RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 HP1BP3Q5SSJ5 553 aaPredicted RBP13.15□□□□□ -0.3
SCAMP2-204ENST00000563829 USP17L2Q6R6M4 530 aa13.15□□□□□ -0.3
SCAMP2-204ENST00000563829 MARK2Q7KZI7 788 aaKnown RBP13.15□□□□□ -0.3
SCAMP2-204ENST00000563829 DGKHQ86XP1 1220 aa13.15□□□□□ -0.3
SCAMP2-204ENST00000563829 SNRNP27Q8WVK2 155 aaKnown RBP13.15□□□□□ -0.3
SCAMP2-204ENST00000563829 SMC6Q96SB8 1091 aa13.15□□□□□ -0.3
SCAMP2-204ENST00000563829 ZNF212Q9UDV6 495 aa13.15□□□□□ -0.3
SCAMP2-204ENST00000563829 PLCH1Q4KWH8 1693 aa13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 HAUS5O94927 633 aa13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 CPA2P48052 419 aa13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 CTC1Q2NKJ3 1217 aa13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 SGO2Q562F6 1265 aa13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 FYB2Q5VWT5 728 aa13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 PHLDB3Q6NSJ2 640 aa13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 ZNF746Q6NUN9 644 aaPredicted RBP13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 OLIG1Q8TAK6 271 aa13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 SLC35C1Q96A29 364 aa13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 FNBP1Q96RU3 617 aa13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 PIGSQ96S52 555 aa13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 ANAPC5Q9UJX4 755 aa13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 POTEB3A0JP26 581 aa13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 POTECB2RU33 542 aa13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 OR6B1O95007 311 aa13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 FTLP02792 175 aaPredicted RBP13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 POTEBQ6S5H4 581 aa13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 RINLQ6ZS11 566 aa13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 ST13P4Q8IZP2 240 aaPredicted RBP13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 NAT14Q8WUY8 206 aa13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 PRR11Q96HE9 360 aaPredicted RBP13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 AGBL1Q96MI9 1066 aa13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 FAM161BQ96MY7 647 aa13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 IWS1Q96ST2 819 aa13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 TRABDQ9H4I3 376 aa13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 HEY2Q9UBP5 337 aa13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 JAG2Q9Y219 1238 aa13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 PCDH11YQ9BZA8 1340 aa13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 PALM3A6NDB9 673 aaPredicted RBP13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 MAGEB2O15479 319 aa13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 RNASEH1O60930 286 aaKnown RBP13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 ASLP04424 464 aa13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 HNRNPCP07910 306 aaKnown RBP eCLIP13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 FGFR1P11362 822 aa13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 SLC1A5Q15758 541 aa13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 PDK4Q16654 411 aa13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 Q4G0T1 1027 aa13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 SLC44A5Q8NCS7 719 aa13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 RFWD2Q8NHY2 731 aa13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 ZCRB1Q8TBF4 217 aaKnown RBP13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 SNF8Q96H20 258 aa13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 SAR1AQ9NR31 198 aa13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 FBXO6Q9NRD1 293 aaPredicted RBP13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 WHRNQ9P202 907 aa13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 BCS1LQ9Y276 419 aa13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.14□□□□□ -0.31
SCAMP2-204ENST00000563829 EXOC1LA0A1B0GW35 172 aa13.13□□□□□ -0.31
SCAMP2-204ENST00000563829 C2CD2LO14523 706 aa13.13□□□□□ -0.31
SCAMP2-204ENST00000563829 USP1O94782 785 aa13.13□□□□□ -0.31
SCAMP2-204ENST00000563829 TMCC1O94876 653 aa13.13□□□□□ -0.31
SCAMP2-204ENST00000563829 ITGA2BP08514 1039 aa13.13□□□□□ -0.31
SCAMP2-204ENST00000563829 VAV1P15498 845 aa13.13□□□□□ -0.31
SCAMP2-204ENST00000563829 ITIH2P19823 946 aa13.13□□□□□ -0.31
SCAMP2-204ENST00000563829 SLC20A1Q8WUM9 679 aa13.13□□□□□ -0.31
SCAMP2-204ENST00000563829 COA7Q96BR5 231 aa13.13□□□□□ -0.31
SCAMP2-204ENST00000563829 LENG1Q96BZ8 264 aaPredicted RBP13.13□□□□□ -0.31
SCAMP2-204ENST00000563829 TMEM47Q9BQJ4 181 aa13.13□□□□□ -0.31
SCAMP2-204ENST00000563829 IKZF4Q9H2S9 585 aa13.13□□□□□ -0.31
SCAMP2-204ENST00000563829 TAS2R1Q9NYW7 299 aa13.13□□□□□ -0.31
SCAMP2-204ENST00000563829 LGALS13Q9UHV8 139 aa13.13□□□□□ -0.31
SCAMP2-204ENST00000563829 UMODL1Q5DID0 1318 aa13.13□□□□□ -0.31
SCAMP2-204ENST00000563829 POTEFA5A3E0 1075 aa13.13□□□□□ -0.31
SCAMP2-204ENST00000563829 ERVV-2B6SEH9 535 aa13.13□□□□□ -0.31
SCAMP2-204ENST00000563829 ZWINTO95229 277 aa13.13□□□□□ -0.31
SCAMP2-204ENST00000563829 POTEIP0CG38 1075 aa13.13□□□□□ -0.31
SCAMP2-204ENST00000563829 POTEJP0CG39 1038 aa13.13□□□□□ -0.31
SCAMP2-204ENST00000563829 ESRRAP11474 423 aaPredicted RBP13.13□□□□□ -0.31
SCAMP2-204ENST00000563829 PGM1P36871 562 aa13.13□□□□□ -0.31
SCAMP2-204ENST00000563829 PIK3CAP42336 1068 aa13.13□□□□□ -0.31
SCAMP2-204ENST00000563829 TMED1Q13445 227 aa13.13□□□□□ -0.31
SCAMP2-204ENST00000563829 TTLL12Q14166 644 aaPredicted RBP13.13□□□□□ -0.31
SCAMP2-204ENST00000563829 KNOP1Q1ED39 458 aaKnown RBP13.13□□□□□ -0.31
SCAMP2-204ENST00000563829 DAB2IPQ5VWQ8 1189 aa13.13□□□□□ -0.31
SCAMP2-204ENST00000563829 POTEEQ6S8J3 1075 aa13.13□□□□□ -0.31
SCAMP2-204ENST00000563829 PPP4R3CPQ6ZMV5 832 aa13.13□□□□□ -0.31
SCAMP2-204ENST00000563829 SATL1Q86VE3 508 aa13.13□□□□□ -0.31
SCAMP2-204ENST00000563829 RHOT2Q8IXI1 618 aa13.13□□□□□ -0.31
SCAMP2-204ENST00000563829 OLFM3Q96PB7 478 aa13.13□□□□□ -0.31
SCAMP2-204ENST00000563829 MIS12Q9H081 205 aa13.13□□□□□ -0.31
SCAMP2-204ENST00000563829 ALG13Q9NP73 1137 aaKnown RBP13.13□□□□□ -0.31
SCAMP2-204ENST00000563829 CHST7Q9NS84 486 aa13.13□□□□□ -0.31
SCAMP2-204ENST00000563829 PCDHA12Q9UN75 941 aa13.13□□□□□ -0.31
SCAMP2-204ENST00000563829 KIF13AQ9H1H9 1805 aa13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 ATF2P15336 505 aa13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 CYP11B2P19099 503 aa13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 PKN2Q16513 984 aaKnown RBP13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 SH2D4BQ5SQS7 431 aa13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 RHBDF2Q6PJF5 856 aa13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 ZNF75CPQ92670 426 aaPredicted RBP13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 DDX17Q92841 729 aaKnown RBP13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 NSL1Q96IY1 281 aa13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 FAM118BQ9BPY3 351 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms