RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 CXorf49A8MYA2 514 aaPredicted RBP7.17□□□□□ -1.26
LINC00557-201ENST00000563184 RPLP2P05387 115 aaKnown RBP7.17□□□□□ -1.26
LINC00557-201ENST00000563184 HTR1BP28222 390 aa7.17□□□□□ -1.26
LINC00557-201ENST00000563184 RPS19P39019 145 aaKnown RBP7.17□□□□□ -1.26
LINC00557-201ENST00000563184 SNAPC2Q13487 334 aa7.17□□□□□ -1.26
LINC00557-201ENST00000563184 UBXN11Q5T124 520 aa7.17□□□□□ -1.26
LINC00557-201ENST00000563184 THEMIS2Q5TEJ8 643 aa7.17□□□□□ -1.26
LINC00557-201ENST00000563184 LIMS2Q7Z4I7 341 aa7.17□□□□□ -1.26
LINC00557-201ENST00000563184 FUKQ8N0W3 1084 aa7.17□□□□□ -1.26
LINC00557-201ENST00000563184 C3orf20Q8ND61 904 aa7.17□□□□□ -1.26
LINC00557-201ENST00000563184 ARL8AQ96BM9 186 aa7.17□□□□□ -1.26
LINC00557-201ENST00000563184 ZNF512Q96ME7 567 aaPredicted RBP7.17□□□□□ -1.26
LINC00557-201ENST00000563184 LSM14BQ9BX40 385 aaKnown RBP7.17□□□□□ -1.26
LINC00557-201ENST00000563184 SLC23A1Q9UHI7 598 aa7.17□□□□□ -1.26
LINC00557-201ENST00000563184 RUVBL1Q9Y265 456 aaKnown RBP7.17□□□□□ -1.26
LINC00557-201ENST00000563184 STXBP5LQ9Y2K9 1186 aa7.17□□□□□ -1.26
LINC00557-201ENST00000563184 PCDHA3Q9Y5H8 950 aa7.17□□□□□ -1.26
LINC00557-201ENST00000563184 SLC30A1Q9Y6M5 507 aa7.17□□□□□ -1.26
LINC00557-201ENST00000563184 ZNF536O15090 1300 aa7.17□□□□□ -1.26
LINC00557-201ENST00000563184 NT5C1B-RDH14C9J2C7 533 aa7.16□□□□□ -1.26
LINC00557-201ENST00000563184 FOXS1O43638 330 aa7.16□□□□□ -1.26
LINC00557-201ENST00000563184 RAD17O75943 681 aa7.16□□□□□ -1.26
LINC00557-201ENST00000563184 MALP21145 153 aa7.16□□□□□ -1.26
LINC00557-201ENST00000563184 AGFG1P52594 562 aaKnown RBP7.16□□□□□ -1.26
LINC00557-201ENST00000563184 NKX6-1P78426 367 aaPredicted RBP7.16□□□□□ -1.26
LINC00557-201ENST00000563184 FOXL1Q12952 345 aa7.16□□□□□ -1.26
LINC00557-201ENST00000563184 HLTFQ14527 1009 aaKnown RBP eCLIP7.16□□□□□ -1.26
LINC00557-201ENST00000563184 GRM7Q14831 915 aa7.16□□□□□ -1.26
LINC00557-201ENST00000563184 LLGL1Q15334 1064 aa7.16□□□□□ -1.26
LINC00557-201ENST00000563184 CSRP2Q16527 193 aa7.16□□□□□ -1.26
LINC00557-201ENST00000563184 FKBP15Q5T1M5 1219 aa7.16□□□□□ -1.26
LINC00557-201ENST00000563184 NPNTQ6UXI9 565 aa7.16□□□□□ -1.26
LINC00557-201ENST00000563184 COL23A1Q86Y22 540 aaPredicted RBP7.16□□□□□ -1.26
LINC00557-201ENST00000563184 PLXDC1Q8IUK5 500 aa7.16□□□□□ -1.26
LINC00557-201ENST00000563184 KIAA0319LQ8IZA0 1049 aa7.16□□□□□ -1.26
LINC00557-201ENST00000563184 GIMAP8Q8ND71 665 aaPredicted RBP7.16□□□□□ -1.26
LINC00557-201ENST00000563184 KLHDC4Q8TBB5 520 aa7.16□□□□□ -1.26
LINC00557-201ENST00000563184 TEPSINQ96N21 525 aa7.16□□□□□ -1.26
LINC00557-201ENST00000563184 MYOCQ99972 504 aa7.16□□□□□ -1.26
LINC00557-201ENST00000563184 B3GNT5Q9BYG0 378 aa7.16□□□□□ -1.26
LINC00557-201ENST00000563184 PLA2G3Q9NZ20 509 aa7.16□□□□□ -1.26
LINC00557-201ENST00000563184 MOCS1Q9NZB8 636 aa7.16□□□□□ -1.26
LINC00557-201ENST00000563184 ZFR2Q9UPR6 939 aaKnown RBP7.16□□□□□ -1.26
LINC00557-201ENST00000563184 POLHQ9Y253 713 aa7.16□□□□□ -1.26
LINC00557-201ENST00000563184 SH3BP1Q9Y3L3 701 aa7.16□□□□□ -1.26
LINC00557-201ENST00000563184 A0A0G2JLL6 359 aaPredicted RBP7.15□□□□□ -1.26
LINC00557-201ENST00000563184 CAND2O75155 1236 aa7.15□□□□□ -1.26
LINC00557-201ENST00000563184 RAP2AP10114 183 aa7.15□□□□□ -1.26
LINC00557-201ENST00000563184 HOXA5P20719 270 aa7.15□□□□□ -1.26
LINC00557-201ENST00000563184 IL12RB1P42701 662 aa7.15□□□□□ -1.26
LINC00557-201ENST00000563184 OTUD7BQ6GQQ9 843 aa7.15□□□□□ -1.26
LINC00557-201ENST00000563184 SWSAP1Q6NVH7 229 aa7.15□□□□□ -1.26
LINC00557-201ENST00000563184 SLC4A10Q6U841 1118 aa7.15□□□□□ -1.26
LINC00557-201ENST00000563184 GADL1Q6ZQY3 521 aa7.15□□□□□ -1.26
LINC00557-201ENST00000563184 SEM1Q6ZVN7 128 aa7.15□□□□□ -1.26
LINC00557-201ENST00000563184 GPRIN1Q7Z2K8 1008 aa7.15□□□□□ -1.26
LINC00557-201ENST00000563184 HEATR3Q7Z4Q2 680 aa7.15□□□□□ -1.26
LINC00557-201ENST00000563184 XYLT1Q86Y38 959 aa7.15□□□□□ -1.26
LINC00557-201ENST00000563184 CCDC146Q8IYE0 955 aa7.15□□□□□ -1.26
LINC00557-201ENST00000563184 RBM15Q96T37 977 aaKnown RBP eCLIP7.15□□□□□ -1.26
LINC00557-201ENST00000563184 ARNT2Q9HBZ2 717 aa7.15□□□□□ -1.26
LINC00557-201ENST00000563184 KRTAP9-7A8MTY7 169 aa7.14□□□□□ -1.27
LINC00557-201ENST00000563184 FAM227AF5H4B4 570 aa7.14□□□□□ -1.27
LINC00557-201ENST00000563184 TPP1O14773 563 aa7.14□□□□□ -1.27
LINC00557-201ENST00000563184 SBK3P0C264 359 aa7.14□□□□□ -1.27
LINC00557-201ENST00000563184 TYRP14679 529 aa7.14□□□□□ -1.27
LINC00557-201ENST00000563184 MSX2P35548 267 aaPredicted RBP7.14□□□□□ -1.27
LINC00557-201ENST00000563184 CTSWP56202 376 aa7.14□□□□□ -1.27
LINC00557-201ENST00000563184 MAP9Q49MG5 647 aa7.14□□□□□ -1.27
LINC00557-201ENST00000563184 ANO6Q4KMQ2 910 aa7.14□□□□□ -1.27
LINC00557-201ENST00000563184 DACT2Q5SW24 774 aa7.14□□□□□ -1.27
LINC00557-201ENST00000563184 CCSAPQ6IQ19 270 aaPredicted RBP7.14□□□□□ -1.27
LINC00557-201ENST00000563184 PNPLA7Q6ZV29 1317 aa7.14□□□□□ -1.27
LINC00557-201ENST00000563184 DOK3Q7L591 496 aa7.14□□□□□ -1.27
LINC00557-201ENST00000563184 CDK5RAP3Q96JB5 506 aa7.14□□□□□ -1.27
LINC00557-201ENST00000563184 MRI1Q9BV20 369 aa7.14□□□□□ -1.27
LINC00557-201ENST00000563184 CPEB1Q9BZB8 566 aaKnown RBP7.14□□□□□ -1.27
LINC00557-201ENST00000563184 DDX21Q9NR30 783 aaKnown RBP eCLIP7.14□□□□□ -1.27
LINC00557-201ENST00000563184 LMBRD1Q9NUN5 540 aa7.14□□□□□ -1.27
LINC00557-201ENST00000563184 SLC52A1Q9NWF4 448 aa7.14□□□□□ -1.27
LINC00557-201ENST00000563184 ABCF2Q9UG63 623 aa7.14□□□□□ -1.27
LINC00557-201ENST00000563184 A0A088AWK7 358 aa7.13□□□□□ -1.27
LINC00557-201ENST00000563184 CCDC194A0A1B0GVG4 234 aa7.13□□□□□ -1.27
LINC00557-201ENST00000563184 PATE3B3GLJ2 98 aa7.13□□□□□ -1.27
LINC00557-201ENST00000563184 B5MCH6 92 aa7.13□□□□□ -1.27
LINC00557-201ENST00000563184 F2RL2O00254 374 aa7.13□□□□□ -1.27
LINC00557-201ENST00000563184 PJA2O43164 708 aa7.13□□□□□ -1.27
LINC00557-201ENST00000563184 TEX33O43247 280 aa7.13□□□□□ -1.27
LINC00557-201ENST00000563184 ZBED1O96006 694 aa7.13□□□□□ -1.27
LINC00557-201ENST00000563184 HRGP04196 525 aa7.13□□□□□ -1.27
LINC00557-201ENST00000563184 TRIM27P14373 513 aa7.13□□□□□ -1.27
LINC00557-201ENST00000563184 RHCEP18577 417 aa7.13□□□□□ -1.27
LINC00557-201ENST00000563184 RAB1AP62820 205 aa7.13□□□□□ -1.27
LINC00557-201ENST00000563184 RHDQ02161 417 aa7.13□□□□□ -1.27
LINC00557-201ENST00000563184 PLS1Q14651 629 aa7.13□□□□□ -1.27
LINC00557-201ENST00000563184 APBB1IPQ7Z5R6 666 aaPredicted RBP7.13□□□□□ -1.27
LINC00557-201ENST00000563184 SRGAP1Q7Z6B7 1085 aa7.13□□□□□ -1.27
LINC00557-201ENST00000563184 CIR1Q86X95 450 aaPredicted RBP7.13□□□□□ -1.27
LINC00557-201ENST00000563184 FAM43AQ8N2R8 423 aa7.13□□□□□ -1.27
LINC00557-201ENST00000563184 FAM156AQ8NDB6 213 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms