RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 MZB1Q8WU39 189 aa6.77□□□□□ -1.33
UBR1-203ENST00000562173 PPM1EQ8WY54 764 aa6.77□□□□□ -1.33
UBR1-203ENST00000562173 TXNRD2Q9NNW7 524 aa6.77□□□□□ -1.33
UBR1-203ENST00000562173 CATSPERZQ9NTU4 200 aa6.77□□□□□ -1.33
UBR1-203ENST00000562173 FLRT1Q9NZU1 646 aa6.77□□□□□ -1.33
UBR1-203ENST00000562173 GJD2Q9UKL4 321 aa6.77□□□□□ -1.33
UBR1-203ENST00000562173 SIT1Q9Y3P8 196 aa6.77□□□□□ -1.33
UBR1-203ENST00000562173 ZHX2Q9Y6X8 837 aa6.77□□□□□ -1.33
UBR1-203ENST00000562173 DBX1A6NMT0 343 aa6.76□□□□□ -1.33
UBR1-203ENST00000562173 SRGAP2CP0DJJ0 459 aa6.76□□□□□ -1.33
UBR1-203ENST00000562173 PYGMP11217 842 aa6.76□□□□□ -1.33
UBR1-203ENST00000562173 SDSP20132 328 aa6.76□□□□□ -1.33
UBR1-203ENST00000562173 IGFBP6P24592 240 aaPredicted RBP6.76□□□□□ -1.33
UBR1-203ENST00000562173 PMLP29590 882 aa6.76□□□□□ -1.33
UBR1-203ENST00000562173 HIBADHP31937 336 aaKnown RBP6.76□□□□□ -1.33
UBR1-203ENST00000562173 PPATQ06203 517 aa6.76□□□□□ -1.33
UBR1-203ENST00000562173 ARHGAP44Q17R89 818 aa6.76□□□□□ -1.33
UBR1-203ENST00000562173 UBE2R2Q712K3 238 aaPredicted RBP6.76□□□□□ -1.33
UBR1-203ENST00000562173 NECAB2Q7Z6G3 386 aa6.76□□□□□ -1.33
UBR1-203ENST00000562173 KIF18BQ86Y91 864 aa6.76□□□□□ -1.33
UBR1-203ENST00000562173 CILP2Q8IUL8 1156 aa6.76□□□□□ -1.33
UBR1-203ENST00000562173 ZNF341Q9BYN7 854 aa6.76□□□□□ -1.33
UBR1-203ENST00000562173 C11orf49Q9H6J7 331 aa6.76□□□□□ -1.33
UBR1-203ENST00000562173 GCM1Q9NP62 436 aa6.76□□□□□ -1.33
UBR1-203ENST00000562173 CNNM1Q9NRU3 951 aa6.76□□□□□ -1.33
UBR1-203ENST00000562173 DTLQ9NZJ0 730 aa6.76□□□□□ -1.33
UBR1-203ENST00000562173 ZNF112Q9UJU3 913 aa6.76□□□□□ -1.33
UBR1-203ENST00000562173 CBLCQ9ULV8 474 aa6.76□□□□□ -1.33
UBR1-203ENST00000562173 HCFC2Q9Y5Z7 792 aa6.76□□□□□ -1.33
UBR1-203ENST00000562173 COL11A1P12107 1806 aaPredicted RBP6.76□□□□□ -1.33
UBR1-203ENST00000562173 MCM3APO60318 1980 aa6.75□□□□□ -1.33
UBR1-203ENST00000562173 A0A0G2JLL6 359 aaPredicted RBP6.75□□□□□ -1.33
UBR1-203ENST00000562173 A0A1W2PPC1 479 aa6.75□□□□□ -1.33
UBR1-203ENST00000562173 GRXCR1A8MXD5 290 aa6.75□□□□□ -1.33
UBR1-203ENST00000562173 NFIBO00712 420 aa6.75□□□□□ -1.33
UBR1-203ENST00000562173 NKRFO15226 690 aaKnown RBP eCLIP6.75□□□□□ -1.33
UBR1-203ENST00000562173 NBPF7P0C2Y1 421 aaPredicted RBP6.75□□□□□ -1.33
UBR1-203ENST00000562173 PDE6AP16499 860 aa6.75□□□□□ -1.33
UBR1-203ENST00000562173 ADORA1P30542 326 aa6.75□□□□□ -1.33
UBR1-203ENST00000562173 FKBP1AP62942 108 aaKnown RBP6.75□□□□□ -1.33
UBR1-203ENST00000562173 CACNB2Q08289 660 aaPredicted RBP6.75□□□□□ -1.33
UBR1-203ENST00000562173 ZNF460Q14592 562 aa6.75□□□□□ -1.33
UBR1-203ENST00000562173 PKN1Q16512 942 aa6.75□□□□□ -1.33
UBR1-203ENST00000562173 BEND3Q5T5X7 828 aa6.75□□□□□ -1.33
UBR1-203ENST00000562173 ABHD17CQ6PCB6 329 aa6.75□□□□□ -1.33
UBR1-203ENST00000562173 LDHAL6AQ6ZMR3 332 aa6.75□□□□□ -1.33
UBR1-203ENST00000562173 SYDE1Q6ZW31 735 aaPredicted RBP6.75□□□□□ -1.33
UBR1-203ENST00000562173 PRRT2Q7Z6L0 340 aaPredicted RBP6.75□□□□□ -1.33
UBR1-203ENST00000562173 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.75□□□□□ -1.33
UBR1-203ENST00000562173 B3GNT8Q7Z7M8 397 aa6.75□□□□□ -1.33
UBR1-203ENST00000562173 AHI1Q8N157 1196 aa6.75□□□□□ -1.33
UBR1-203ENST00000562173 ANKRD44Q8N8A2 993 aa6.75□□□□□ -1.33
UBR1-203ENST00000562173 VGLL2Q8N8G2 317 aa6.75□□□□□ -1.33
UBR1-203ENST00000562173 IGSF22Q8N9C0 903 aa6.75□□□□□ -1.33
UBR1-203ENST00000562173 CHST14Q8NCH0 376 aa6.75□□□□□ -1.33
UBR1-203ENST00000562173 TRPV1Q8NER1 839 aa6.75□□□□□ -1.33
UBR1-203ENST00000562173 ZNF384Q8TF68 577 aa6.75□□□□□ -1.33
UBR1-203ENST00000562173 DNAAF4Q8WXU2 420 aa6.75□□□□□ -1.33
UBR1-203ENST00000562173 SIGLEC10Q96LC7 697 aa6.75□□□□□ -1.33
UBR1-203ENST00000562173 YIPF4Q9BSR8 244 aa6.75□□□□□ -1.33
UBR1-203ENST00000562173 PORCNQ9H237 461 aa6.75□□□□□ -1.33
UBR1-203ENST00000562173 RXFP1Q9HBX9 757 aa6.75□□□□□ -1.33
UBR1-203ENST00000562173 CD320Q9NPF0 282 aa6.75□□□□□ -1.33
UBR1-203ENST00000562173 IFT57Q9NWB7 429 aa6.75□□□□□ -1.33
UBR1-203ENST00000562173 MAPRE3Q9UPY8 281 aa6.75□□□□□ -1.33
UBR1-203ENST00000562173 COQ6Q9Y2Z9 468 aa6.75□□□□□ -1.33
UBR1-203ENST00000562173 AFG3L2Q9Y4W6 797 aa6.75□□□□□ -1.33
UBR1-203ENST00000562173 FOCADQ5VW36 1801 aa6.74□□□□□ -1.33
UBR1-203ENST00000562173 RFX7Q2KHR2 1363 aa6.74□□□□□ -1.33
UBR1-203ENST00000562173 TCAF2A6NFQ2 919 aa6.74□□□□□ -1.33
UBR1-203ENST00000562173 TMEM253P0C7T8 217 aa6.74□□□□□ -1.33
UBR1-203ENST00000562173 JMJD7P0C870 316 aa6.74□□□□□ -1.33
UBR1-203ENST00000562173 COL6A1P12109 1028 aa6.74□□□□□ -1.33
UBR1-203ENST00000562173 RGS3P49796 1198 aa6.74□□□□□ -1.33
UBR1-203ENST00000562173 DNM2P50570 870 aa6.74□□□□□ -1.33
UBR1-203ENST00000562173 MECP2P51608 486 aaKnown RBP6.74□□□□□ -1.33
UBR1-203ENST00000562173 GYS2P54840 703 aa6.74□□□□□ -1.33
UBR1-203ENST00000562173 PRMT2P55345 433 aa6.74□□□□□ -1.33
UBR1-203ENST00000562173 LMOD3Q0VAK6 560 aa6.74□□□□□ -1.33
UBR1-203ENST00000562173 IFIT5Q13325 482 aaKnown RBP6.74□□□□□ -1.33
UBR1-203ENST00000562173 TUSC3Q13454 348 aa6.74□□□□□ -1.33
UBR1-203ENST00000562173 PICALMQ13492 652 aa6.74□□□□□ -1.33
UBR1-203ENST00000562173 TNFAIP1Q13829 316 aa6.74□□□□□ -1.33
UBR1-203ENST00000562173 ARHGAP36Q6ZRI8 547 aa6.74□□□□□ -1.33
UBR1-203ENST00000562173 OVCH1Q7RTY7 1134 aa6.74□□□□□ -1.33
UBR1-203ENST00000562173 IGDCC3Q8IVU1 814 aa6.74□□□□□ -1.33
UBR1-203ENST00000562173 TEKT1Q969V4 418 aa6.74□□□□□ -1.33
UBR1-203ENST00000562173 SMURF1Q9HCE7 757 aa6.74□□□□□ -1.33
UBR1-203ENST00000562173 CABP5Q9NP86 173 aa6.74□□□□□ -1.33
UBR1-203ENST00000562173 SAMD15Q9P1V8 674 aa6.74□□□□□ -1.33
UBR1-203ENST00000562173 PARP14Q460N5 1801 aa6.73□□□□□ -1.33
UBR1-203ENST00000562173 SCN5AQ14524 2016 aa6.73□□□□□ -1.33
UBR1-203ENST00000562173 GSG1L2A8MUP6 293 aa6.73□□□□□ -1.33
UBR1-203ENST00000562173 CBX4O00257 560 aa6.73□□□□□ -1.33
UBR1-203ENST00000562173 RFXAPO00287 272 aa6.73□□□□□ -1.33
UBR1-203ENST00000562173 ETV2O00321 342 aaPredicted RBP6.73□□□□□ -1.33
UBR1-203ENST00000562173 MAN2B1O00754 1011 aa6.73□□□□□ -1.33
UBR1-203ENST00000562173 CLASP2O75122 1294 aaKnown RBP6.73□□□□□ -1.33
UBR1-203ENST00000562173 GLRX3O76003 335 aaKnown RBP6.73□□□□□ -1.33
UBR1-203ENST00000562173 DDX58O95786 925 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms