RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 PTENP60484 403 aa10.14□□□□□ -0.79
LINC00838-201ENST00000562956 MBTD1Q05BQ5 628 aa10.14□□□□□ -0.79
LINC00838-201ENST00000562956 MAP2K5Q13163 448 aa10.14□□□□□ -0.79
LINC00838-201ENST00000562956 TFDP1Q14186 410 aa10.14□□□□□ -0.79
LINC00838-201ENST00000562956 SCARA3Q6AZY7 606 aa10.14□□□□□ -0.79
LINC00838-201ENST00000562956 IQSEC1Q6DN90 963 aa10.14□□□□□ -0.79
LINC00838-201ENST00000562956 NOP9Q86U38 636 aaKnown RBP10.14□□□□□ -0.79
LINC00838-201ENST00000562956 SLC47A2Q86VL8 602 aa10.14□□□□□ -0.79
LINC00838-201ENST00000562956 GPR161Q8N6U8 529 aaKnown RBP10.14□□□□□ -0.79
LINC00838-201ENST00000562956 LINC01465Q8N7H1 131 aa10.14□□□□□ -0.79
LINC00838-201ENST00000562956 NOA1Q8NC60 698 aaKnown RBP10.14□□□□□ -0.79
LINC00838-201ENST00000562956 OR5B17Q8NGF7 314 aa10.14□□□□□ -0.79
LINC00838-201ENST00000562956 EPS8L1Q8TE68 723 aa10.14□□□□□ -0.79
LINC00838-201ENST00000562956 OSBPL9Q96SU4 736 aa10.14□□□□□ -0.79
LINC00838-201ENST00000562956 INO80BQ9C086 356 aaPredicted RBP10.14□□□□□ -0.79
LINC00838-201ENST00000562956 FZD8Q9H461 694 aa10.14□□□□□ -0.79
LINC00838-201ENST00000562956 IFT122Q9HBG6 1241 aa10.14□□□□□ -0.79
LINC00838-201ENST00000562956 CSDE1O75534 798 aaKnown RBP10.14□□□□□ -0.79
LINC00838-201ENST00000562956 HLA-DRAP01903 254 aa10.14□□□□□ -0.79
LINC00838-201ENST00000562956 MCL1Q07820 350 aa10.14□□□□□ -0.79
LINC00838-201ENST00000562956 BIRC3Q13489 604 aa10.14□□□□□ -0.79
LINC00838-201ENST00000562956 TSHZ1Q6ZSZ6 1077 aa10.14□□□□□ -0.79
LINC00838-201ENST00000562956 CDR2LQ86X02 465 aaPredicted RBP10.14□□□□□ -0.79
LINC00838-201ENST00000562956 IFNL1Q8IU54 200 aa10.14□□□□□ -0.79
LINC00838-201ENST00000562956 CREG2Q8IUH2 290 aa10.14□□□□□ -0.79
LINC00838-201ENST00000562956 RPUSD2Q8IZ73 545 aaKnown RBP10.14□□□□□ -0.79
LINC00838-201ENST00000562956 CGRRF1Q99675 332 aa10.14□□□□□ -0.79
LINC00838-201ENST00000562956 GOLPH3Q9H4A6 298 aa10.14□□□□□ -0.79
LINC00838-201ENST00000562956 PTPRHQ9HD43 1115 aa10.14□□□□□ -0.79
LINC00838-201ENST00000562956 SLC5A4Q9NY91 659 aa10.14□□□□□ -0.79
LINC00838-201ENST00000562956 NOCTQ9UK39 431 aaKnown RBP10.14□□□□□ -0.79
LINC00838-201ENST00000562956 INTUQ9ULD6 942 aa10.14□□□□□ -0.79
LINC00838-201ENST00000562956 ATP8B3O60423 1300 aa10.14□□□□□ -0.79
LINC00838-201ENST00000562956 ACKR2O00590 384 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 VTNP04004 478 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 HOXD8P13378 290 aaPredicted RBP10.13□□□□□ -0.79
LINC00838-201ENST00000562956 PRLRP16471 622 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 CHRNB2P17787 502 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 ABCB4P21439 1286 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 PROZP22891 400 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 PIK3CAP42336 1068 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 NOP2P46087 812 aaKnown RBP10.13□□□□□ -0.79
LINC00838-201ENST00000562956 HNRNPH2P55795 449 aaKnown RBP10.13□□□□□ -0.79
LINC00838-201ENST00000562956 TNFAIP2Q03169 654 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 CCL14Q16627 93 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 MARCH8Q5T0T0 291 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 SPOPLQ6IQ16 392 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 MTHFD1LQ6UB35 978 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 C17orf99Q6UX52 265 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 BRSK2Q8IWQ3 736 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 PACSIN2Q9UNF0 486 aaPredicted RBP10.13□□□□□ -0.79
LINC00838-201ENST00000562956 A0A087WZ62 844 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 MAGEB2O15479 319 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 ASAP2O43150 1006 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 ZC3H11AO75152 810 aaKnown RBP eCLIP10.13□□□□□ -0.79
LINC00838-201ENST00000562956 SLC10A3P09131 477 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 GCNT1Q02742 428 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 DGKDQ16760 1214 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 MEI1Q5TIA1 1274 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 ATF7IP2Q5U623 682 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 EEF1DP3Q658K8 133 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 MSL3Q8N5Y2 521 aaKnown RBP10.13□□□□□ -0.79
LINC00838-201ENST00000562956 LRRC57Q8N9N7 239 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 LENG1Q96BZ8 264 aaPredicted RBP10.13□□□□□ -0.79
LINC00838-201ENST00000562956 PCDHB18PQ96TA0 734 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 FDXACB1Q9BRP7 624 aaPredicted RBP10.13□□□□□ -0.79
LINC00838-201ENST00000562956 PARD6BQ9BYG5 372 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 ANKZF1Q9H8Y5 726 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 ZCCHC17Q9NP64 241 aaKnown RBP10.13□□□□□ -0.79
LINC00838-201ENST00000562956 C1orf112Q9NSG2 853 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 AKT3Q9Y243 479 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 HYOU1Q9Y4L1 999 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 OGTO15294 1046 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 DYNC1LI2O43237 492 aaPredicted RBP10.13□□□□□ -0.79
LINC00838-201ENST00000562956 CALCAP01258 141 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 CYP11B1P15538 503 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 CYP2C19P33261 490 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 DNA2P51530 1060 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 CLCN6P51797 869 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 PPFIA1Q13136 1202 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 GRIK4Q16099 956 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 MPZL3Q6UWV2 235 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 TPCN2Q8NHX9 752 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 CAGE1Q8TC20 777 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 PPP1R13LQ8WUF5 828 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 NFKBIZQ9BYH8 718 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 THAP2Q9H0W7 228 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 APOBEC3GQ9HC16 384 aaKnown RBP10.13□□□□□ -0.79
LINC00838-201ENST00000562956 OSGEPQ9NPF4 335 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 SMARCAL1Q9NZC9 954 aa10.13□□□□□ -0.79
LINC00838-201ENST00000562956 CPSF3Q9UKF6 684 aaKnown RBP10.13□□□□□ -0.79
LINC00838-201ENST00000562956 A0A0A6YYK5 440 aaPredicted RBP10.12□□□□□ -0.79
LINC00838-201ENST00000562956 FAM155AB1AL88 458 aaPredicted RBP10.12□□□□□ -0.79
LINC00838-201ENST00000562956 MMEP08473 750 aa10.12□□□□□ -0.79
LINC00838-201ENST00000562956 TMEM253P0C7T8 217 aa10.12□□□□□ -0.79
LINC00838-201ENST00000562956 TCP1P17987 556 aaKnown RBP10.12□□□□□ -0.79
LINC00838-201ENST00000562956 TNNT3P45378 269 aaPredicted RBP10.12□□□□□ -0.79
LINC00838-201ENST00000562956 OSTNP61366 133 aa10.12□□□□□ -0.79
LINC00838-201ENST00000562956 TMEM132AQ24JP5 1023 aa10.12□□□□□ -0.79
LINC00838-201ENST00000562956 ZNF568Q3ZCX4 644 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms