RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 KRT5P13647 590 aa20.57■□□□□ 0.88
SMPD3-203ENST00000563226 PIK3CAP42336 1068 aa20.57■□□□□ 0.88
SMPD3-203ENST00000563226 BIRC3Q13489 604 aa20.57■□□□□ 0.88
SMPD3-203ENST00000563226 CASP8Q14790 479 aa20.57■□□□□ 0.88
SMPD3-203ENST00000563226 TAPT1Q6NXT6 567 aa20.57■□□□□ 0.88
SMPD3-203ENST00000563226 RNPEPQ9H4A4 650 aa20.57■□□□□ 0.88
SMPD3-203ENST00000563226 ZC3H11AO75152 810 aaKnown RBP eCLIP20.57■□□□□ 0.88
SMPD3-203ENST00000563226 LDHAP00338 332 aaKnown RBP20.57■□□□□ 0.88
SMPD3-203ENST00000563226 MCM3P25205 808 aa20.57■□□□□ 0.88
SMPD3-203ENST00000563226 PDE6CP51160 858 aa20.57■□□□□ 0.88
SMPD3-203ENST00000563226 CCDC70Q6NSX1 233 aa20.57■□□□□ 0.88
SMPD3-203ENST00000563226 C8orf74Q6P047 294 aa20.57■□□□□ 0.88
SMPD3-203ENST00000563226 MAMDC4Q6UXC1 1216 aa20.57■□□□□ 0.88
SMPD3-203ENST00000563226 ZPBP2Q6X784 338 aa20.57■□□□□ 0.88
SMPD3-203ENST00000563226 RHPN2Q8IUC4 686 aa20.57■□□□□ 0.88
SMPD3-203ENST00000563226 GTF3C2Q8WUA4 911 aaPredicted RBP20.57■□□□□ 0.88
SMPD3-203ENST00000563226 TCP11Q8WWU5 503 aa20.57■□□□□ 0.88
SMPD3-203ENST00000563226 PBKQ96KB5 322 aa20.57■□□□□ 0.88
SMPD3-203ENST00000563226 GDAP1L1Q96MZ0 367 aa20.57■□□□□ 0.88
SMPD3-203ENST00000563226 CGRRF1Q99675 332 aa20.57■□□□□ 0.88
SMPD3-203ENST00000563226 SMARCAD1Q9H4L7 1026 aa20.57■□□□□ 0.88
SMPD3-203ENST00000563226 PLEKHA4Q9H4M7 779 aa20.57■□□□□ 0.88
SMPD3-203ENST00000563226 APOBEC3GQ9HC16 384 aaKnown RBP20.57■□□□□ 0.88
SMPD3-203ENST00000563226 LOC102724159A0A0B4J2E5 919 aa20.56■□□□□ 0.88
SMPD3-203ENST00000563226 CLDN3O15551 220 aa20.56■□□□□ 0.88
SMPD3-203ENST00000563226 PRKCBP05771 671 aa20.56■□□□□ 0.88
SMPD3-203ENST00000563226 CLCN3P51790 818 aa20.56■□□□□ 0.88
SMPD3-203ENST00000563226 CCNA1P78396 465 aa20.56■□□□□ 0.88
SMPD3-203ENST00000563226 CDR2Q01850 454 aa20.56■□□□□ 0.88
SMPD3-203ENST00000563226 SMC1AQ14683 1233 aaKnown RBP20.56■□□□□ 0.88
SMPD3-203ENST00000563226 PWP2Q15269 919 aaKnown RBP20.56■□□□□ 0.88
SMPD3-203ENST00000563226 MRPL4Q9BYD3 311 aaKnown RBP20.56■□□□□ 0.88
SMPD3-203ENST00000563226 AMFRQ9UKV5 643 aa20.56■□□□□ 0.88
SMPD3-203ENST00000563226 DDX3YO15523 660 aaKnown RBP20.55■□□□□ 0.88
SMPD3-203ENST00000563226 GTF2A2P52657 109 aa20.55■□□□□ 0.88
SMPD3-203ENST00000563226 EFNA5P52803 228 aa20.55■□□□□ 0.88
SMPD3-203ENST00000563226 GPC5P78333 572 aa20.55■□□□□ 0.88
SMPD3-203ENST00000563226 MXD4Q14582 209 aaPredicted RBP20.55■□□□□ 0.88
SMPD3-203ENST00000563226 KRT12Q99456 494 aa20.55■□□□□ 0.88
SMPD3-203ENST00000563226 ACO2Q99798 780 aaKnown RBP20.55■□□□□ 0.88
SMPD3-203ENST00000563226 STIM2Q9P246 746 aa20.55■□□□□ 0.88
SMPD3-203ENST00000563226 CTTNBP2NLQ9P2B4 639 aa20.55■□□□□ 0.88
SMPD3-203ENST00000563226 TMEM59LQ9UK28 342 aa20.55■□□□□ 0.88
SMPD3-203ENST00000563226 MGAMO43451 1857 aa20.55■□□□□ 0.88
SMPD3-203ENST00000563226 H3BQF6 201 aa20.55■□□□□ 0.88
SMPD3-203ENST00000563226 ABLIM1O14639 778 aa20.55■□□□□ 0.88
SMPD3-203ENST00000563226 GAS2O43903 313 aaKnown RBP20.55■□□□□ 0.88
SMPD3-203ENST00000563226 GRIN3BO60391 1043 aa20.55■□□□□ 0.88
SMPD3-203ENST00000563226 RHOT2Q8IXI1 618 aa20.55■□□□□ 0.88
SMPD3-203ENST00000563226 ACTRT1Q8TDG2 376 aa20.55■□□□□ 0.88
SMPD3-203ENST00000563226 NLRP4Q96MN2 994 aa20.55■□□□□ 0.88
SMPD3-203ENST00000563226 SLC45A1Q9Y2W3 748 aa20.55■□□□□ 0.88
SMPD3-203ENST00000563226 NOC2LQ9Y3T9 749 aaKnown RBP20.55■□□□□ 0.88
SMPD3-203ENST00000563226 UMODL1Q5DID0 1318 aa20.55■□□□□ 0.88
SMPD3-203ENST00000563226 HBP1O60381 514 aa20.54■□□□□ 0.88
SMPD3-203ENST00000563226 TOM1L1O75674 476 aa20.54■□□□□ 0.88
SMPD3-203ENST00000563226 GZMAP12544 262 aa20.54■□□□□ 0.88
SMPD3-203ENST00000563226 WDR44Q5JSH3 913 aa20.54■□□□□ 0.88
SMPD3-203ENST00000563226 DCAF12L1Q5VU92 463 aa20.54■□□□□ 0.88
SMPD3-203ENST00000563226 EFCAB12Q6NXP0 572 aa20.54■□□□□ 0.88
SMPD3-203ENST00000563226 ENOSF1Q7L5Y1 443 aa20.54■□□□□ 0.88
SMPD3-203ENST00000563226 BRSK2Q8IWQ3 736 aa20.54■□□□□ 0.88
SMPD3-203ENST00000563226 ZBTB8OSQ8IWT0 167 aa20.54■□□□□ 0.88
SMPD3-203ENST00000563226 TCHPQ9BT92 498 aa20.54■□□□□ 0.88
SMPD3-203ENST00000563226 KATNBL1Q9H079 304 aa20.54■□□□□ 0.88
SMPD3-203ENST00000563226 ZSCAN5CA6NGD5 496 aaPredicted RBP20.54■□□□□ 0.88
SMPD3-203ENST00000563226 UNCXA6NJT0 531 aa20.54■□□□□ 0.88
SMPD3-203ENST00000563226 OAS2P29728 719 aaKnown RBP20.54■□□□□ 0.88
SMPD3-203ENST00000563226 ADCYAP1R1P41586 468 aa20.54■□□□□ 0.88
SMPD3-203ENST00000563226 TNNT3P45378 269 aaPredicted RBP20.54■□□□□ 0.88
SMPD3-203ENST00000563226 SLC26A2P50443 739 aa20.54■□□□□ 0.88
SMPD3-203ENST00000563226 HADHBP55084 474 aaKnown RBP20.54■□□□□ 0.88
SMPD3-203ENST00000563226 IGBP1P78318 339 aa20.54■□□□□ 0.88
SMPD3-203ENST00000563226 MAPK6Q16659 721 aa20.54■□□□□ 0.88
SMPD3-203ENST00000563226 AP1M1Q9BXS5 423 aa20.54■□□□□ 0.88
SMPD3-203ENST00000563226 GBA2Q9HCG7 927 aaPredicted RBP20.54■□□□□ 0.88
SMPD3-203ENST00000563226 MORF4L1Q9UBU8 362 aa20.54■□□□□ 0.88
SMPD3-203ENST00000563226 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.53■□□□□ 0.88
SMPD3-203ENST00000563226 B4GALT5O43286 388 aa20.53■□□□□ 0.88
SMPD3-203ENST00000563226 C22orf31O95567 290 aa20.53■□□□□ 0.88
SMPD3-203ENST00000563226 LGALS2P05162 132 aa20.53■□□□□ 0.88
SMPD3-203ENST00000563226 GLI1P08151 1106 aa20.53■□□□□ 0.88
SMPD3-203ENST00000563226 MAP9Q49MG5 647 aa20.53■□□□□ 0.88
SMPD3-203ENST00000563226 ANKRD23Q86SG2 305 aa20.53■□□□□ 0.88
SMPD3-203ENST00000563226 KLHL7Q8IXQ5 586 aa20.53■□□□□ 0.88
SMPD3-203ENST00000563226 RASGEF1CQ8N431 466 aa20.53■□□□□ 0.88
SMPD3-203ENST00000563226 AENQ8WTP8 325 aaKnown RBP20.53■□□□□ 0.88
SMPD3-203ENST00000563226 SELENOOQ9BVL4 669 aa20.53■□□□□ 0.88
SMPD3-203ENST00000563226 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.53■□□□□ 0.88
SMPD3-203ENST00000563226 ERAP1Q9NZ08 941 aa20.53■□□□□ 0.88
SMPD3-203ENST00000563226 ANK1P16157 1881 aa20.52■□□□□ 0.88
SMPD3-203ENST00000563226 TMEM110-MUSTN1A8MSY1 372 aa20.52■□□□□ 0.88
SMPD3-203ENST00000563226 PGRMC1O00264 195 aaKnown RBP20.52■□□□□ 0.88
SMPD3-203ENST00000563226 ACO1P21399 889 aaKnown RBP20.52■□□□□ 0.88
SMPD3-203ENST00000563226 TCEAL1Q15170 157 aa20.52■□□□□ 0.88
SMPD3-203ENST00000563226 CDR2LQ86X02 465 aaPredicted RBP20.52■□□□□ 0.88
SMPD3-203ENST00000563226 PTPN18Q99952 460 aa20.52■□□□□ 0.88
SMPD3-203ENST00000563226 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.52■□□□□ 0.88
SMPD3-203ENST00000563226 MINDY3Q9H8M7 445 aa20.52■□□□□ 0.88
SMPD3-203ENST00000563226 ZCCHC17Q9NP64 241 aaKnown RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms