RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 GUF1Q8N442 669 aaKnown RBP10.68□□□□□ -0.7
CLK3-208ENST00000562626 FIBCD1Q8N539 461 aa10.68□□□□□ -0.7
CLK3-208ENST00000562626 PLEKHO2Q8TD55 490 aa10.68□□□□□ -0.7
CLK3-208ENST00000562626 POMGNT1Q8WZA1 660 aa10.68□□□□□ -0.7
CLK3-208ENST00000562626 PGBD4Q96DM1 585 aa10.68□□□□□ -0.7
CLK3-208ENST00000562626 GZF1Q9H116 711 aaPredicted RBP10.68□□□□□ -0.7
CLK3-208ENST00000562626 TMEM206Q9H813 350 aa10.68□□□□□ -0.7
CLK3-208ENST00000562626 GOLGA2P5Q9HBQ8 144 aa10.68□□□□□ -0.7
CLK3-208ENST00000562626 HSPBP1Q9NZL4 362 aa10.68□□□□□ -0.7
CLK3-208ENST00000562626 DOCK6Q96HP0 2047 aa10.68□□□□□ -0.7
CLK3-208ENST00000562626 C2orf16Q68DN1 1984 aa10.67□□□□□ -0.7
CLK3-208ENST00000562626 PTPRDP23468 1912 aa10.67□□□□□ -0.7
CLK3-208ENST00000562626 TTC26A0AVF1 554 aa10.67□□□□□ -0.7
CLK3-208ENST00000562626 LACTBL1A8MY62 500 aa10.67□□□□□ -0.7
CLK3-208ENST00000562626 NT5C1B-RDH14C9J2C7 533 aa10.67□□□□□ -0.7
CLK3-208ENST00000562626 NFICP08651 508 aa10.67□□□□□ -0.7
CLK3-208ENST00000562626 GARTP22102 1010 aa10.67□□□□□ -0.7
CLK3-208ENST00000562626 CASP4P49662 377 aa10.67□□□□□ -0.7
CLK3-208ENST00000562626 CYP2J2P51589 502 aa10.67□□□□□ -0.7
CLK3-208ENST00000562626 GUCY2FP51841 1108 aa10.67□□□□□ -0.7
CLK3-208ENST00000562626 DSC1Q08554 894 aa10.67□□□□□ -0.7
CLK3-208ENST00000562626 ARMCX5Q6P1M9 558 aa10.67□□□□□ -0.7
CLK3-208ENST00000562626 GLB1LQ6UWU2 654 aa10.67□□□□□ -0.7
CLK3-208ENST00000562626 FAM43BQ6ZT52 329 aaPredicted RBP10.67□□□□□ -0.7
CLK3-208ENST00000562626 EFCAB13Q8IY85 973 aa10.67□□□□□ -0.7
CLK3-208ENST00000562626 ADSSL1Q8N142 457 aa10.67□□□□□ -0.7
CLK3-208ENST00000562626 CLP1Q92989 425 aaKnown RBP10.67□□□□□ -0.7
CLK3-208ENST00000562626 C18orf25Q96B23 403 aaPredicted RBP10.67□□□□□ -0.7
CLK3-208ENST00000562626 EEF2KMTQ96G04 330 aa10.67□□□□□ -0.7
CLK3-208ENST00000562626 FBXL18Q96ME1 805 aa10.67□□□□□ -0.7
CLK3-208ENST00000562626 FAM161BQ96MY7 647 aa10.67□□□□□ -0.7
CLK3-208ENST00000562626 ACAP3Q96P50 834 aa10.67□□□□□ -0.7
CLK3-208ENST00000562626 PPP1R10Q96QC0 940 aaKnown RBP10.67□□□□□ -0.7
CLK3-208ENST00000562626 FAM213AQ9BRX8 229 aa10.67□□□□□ -0.7
CLK3-208ENST00000562626 VN1R3Q9BXE9 311 aa10.67□□□□□ -0.7
CLK3-208ENST00000562626 ZNF576Q9H609 170 aa10.67□□□□□ -0.7
CLK3-208ENST00000562626 DMAC2Q9NW81 257 aa10.67□□□□□ -0.7
CLK3-208ENST00000562626 RMND1Q9NWS8 449 aa10.67□□□□□ -0.7
CLK3-208ENST00000562626 TUBGCP4Q9UGJ1 667 aa10.67□□□□□ -0.7
CLK3-208ENST00000562626 MSRAQ9UJ68 235 aa10.67□□□□□ -0.7
CLK3-208ENST00000562626 EXOC7Q9UPT5 735 aa10.67□□□□□ -0.7
CLK3-208ENST00000562626 GIT1Q9Y2X7 761 aa10.67□□□□□ -0.7
CLK3-208ENST00000562626 MYH10P35580 1976 aa10.66□□□□□ -0.7
CLK3-208ENST00000562626 SMIM28A0A1B0GU29 152 aa10.66□□□□□ -0.7
CLK3-208ENST00000562626 LPXNO60711 386 aa10.66□□□□□ -0.7
CLK3-208ENST00000562626 MBD3O95983 291 aa10.66□□□□□ -0.7
CLK3-208ENST00000562626 NR3C1P04150 777 aa10.66□□□□□ -0.7
CLK3-208ENST00000562626 ITGB1P05556 798 aa10.66□□□□□ -0.7
CLK3-208ENST00000562626 CLTAP09496 248 aa10.66□□□□□ -0.7
CLK3-208ENST00000562626 DNAJB1P25685 340 aa10.66□□□□□ -0.7
CLK3-208ENST00000562626 ABCD1P33897 745 aa10.66□□□□□ -0.7
CLK3-208ENST00000562626 SLC11A1P49279 550 aa10.66□□□□□ -0.7
CLK3-208ENST00000562626 ERVK-21P61565 698 aa10.66□□□□□ -0.7
CLK3-208ENST00000562626 GRIN2CQ14957 1233 aa10.66□□□□□ -0.7
CLK3-208ENST00000562626 NFKBIBQ15653 356 aa10.66□□□□□ -0.7
CLK3-208ENST00000562626 DPCR1Q3MIW9 517 aa10.66□□□□□ -0.7
CLK3-208ENST00000562626 EPC2Q52LR7 807 aa10.66□□□□□ -0.7
CLK3-208ENST00000562626 COBLL1Q53SF7 1204 aa10.66□□□□□ -0.7
CLK3-208ENST00000562626 ANKRD40Q6AI12 368 aa10.66□□□□□ -0.7
CLK3-208ENST00000562626 SLFN12LQ6IEE8 588 aa10.66□□□□□ -0.7
CLK3-208ENST00000562626 CAVIN1Q6NZI2 390 aaKnown RBP10.66□□□□□ -0.7
CLK3-208ENST00000562626 CD300LGQ6UXG3 332 aa10.66□□□□□ -0.7
CLK3-208ENST00000562626 STXBP4Q6ZWJ1 553 aa10.66□□□□□ -0.7
CLK3-208ENST00000562626 BRSK2Q8IWQ3 736 aa10.66□□□□□ -0.7
CLK3-208ENST00000562626 C12orf56Q8IXR9 622 aa10.66□□□□□ -0.7
CLK3-208ENST00000562626 COLGALT2Q8IYK4 626 aa10.66□□□□□ -0.7
CLK3-208ENST00000562626 ABI1Q8IZP0 508 aa10.66□□□□□ -0.7
CLK3-208ENST00000562626 LRRC43Q8N309 656 aa10.66□□□□□ -0.7
CLK3-208ENST00000562626 COLGALT1Q8NBJ5 622 aa10.66□□□□□ -0.7
CLK3-208ENST00000562626 RDH13Q8NBN7 331 aa10.66□□□□□ -0.7
CLK3-208ENST00000562626 GDPD5Q8WTR4 605 aa10.66□□□□□ -0.7
CLK3-208ENST00000562626 NOC3LQ8WTT2 800 aaKnown RBP10.66□□□□□ -0.7
CLK3-208ENST00000562626 ARNTL2Q8WYA1 636 aa10.66□□□□□ -0.7
CLK3-208ENST00000562626 CCDC47Q96A33 483 aaKnown RBP10.66□□□□□ -0.7
CLK3-208ENST00000562626 CCDC34Q96HJ3 373 aa10.66□□□□□ -0.7
CLK3-208ENST00000562626 DUSP9Q99956 384 aaKnown RBP10.66□□□□□ -0.7
CLK3-208ENST00000562626 CCDC94Q9BW85 323 aaPredicted RBP10.66□□□□□ -0.7
CLK3-208ENST00000562626 MARCH5Q9NX47 278 aa10.66□□□□□ -0.7
CLK3-208ENST00000562626 CNTN3Q9P232 1028 aa10.66□□□□□ -0.7
CLK3-208ENST00000562626 HOOK1Q9UJC3 728 aaKnown RBP10.66□□□□□ -0.7
CLK3-208ENST00000562626 CTNND2Q9UQB3 1225 aa10.66□□□□□ -0.7
CLK3-208ENST00000562626 CASTOR2A6NHX0 329 aa10.65□□□□□ -0.7
CLK3-208ENST00000562626 PDXKO00764 312 aa10.65□□□□□ -0.7
CLK3-208ENST00000562626 PPEF2O14830 753 aa10.65□□□□□ -0.7
CLK3-208ENST00000562626 HOXA2O43364 376 aa10.65□□□□□ -0.7
CLK3-208ENST00000562626 EXTL3O43909 919 aa10.65□□□□□ -0.7
CLK3-208ENST00000562626 ZC3H11AO75152 810 aaKnown RBP eCLIP10.65□□□□□ -0.7
CLK3-208ENST00000562626 GALTP07902 379 aa10.65□□□□□ -0.7
CLK3-208ENST00000562626 KCNE1P15382 129 aa10.65□□□□□ -0.7
CLK3-208ENST00000562626 CTNNB1P35222 781 aa10.65□□□□□ -0.7
CLK3-208ENST00000562626 BMPR1AP36894 532 aa10.65□□□□□ -0.7
CLK3-208ENST00000562626 BCAR1P56945 870 aa10.65□□□□□ -0.7
CLK3-208ENST00000562626 STX17P56962 302 aa10.65□□□□□ -0.7
CLK3-208ENST00000562626 GRIK3Q13003 919 aa10.65□□□□□ -0.7
CLK3-208ENST00000562626 CAMK1Q14012 370 aa10.65□□□□□ -0.7
CLK3-208ENST00000562626 ZBTB6Q15916 424 aa10.65□□□□□ -0.7
CLK3-208ENST00000562626 LMBRD2Q68DH5 695 aaPredicted RBP10.65□□□□□ -0.7
CLK3-208ENST00000562626 JADE1Q6IE81 842 aa10.65□□□□□ -0.7
CLK3-208ENST00000562626 CENPPQ6IPU0 288 aa10.65□□□□□ -0.7
CLK3-208ENST00000562626 KLHL10Q6JEL2 608 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms