RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 LMNAP02545 664 aaKnown RBP23.04■■□□□ 1.28
HERC2-204ENST00000563945 NEFLP07196 543 aa23.04■■□□□ 1.28
HERC2-204ENST00000563945 DCNP07585 359 aaKnown RBP23.04■■□□□ 1.28
HERC2-204ENST00000563945 CYP11B2P19099 503 aa23.04■■□□□ 1.28
HERC2-204ENST00000563945 NAMPTP43490 491 aa23.04■■□□□ 1.28
HERC2-204ENST00000563945 ID4P47928 161 aa23.04■■□□□ 1.28
HERC2-204ENST00000563945 NEK4P51957 841 aa23.04■■□□□ 1.28
HERC2-204ENST00000563945 ZC3H14Q6PJT7 736 aaKnown RBP23.04■■□□□ 1.28
HERC2-204ENST00000563945 MTSS1LQ765P7 747 aa23.04■■□□□ 1.28
HERC2-204ENST00000563945 SLC2A4RGQ9NR83 387 aa23.04■■□□□ 1.28
HERC2-204ENST00000563945 GDAQ9Y2T3 454 aa23.04■■□□□ 1.28
HERC2-204ENST00000563945 CCL16O15467 120 aa23.03■■□□□ 1.28
HERC2-204ENST00000563945 DCAF4L1Q3SXM0 396 aa23.03■■□□□ 1.28
HERC2-204ENST00000563945 POTEGQ6S5H5 508 aa23.03■■□□□ 1.28
HERC2-204ENST00000563945 ST13P5Q8NFI4 369 aaPredicted RBP23.03■■□□□ 1.28
HERC2-204ENST00000563945 CFAP54Q96N23 3096 aa23.03■■□□□ 1.28
HERC2-204ENST00000563945 DOCK8Q8NF50 2099 aa23.02■■□□□ 1.28
HERC2-204ENST00000563945 PTGESO14684 152 aa23.02■■□□□ 1.28
HERC2-204ENST00000563945 TRAPPC3O43617 180 aa23.02■■□□□ 1.28
HERC2-204ENST00000563945 OR52Z1P0C646 297 aa23.02■■□□□ 1.28
HERC2-204ENST00000563945 RPA1P27694 616 aa23.02■■□□□ 1.28
HERC2-204ENST00000563945 HOXA9P31269 272 aa23.02■■□□□ 1.28
HERC2-204ENST00000563945 OR1D2P34982 312 aa23.02■■□□□ 1.28
HERC2-204ENST00000563945 EFNA5P52803 228 aa23.02■■□□□ 1.28
HERC2-204ENST00000563945 NTHL1P78549 312 aa23.02■■□□□ 1.28
HERC2-204ENST00000563945 GUCY1B3Q02153 619 aa23.02■■□□□ 1.28
HERC2-204ENST00000563945 GNL2Q13823 731 aaKnown RBP23.02■■□□□ 1.28
HERC2-204ENST00000563945 ZNF174Q15697 407 aa23.02■■□□□ 1.28
HERC2-204ENST00000563945 UVSSAQ2YD98 709 aa23.02■■□□□ 1.28
HERC2-204ENST00000563945 HAUS3Q68CZ6 603 aa23.02■■□□□ 1.28
HERC2-204ENST00000563945 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.02■■□□□ 1.28
HERC2-204ENST00000563945 R4GN57 208 aa23.02■■□□□ 1.28
HERC2-204ENST00000563945 TTLL13PA6NNM8 815 aa23.01■■□□□ 1.27
HERC2-204ENST00000563945 B3GAT3O94766 335 aa23.01■■□□□ 1.27
HERC2-204ENST00000563945 GPC5P78333 572 aa23.01■■□□□ 1.27
HERC2-204ENST00000563945 ORC2Q13416 577 aaPredicted RBP23.01■■□□□ 1.27
HERC2-204ENST00000563945 AXDND1Q5T1B0 1012 aaPredicted RBP23.01■■□□□ 1.27
HERC2-204ENST00000563945 PARM1Q6UWI2 310 aa23.01■■□□□ 1.27
HERC2-204ENST00000563945 SLC7A14Q8TBB6 771 aa23.01■■□□□ 1.27
HERC2-204ENST00000563945 HINFPQ9BQA5 517 aa23.01■■□□□ 1.27
HERC2-204ENST00000563945 MUTP22033 750 aa23■■□□□ 1.27
HERC2-204ENST00000563945 RAB33AQ14088 237 aa23■■□□□ 1.27
HERC2-204ENST00000563945 ATF7IP2Q5U623 682 aa23■■□□□ 1.27
HERC2-204ENST00000563945 ERMP1Q7Z2K6 904 aa23■■□□□ 1.27
HERC2-204ENST00000563945 C1orf210Q8IVY1 113 aa23■■□□□ 1.27
HERC2-204ENST00000563945 BSNDQ8WZ55 320 aa23■■□□□ 1.27
HERC2-204ENST00000563945 KIFAP3Q92845 792 aa23■■□□□ 1.27
HERC2-204ENST00000563945 FGF13Q92913 245 aa23■■□□□ 1.27
HERC2-204ENST00000563945 FGF14Q92915 247 aa23■■□□□ 1.27
HERC2-204ENST00000563945 C8orf76Q96K31 380 aa23■■□□□ 1.27
HERC2-204ENST00000563945 USP20Q9Y2K6 914 aa23■■□□□ 1.27
HERC2-204ENST00000563945 K7ERI5 159 aa22.99■■□□□ 1.27
HERC2-204ENST00000563945 CCT6AP40227 531 aaKnown RBP22.99■■□□□ 1.27
HERC2-204ENST00000563945 YARSP54577 528 aaKnown RBP22.99■■□□□ 1.27
HERC2-204ENST00000563945 PFKPQ01813 784 aa22.99■■□□□ 1.27
HERC2-204ENST00000563945 EEF1DP3Q658K8 133 aa22.99■■□□□ 1.27
HERC2-204ENST00000563945 RTL10Q7L3V2 364 aa22.99■■□□□ 1.27
HERC2-204ENST00000563945 PJA1Q8NG27 643 aa22.99■■□□□ 1.27
HERC2-204ENST00000563945 UROC1Q96N76 676 aa22.99■■□□□ 1.27
HERC2-204ENST00000563945 RPP25Q9BUL9 199 aaKnown RBP22.99■■□□□ 1.27
HERC2-204ENST00000563945 GVINP1Q7Z2Y8 2422 aa22.99■■□□□ 1.27
HERC2-204ENST00000563945 ADAM12O43184 909 aa22.98■■□□□ 1.27
HERC2-204ENST00000563945 ELF1P32519 619 aa22.98■■□□□ 1.27
HERC2-204ENST00000563945 RBM25P49756 843 aaKnown RBP22.98■■□□□ 1.27
HERC2-204ENST00000563945 STARD6P59095 220 aa22.98■■□□□ 1.27
HERC2-204ENST00000563945 SNW1Q13573 536 aaKnown RBP22.98■■□□□ 1.27
HERC2-204ENST00000563945 PABPC1LQ4VXU2 614 aaKnown RBP22.98■■□□□ 1.27
HERC2-204ENST00000563945 ANKS3Q6ZW76 656 aa22.98■■□□□ 1.27
HERC2-204ENST00000563945 BCO2Q9BYV7 579 aa22.98■■□□□ 1.27
HERC2-204ENST00000563945 FOXQ1Q9C009 403 aa22.98■■□□□ 1.27
HERC2-204ENST00000563945 CCDC113Q9H0I3 377 aa22.98■■□□□ 1.27
HERC2-204ENST00000563945 TOPORSQ9NS56 1045 aaPredicted RBP22.98■■□□□ 1.27
HERC2-204ENST00000563945 MTRRQ9UBK8 725 aa22.98■■□□□ 1.27
HERC2-204ENST00000563945 KCNH3Q9ULD8 1083 aa22.98■■□□□ 1.27
HERC2-204ENST00000563945 STK24Q9Y6E0 443 aa22.98■■□□□ 1.27
HERC2-204ENST00000563945 EP300Q09472 2414 aaPredicted RBP22.98■■□□□ 1.27
HERC2-204ENST00000563945 TMEM189-UBE2V1I3L0A0 370 aa22.97■■□□□ 1.27
HERC2-204ENST00000563945 SP9P0CG40 484 aa22.97■■□□□ 1.27
HERC2-204ENST00000563945 FGFR3P22607 806 aa22.97■■□□□ 1.27
HERC2-204ENST00000563945 PRKCQQ04759 706 aa22.97■■□□□ 1.27
HERC2-204ENST00000563945 NAB2Q15742 525 aa22.97■■□□□ 1.27
HERC2-204ENST00000563945 SLC44A4Q53GD3 710 aa22.97■■□□□ 1.27
HERC2-204ENST00000563945 GLRA4Q5JXX5 417 aa22.97■■□□□ 1.27
HERC2-204ENST00000563945 ITFG1Q8TB96 612 aa22.97■■□□□ 1.27
HERC2-204ENST00000563945 KIFC3Q9BVG8 833 aa22.97■■□□□ 1.27
HERC2-204ENST00000563945 CCDC94Q9BW85 323 aaPredicted RBP22.97■■□□□ 1.27
HERC2-204ENST00000563945 CXCL16Q9H2A7 254 aa22.97■■□□□ 1.27
HERC2-204ENST00000563945 BHMT2Q9H2M3 363 aa22.97■■□□□ 1.27
HERC2-204ENST00000563945 FOXP1Q9H334 677 aaPredicted RBP22.97■■□□□ 1.27
HERC2-204ENST00000563945 NOL7Q9UMY1 257 aaKnown RBP22.97■■□□□ 1.27
HERC2-204ENST00000563945 MRPS23Q9Y3D9 190 aaKnown RBP22.97■■□□□ 1.27
HERC2-204ENST00000563945 CDY1Q9Y6F8 540 aa22.97■■□□□ 1.27
HERC2-204ENST00000563945 KANSL1LA0AUZ9 987 aa22.96■■□□□ 1.27
HERC2-204ENST00000563945 CCDC169A6NNP5 214 aa22.96■■□□□ 1.27
HERC2-204ENST00000563945 POU2F2P09086 479 aa22.96■■□□□ 1.27
HERC2-204ENST00000563945 CLCNKBP51801 687 aa22.96■■□□□ 1.27
HERC2-204ENST00000563945 UBXN2BQ14CS0 331 aa22.96■■□□□ 1.27
HERC2-204ENST00000563945 MLF2Q15773 248 aaPredicted RBP22.96■■□□□ 1.27
HERC2-204ENST00000563945 TTC38Q5R3I4 469 aa22.96■■□□□ 1.27
HERC2-204ENST00000563945 DDX27Q96GQ7 796 aaKnown RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms