RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 NKD2Q969F2 451 aaPredicted RBP18.54■□□□□ 0.56
HDGFL3-203ENST00000563404 TBC1D17Q9HA65 648 aa18.54■□□□□ 0.56
HDGFL3-203ENST00000563404 VWA8A3KMH1 1905 aa18.54■□□□□ 0.56
HDGFL3-203ENST00000563404 SPTBN4Q9H254 2564 aa18.54■□□□□ 0.56
HDGFL3-203ENST00000563404 FAM186AA6NE01 2351 aa18.54■□□□□ 0.56
HDGFL3-203ENST00000563404 ARHGEF35A5YM69 484 aa18.53■□□□□ 0.56
HDGFL3-203ENST00000563404 STK25O00506 426 aa18.53■□□□□ 0.56
HDGFL3-203ENST00000563404 FSHRP23945 695 aa18.53■□□□□ 0.56
HDGFL3-203ENST00000563404 NAMPTP43490 491 aa18.53■□□□□ 0.56
HDGFL3-203ENST00000563404 NT5DC1Q5TFE4 455 aa18.53■□□□□ 0.56
HDGFL3-203ENST00000563404 CD300LGQ6UXG3 332 aa18.53■□□□□ 0.56
HDGFL3-203ENST00000563404 C4orf32Q8N8J7 132 aa18.53■□□□□ 0.56
HDGFL3-203ENST00000563404 GDAQ9Y2T3 454 aa18.53■□□□□ 0.56
HDGFL3-203ENST00000563404 DCHS1Q96JQ0 3298 aa18.52■□□□□ 0.56
HDGFL3-203ENST00000563404 C8AP07357 584 aa18.52■□□□□ 0.56
HDGFL3-203ENST00000563404 SAFBQ15424 915 aaKnown RBP eCLIP18.52■□□□□ 0.56
HDGFL3-203ENST00000563404 TMEM132AQ24JP5 1023 aa18.52■□□□□ 0.56
HDGFL3-203ENST00000563404 PARM1Q6UWI2 310 aa18.52■□□□□ 0.56
HDGFL3-203ENST00000563404 RSPO2Q6UXX9 243 aaPredicted RBP18.52■□□□□ 0.56
HDGFL3-203ENST00000563404 CCDC83Q8IWF9 413 aa18.52■□□□□ 0.56
HDGFL3-203ENST00000563404 ERMNQ8TAM6 284 aa18.52■□□□□ 0.56
HDGFL3-203ENST00000563404 DEPTORQ8TB45 409 aa18.52■□□□□ 0.56
HDGFL3-203ENST00000563404 FGF14Q92915 247 aa18.52■□□□□ 0.56
HDGFL3-203ENST00000563404 SLC2A4RGQ9NR83 387 aa18.52■□□□□ 0.56
HDGFL3-203ENST00000563404 DLGAP2Q9P1A6 1054 aa18.52■□□□□ 0.56
HDGFL3-203ENST00000563404 CCL16O15467 120 aa18.51■□□□□ 0.55
HDGFL3-203ENST00000563404 DCNP07585 359 aaKnown RBP18.51■□□□□ 0.55
HDGFL3-203ENST00000563404 HNRNPA1P09651 372 aaKnown RBP eCLIP18.51■□□□□ 0.55
HDGFL3-203ENST00000563404 NBR1Q14596 966 aa18.51■□□□□ 0.55
HDGFL3-203ENST00000563404 GLRA4Q5JXX5 417 aa18.51■□□□□ 0.55
HDGFL3-203ENST00000563404 TTC38Q5R3I4 469 aa18.51■□□□□ 0.55
HDGFL3-203ENST00000563404 PPM1LQ5SGD2 360 aa18.51■□□□□ 0.55
HDGFL3-203ENST00000563404 PHLDB3Q6NSJ2 640 aa18.51■□□□□ 0.55
HDGFL3-203ENST00000563404 ADSSL1Q8N142 457 aa18.51■□□□□ 0.55
HDGFL3-203ENST00000563404 ITFG1Q8TB96 612 aa18.51■□□□□ 0.55
HDGFL3-203ENST00000563404 C8orf76Q96K31 380 aa18.51■□□□□ 0.55
HDGFL3-203ENST00000563404 PPP1R10Q96QC0 940 aaKnown RBP18.51■□□□□ 0.55
HDGFL3-203ENST00000563404 ADPGKQ9BRR6 497 aa18.51■□□□□ 0.55
HDGFL3-203ENST00000563404 FOXP1Q9H334 677 aaPredicted RBP18.51■□□□□ 0.55
HDGFL3-203ENST00000563404 ARHGEF3Q9NR81 526 aa18.51■□□□□ 0.55
HDGFL3-203ENST00000563404 CDH7Q9ULB5 785 aa18.51■□□□□ 0.55
HDGFL3-203ENST00000563404 COL4A3Q01955 1670 aa18.5■□□□□ 0.55
HDGFL3-203ENST00000563404 GVINP1Q7Z2Y8 2422 aa18.5■□□□□ 0.55
HDGFL3-203ENST00000563404 GLULP15104 373 aa18.5■□□□□ 0.55
HDGFL3-203ENST00000563404 FGFR3P22607 806 aa18.5■□□□□ 0.55
HDGFL3-203ENST00000563404 HOXA9P31269 272 aa18.5■□□□□ 0.55
HDGFL3-203ENST00000563404 OR1D2P34982 312 aa18.5■□□□□ 0.55
HDGFL3-203ENST00000563404 CLCNKBP51801 687 aa18.5■□□□□ 0.55
HDGFL3-203ENST00000563404 ORC2Q13416 577 aaPredicted RBP18.5■□□□□ 0.55
HDGFL3-203ENST00000563404 RAB33AQ14088 237 aa18.5■□□□□ 0.55
HDGFL3-203ENST00000563404 DCAF4L1Q3SXM0 396 aa18.5■□□□□ 0.55
HDGFL3-203ENST00000563404 SPECC1Q5M775 1068 aa18.5■□□□□ 0.55
HDGFL3-203ENST00000563404 LIN9Q5TKA1 542 aa18.5■□□□□ 0.55
HDGFL3-203ENST00000563404 ATF7IP2Q5U623 682 aa18.5■□□□□ 0.55
HDGFL3-203ENST00000563404 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.5■□□□□ 0.55
HDGFL3-203ENST00000563404 C3orf58Q8NDZ4 430 aa18.5■□□□□ 0.55
HDGFL3-203ENST00000563404 BHMT2Q9H2M3 363 aa18.5■□□□□ 0.55
HDGFL3-203ENST00000563404 GOLGA2P5Q9HBQ8 144 aa18.5■□□□□ 0.55
HDGFL3-203ENST00000563404 HCFC1R1Q9NWW0 138 aa18.5■□□□□ 0.55
HDGFL3-203ENST00000563404 ZFP37Q9Y6Q3 630 aaPredicted RBP18.5■□□□□ 0.55
HDGFL3-203ENST00000563404 NOTCH4Q99466 2003 aa18.49■□□□□ 0.55
HDGFL3-203ENST00000563404 TMEM189-UBE2V1I3L0A0 370 aa18.49■□□□□ 0.55
HDGFL3-203ENST00000563404 MUTP22033 750 aa18.49■□□□□ 0.55
HDGFL3-203ENST00000563404 RFX1P22670 979 aa18.49■□□□□ 0.55
HDGFL3-203ENST00000563404 CCT6AP40227 531 aaKnown RBP18.49■□□□□ 0.55
HDGFL3-203ENST00000563404 RBM25P49756 843 aaKnown RBP18.49■□□□□ 0.55
HDGFL3-203ENST00000563404 FXR2P51116 673 aaKnown RBP eCLIP18.49■□□□□ 0.55
HDGFL3-203ENST00000563404 GPC5P78333 572 aa18.49■□□□□ 0.55
HDGFL3-203ENST00000563404 ELAVL2Q12926 359 aaKnown RBP18.49■□□□□ 0.55
HDGFL3-203ENST00000563404 PPP2R5AQ15172 486 aa18.49■□□□□ 0.55
HDGFL3-203ENST00000563404 AXDND1Q5T1B0 1012 aaPredicted RBP18.49■□□□□ 0.55
HDGFL3-203ENST00000563404 DCLRE1AQ6PJP8 1040 aa18.49■□□□□ 0.55
HDGFL3-203ENST00000563404 CEP120Q8N960 986 aa18.49■□□□□ 0.55
HDGFL3-203ENST00000563404 FBXO18Q8NFZ0 1043 aa18.49■□□□□ 0.55
HDGFL3-203ENST00000563404 SLC7A14Q8TBB6 771 aa18.49■□□□□ 0.55
HDGFL3-203ENST00000563404 FGF13Q92913 245 aa18.49■□□□□ 0.55
HDGFL3-203ENST00000563404 FOXQ1Q9C009 403 aa18.49■□□□□ 0.55
HDGFL3-203ENST00000563404 MTRRQ9UBK8 725 aa18.49■□□□□ 0.55
HDGFL3-203ENST00000563404 LIMCH1Q9UPQ0 1083 aa18.49■□□□□ 0.55
HDGFL3-203ENST00000563404 KIAA1024Q9UPX6 916 aa18.49■□□□□ 0.55
HDGFL3-203ENST00000563404 ZNF292O60281 2723 aa18.48■□□□□ 0.55
HDGFL3-203ENST00000563404 I3L4J1 428 aa18.48■□□□□ 0.55
HDGFL3-203ENST00000563404 LRRN2O75325 713 aa18.48■□□□□ 0.55
HDGFL3-203ENST00000563404 B3GAT3O94766 335 aa18.48■□□□□ 0.55
HDGFL3-203ENST00000563404 TKTP29401 623 aaKnown RBP18.48■□□□□ 0.55
HDGFL3-203ENST00000563404 EFNA5P52803 228 aa18.48■□□□□ 0.55
HDGFL3-203ENST00000563404 SOX4Q06945 474 aaPredicted RBP18.48■□□□□ 0.55
HDGFL3-203ENST00000563404 UPP1Q16831 310 aa18.48■□□□□ 0.55
HDGFL3-203ENST00000563404 HAUS3Q68CZ6 603 aa18.48■□□□□ 0.55
HDGFL3-203ENST00000563404 POTEHQ6S545 545 aa18.48■□□□□ 0.55
HDGFL3-203ENST00000563404 DAW1Q8N136 415 aa18.48■□□□□ 0.55
HDGFL3-203ENST00000563404 KIFAP3Q92845 792 aa18.48■□□□□ 0.55
HDGFL3-203ENST00000563404 DDX27Q96GQ7 796 aaKnown RBP18.48■□□□□ 0.55
HDGFL3-203ENST00000563404 IFT74Q96LB3 600 aa18.48■□□□□ 0.55
HDGFL3-203ENST00000563404 LLPHQ9BRT6 129 aaKnown RBP18.48■□□□□ 0.55
HDGFL3-203ENST00000563404 DNMT3BQ9UBC3 853 aaKnown RBP18.48■□□□□ 0.55
HDGFL3-203ENST00000563404 POLIQ9UNA4 740 aa18.48■□□□□ 0.55
HDGFL3-203ENST00000563404 SIT1Q9Y3P8 196 aa18.48■□□□□ 0.55
HDGFL3-203ENST00000563404 CDY1Q9Y6F8 540 aa18.48■□□□□ 0.55
HDGFL3-203ENST00000563404 R4GN57 208 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms