCE1-209ENST00000565384 USP20Q9Y2K6 914 aa12.79□□□□□ -0.36
NSMCE1-209ENST00000565384 ACKR2O00590 384 aa12.78□□□□□ -0.36
NSMCE1-209ENST00000565384 XYLBO75191 536 aa12.78□□□□□ -0.36
NSMCE1-209ENST00000565384 LRRN2O75325 713 aa12.78□□□□□ -0.36
NSMCE1-209ENST00000565384 POU2F2P09086 479 aa12.78□□□□□ -0.36
NSMCE1-209ENST00000565384 NAMPTP43490 491 aa12.78□□□□□ -0.36
NSMCE1-209ENST00000565384 SNW1Q13573 536 aaKnown RBP12.78□□□□□ -0.36
NSMCE1-209ENST00000565384 AXDND1Q5T1B0 1012 aaPredicted RBP12.78□□□□□ -0.36
NSMCE1-209ENST00000565384 EEF1DP3Q658K8 133 aa12.78□□□□□ -0.36
NSMCE1-209ENST00000565384 PADI6Q6TGC4 694 aa12.78□□□□□ -0.36
NSMCE1-209ENST00000565384 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.78□□□□□ -0.36
NSMCE1-209ENST00000565384 DEPTORQ8TB45 409 aa12.78□□□□□ -0.36
NSMCE1-209ENST00000565384 ITFG1Q8TB96 612 aa12.78□□□□□ -0.36
NSMCE1-209ENST00000565384 POLR3CQ9BUI4 534 aaPredicted RBP12.78□□□□□ -0.36
NSMCE1-209ENST00000565384 MYH15Q9Y2K3 1946 aa12.78□□□□□ -0.36
NSMCE1-209ENST00000565384 RIF1Q5UIP0 2472 aaKnown RBP12.78□□□□□ -0.36
NSMCE1-209ENST00000565384 COL4A3Q01955 1670 aa12.77□□□□□ -0.36
NSMCE1-209ENST00000565384 KANSL1LA0AUZ9 987 aa12.77□□□□□ -0.37
NSMCE1-209ENST00000565384 ARHGEF35A5YM69 484 aa12.77□□□□□ -0.37
NSMCE1-209ENST00000565384 TMEM189-UBE2V1I3L0A0 370 aa12.77□□□□□ -0.37
NSMCE1-209ENST00000565384 CYP11B2P19099 503 aa12.77□□□□□ -0.37
NSMCE1-209ENST00000565384 FGFR3P22607 806 aa12.77□□□□□ -0.37
NSMCE1-209ENST00000565384 IGFBP6P24592 240 aaPredicted RBP12.77□□□□□ -0.37
NSMCE1-209ENST00000565384 OR1D2P34982 312 aa12.77□□□□□ -0.37
NSMCE1-209ENST00000565384 RAB33AQ14088 237 aa12.77□□□□□ -0.37
NSMCE1-209ENST00000565384 MLF2Q15773 248 aaPredicted RBP12.77□□□□□ -0.37
NSMCE1-209ENST00000565384 DCAF4L1Q3SXM0 396 aa12.77□□□□□ -0.37
NSMCE1-209ENST00000565384 GLRA4Q5JXX5 417 aa12.77□□□□□ -0.37
NSMCE1-209ENST00000565384 ERMNQ8TAM6 284 aa12.77□□□□□ -0.37
NSMCE1-209ENST00000565384 HINFPQ9BQA5 517 aa12.77□□□□□ -0.37
NSMCE1-209ENST00000565384 KIFC3Q9BVG8 833 aa12.77□□□□□ -0.37
NSMCE1-209ENST00000565384 HCFC1R1Q9NWW0 138 aa12.77□□□□□ -0.37
NSMCE1-209ENST00000565384 MTRRQ9UBK8 725 aa12.77□□□□□ -0.37
NSMCE1-209ENST00000565384 GDAQ9Y2T3 454 aa12.77□□□□□ -0.37
NSMCE1-209ENST00000565384 VWA8A3KMH1 1905 aa12.77□□□□□ -0.37
NSMCE1-209ENST00000565384 B3GAT3O94766 335 aa12.76□□□□□ -0.37
NSMCE1-209ENST00000565384 OR52Z1P0C646 297 aa12.76□□□□□ -0.37
NSMCE1-209ENST00000565384 RPA1P27694 616 aa12.76□□□□□ -0.37
NSMCE1-209ENST00000565384 RBM25P49756 843 aaKnown RBP12.76□□□□□ -0.37
NSMCE1-209ENST00000565384 CLCNKBP51801 687 aa12.76□□□□□ -0.37
NSMCE1-209ENST00000565384 PRKCQQ04759 706 aa12.76□□□□□ -0.37
NSMCE1-209ENST00000565384 ST3GAL1Q11201 340 aa12.76□□□□□ -0.37
NSMCE1-209ENST00000565384 PPP2R5AQ15172 486 aa12.76□□□□□ -0.37
NSMCE1-209ENST00000565384 UVSSAQ2YD98 709 aa12.76□□□□□ -0.37
NSMCE1-209ENST00000565384 PABPC1LQ4VXU2 614 aaKnown RBP12.76□□□□□ -0.37
NSMCE1-209ENST00000565384 SLC44A4Q53GD3 710 aa12.76□□□□□ -0.37
NSMCE1-209ENST00000565384 NPAS3Q8IXF0 933 aa12.76□□□□□ -0.37
NSMCE1-209ENST00000565384 KIAA2013Q8IYS2 634 aa12.76□□□□□ -0.37
NSMCE1-209ENST00000565384 MAML2Q8IZL2 1156 aaPredicted RBP12.76□□□□□ -0.37
NSMCE1-209ENST00000565384 RMDN1Q96DB5 314 aa12.76□□□□□ -0.37
NSMCE1-209ENST00000565384 PPP1R10Q96QC0 940 aaKnown RBP12.76□□□□□ -0.37
NSMCE1-209ENST00000565384 KXD1Q9BQD3 176 aa12.76□□□□□ -0.37
NSMCE1-209ENST00000565384 DDX23Q9BUQ8 820 aaKnown RBP12.76□□□□□ -0.37
NSMCE1-209ENST00000565384 DNMT3BQ9UBC3 853 aaKnown RBP12.76□□□□□ -0.37
NSMCE1-209ENST00000565384 KCNH3Q9ULD8 1083 aa12.76□□□□□ -0.37
NSMCE1-209ENST00000565384 CDY1Q9Y6F8 540 aa12.76□□□□□ -0.37
NSMCE1-209ENST00000565384 DOCK6Q96HP0 2047 aa12.76□□□□□ -0.37
NSMCE1-209ENST00000565384 TKTP29401 623 aaKnown RBP12.75□□□□□ -0.37
NSMCE1-209ENST00000565384 PFKPQ01813 784 aa12.75□□□□□ -0.37
NSMCE1-209ENST00000565384 GUCY1B3Q02153 619 aa12.75□□□□□ -0.37
NSMCE1-209ENST00000565384 UBXN2BQ14CS0 331 aa12.75□□□□□ -0.37
NSMCE1-209ENST00000565384 SAFBQ15424 915 aaKnown RBP eCLIP12.75□□□□□ -0.37
NSMCE1-209ENST00000565384 ZNF174Q15697 407 aa12.75□□□□□ -0.37
NSMCE1-209ENST00000565384 UPP1Q16831 310 aa12.75□□□□□ -0.37
NSMCE1-209ENST00000565384 NT5DC1Q5TFE4 455 aa12.75□□□□□ -0.37
NSMCE1-209ENST00000565384 ATF7IP2Q5U623 682 aa12.75□□□□□ -0.37
NSMCE1-209ENST00000565384 HAUS3Q68CZ6 603 aa12.75□□□□□ -0.37
NSMCE1-209ENST00000565384 CD300LGQ6UXG3 332 aa12.75□□□□□ -0.37
NSMCE1-209ENST00000565384 RSPO2Q6UXX9 243 aaPredicted RBP12.75□□□□□ -0.37
NSMCE1-209ENST00000565384 ING5Q8WYH8 240 aa12.75□□□□□ -0.37
NSMCE1-209ENST00000565384 DDX27Q96GQ7 796 aaKnown RBP12.75□□□□□ -0.37
NSMCE1-209ENST00000565384 IFT74Q96LB3 600 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms