RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 GPR135Q8IZ08 494 aa4.75□□□□□ -1.65
HERC1-215ENST00000561436 DNERQ8NFT8 737 aa4.75□□□□□ -1.65
HERC1-215ENST00000561436 GFM2Q969S9 779 aaKnown RBP4.75□□□□□ -1.65
HERC1-215ENST00000561436 RPL10LQ96L21 214 aaKnown RBP4.75□□□□□ -1.65
HERC1-215ENST00000561436 WDR92Q96MX6 357 aa4.75□□□□□ -1.65
HERC1-215ENST00000561436 SAMD11Q96NU1 681 aa4.75□□□□□ -1.65
HERC1-215ENST00000561436 GPR20Q99678 358 aa4.75□□□□□ -1.65
HERC1-215ENST00000561436 OSBPL6Q9BZF3 934 aa4.75□□□□□ -1.65
HERC1-215ENST00000561436 DEF6Q9H4E7 631 aa4.75□□□□□ -1.65
HERC1-215ENST00000561436 TMPRSS11EQ9UL52 423 aa4.75□□□□□ -1.65
HERC1-215ENST00000561436 ZFR2Q9UPR6 939 aaKnown RBP4.75□□□□□ -1.65
HERC1-215ENST00000561436 VWA7Q9Y334 891 aa4.75□□□□□ -1.65
HERC1-215ENST00000561436 RBM8AQ9Y5S9 174 aaKnown RBP4.75□□□□□ -1.65
HERC1-215ENST00000561436 SYCP2Q9BX26 1530 aa4.75□□□□□ -1.65
HERC1-215ENST00000561436 JCADQ9P266 1359 aa4.75□□□□□ -1.65
HERC1-215ENST00000561436 TMEM2Q9UHN6 1383 aa4.75□□□□□ -1.65
HERC1-215ENST00000561436 DEPDC5O75140 1603 aa4.75□□□□□ -1.65
HERC1-215ENST00000561436 NCOA2Q15596 1464 aa4.75□□□□□ -1.65
HERC1-215ENST00000561436 LRRC9Q6ZRR7 1453 aa4.75□□□□□ -1.65
HERC1-215ENST00000561436 SCAF11Q99590 1463 aaKnown RBP4.75□□□□□ -1.65
HERC1-215ENST00000561436 ARHGAP23Q9P227 1491 aa4.75□□□□□ -1.65
HERC1-215ENST00000561436 VWDEQ8N2E2 1590 aa4.74□□□□□ -1.65
HERC1-215ENST00000561436 C3P01024 1663 aa4.74□□□□□ -1.65
HERC1-215ENST00000561436 FGD6Q6ZV73 1430 aa4.74□□□□□ -1.65
HERC1-215ENST00000561436 C2orf78A6NCI8 922 aa4.74□□□□□ -1.65
HERC1-215ENST00000561436 FAM171A2A8MVW0 826 aa4.74□□□□□ -1.65
HERC1-215ENST00000561436 PATE3B3GLJ2 98 aa4.74□□□□□ -1.65
HERC1-215ENST00000561436 ZNF623O75123 536 aa4.74□□□□□ -1.65
HERC1-215ENST00000561436 C5AR1P21730 350 aa4.74□□□□□ -1.65
HERC1-215ENST00000561436 CCT2P78371 535 aaKnown RBP4.74□□□□□ -1.65
HERC1-215ENST00000561436 HGFACQ04756 655 aa4.74□□□□□ -1.65
HERC1-215ENST00000561436 MGAT5Q09328 741 aa4.74□□□□□ -1.65
HERC1-215ENST00000561436 ODF1Q14990 250 aa4.74□□□□□ -1.65
HERC1-215ENST00000561436 PPP4R3AQ6IN85 833 aa4.74□□□□□ -1.65
HERC1-215ENST00000561436 KLHDC10Q6PID8 442 aa4.74□□□□□ -1.65
HERC1-215ENST00000561436 MIGA2Q7L4E1 593 aa4.74□□□□□ -1.65
HERC1-215ENST00000561436 TPH2Q8IWU9 490 aa4.74□□□□□ -1.65
HERC1-215ENST00000561436 CCDC146Q8IYE0 955 aa4.74□□□□□ -1.65
HERC1-215ENST00000561436 PPM1NQ8N819 430 aa4.74□□□□□ -1.65
HERC1-215ENST00000561436 TTC8Q8TAM2 541 aa4.74□□□□□ -1.65
HERC1-215ENST00000561436 LRGUKQ96M69 825 aa4.74□□□□□ -1.65
HERC1-215ENST00000561436 MAP3K14Q99558 947 aa4.74□□□□□ -1.65
HERC1-215ENST00000561436 KLC2Q9H0B6 622 aa4.74□□□□□ -1.65
HERC1-215ENST00000561436 OR10A2Q9H208 303 aa4.74□□□□□ -1.65
HERC1-215ENST00000561436 PRDM12Q9H4Q4 367 aa4.74□□□□□ -1.65
HERC1-215ENST00000561436 GREM2Q9H772 168 aa4.74□□□□□ -1.65
HERC1-215ENST00000561436 DNM3Q9UQ16 869 aa4.74□□□□□ -1.65
HERC1-215ENST00000561436 DNMT1P26358 1616 aaKnown RBP4.74□□□□□ -1.65
HERC1-215ENST00000561436 PREX2Q70Z35 1606 aa4.74□□□□□ -1.65
HERC1-215ENST00000561436 MYO5CQ9NQX4 1742 aa4.74□□□□□ -1.65
HERC1-215ENST00000561436 ZNF142P52746 1687 aaPredicted RBP4.73□□□□□ -1.65
HERC1-215ENST00000561436 PHF2O75151 1096 aa4.73□□□□□ -1.65
HERC1-215ENST00000561436 DUSP8Q13202 625 aa4.73□□□□□ -1.65
HERC1-215ENST00000561436 ADRM1Q16186 407 aa4.73□□□□□ -1.65
HERC1-215ENST00000561436 ARHGAP29Q52LW3 1261 aa4.73□□□□□ -1.65
HERC1-215ENST00000561436 SPDYAQ5MJ70 313 aa4.73□□□□□ -1.65
HERC1-215ENST00000561436 LCE5AQ5TCM9 118 aa4.73□□□□□ -1.65
HERC1-215ENST00000561436 C14orf80Q86SX3 495 aa4.73□□□□□ -1.65
HERC1-215ENST00000561436 TSPEARQ8WU66 669 aa4.73□□□□□ -1.65
HERC1-215ENST00000561436 LPPQ93052 612 aa4.73□□□□□ -1.65
HERC1-215ENST00000561436 HDAC10Q969S8 669 aa4.73□□□□□ -1.65
HERC1-215ENST00000561436 SLC2A13Q96QE2 648 aa4.73□□□□□ -1.65
HERC1-215ENST00000561436 UIMC1Q96RL1 719 aa4.73□□□□□ -1.65
HERC1-215ENST00000561436 ADOQ96SZ5 270 aa4.73□□□□□ -1.65
HERC1-215ENST00000561436 SEC61A2Q9H9S3 476 aa4.73□□□□□ -1.65
HERC1-215ENST00000561436 C1orf112Q9NSG2 853 aa4.73□□□□□ -1.65
HERC1-215ENST00000561436 RBM12Q9NTZ6 932 aaKnown RBP4.73□□□□□ -1.65
HERC1-215ENST00000561436 HECAQ9UBI9 543 aaPredicted RBP4.73□□□□□ -1.65
HERC1-215ENST00000561436 PUF60Q9UHX1 559 aaKnown RBP4.73□□□□□ -1.65
HERC1-215ENST00000561436 EVLQ9UI08 416 aaPredicted RBP4.73□□□□□ -1.65
HERC1-215ENST00000561436 MSH6P52701 1360 aa4.73□□□□□ -1.65
HERC1-215ENST00000561436 TMEM94Q12767 1356 aa4.73□□□□□ -1.65
HERC1-215ENST00000561436 KANK1Q14678 1352 aa4.73□□□□□ -1.65
HERC1-215ENST00000561436 INO80Q9ULG1 1556 aaPredicted RBP4.73□□□□□ -1.65
HERC1-215ENST00000561436 KIDINS220Q9ULH0 1771 aa4.73□□□□□ -1.65
HERC1-215ENST00000561436 ABCC3O15438 1527 aa4.72□□□□□ -1.65
HERC1-215ENST00000561436 SLIT1O75093 1534 aa4.72□□□□□ -1.65
HERC1-215ENST00000561436 MYO3AQ8NEV4 1616 aa4.72□□□□□ -1.65
HERC1-215ENST00000561436 A0A0A6YYK5 440 aaPredicted RBP4.72□□□□□ -1.65
HERC1-215ENST00000561436 VSTM5A8MXK1 200 aa4.72□□□□□ -1.65
HERC1-215ENST00000561436 PRAMEF4O60810 478 aa4.72□□□□□ -1.65
HERC1-215ENST00000561436 SEC24DO94855 1032 aaPredicted RBP4.72□□□□□ -1.65
HERC1-215ENST00000561436 ZRANB2O95218 330 aaKnown RBP eCLIP4.72□□□□□ -1.65
HERC1-215ENST00000561436 MYL1P05976 194 aa4.72□□□□□ -1.65
HERC1-215ENST00000561436 MSX2P35548 267 aaPredicted RBP4.72□□□□□ -1.65
HERC1-215ENST00000561436 THEMIS2Q5TEJ8 643 aa4.72□□□□□ -1.65
HERC1-215ENST00000561436 PPP4R4Q6NUP7 873 aa4.72□□□□□ -1.65
HERC1-215ENST00000561436 SLC4A10Q6U841 1118 aa4.72□□□□□ -1.65
HERC1-215ENST00000561436 GAREM2Q75VX8 874 aa4.72□□□□□ -1.65
HERC1-215ENST00000561436 DGKHQ86XP1 1220 aa4.72□□□□□ -1.65
HERC1-215ENST00000561436 LYSMD2Q8IV50 215 aa4.72□□□□□ -1.65
HERC1-215ENST00000561436 SLC41A1Q8IVJ1 513 aa4.72□□□□□ -1.65
HERC1-215ENST00000561436 UNC5BQ8IZJ1 945 aa4.72□□□□□ -1.65
HERC1-215ENST00000561436 ZNF808Q8N4W9 903 aaPredicted RBP4.72□□□□□ -1.65
HERC1-215ENST00000561436 ANKRD53Q8N9V6 530 aa4.72□□□□□ -1.65
HERC1-215ENST00000561436 GLB1L3Q8NCI6 653 aaPredicted RBP4.72□□□□□ -1.65
HERC1-215ENST00000561436 SHCBP1Q8NEM2 672 aa4.72□□□□□ -1.65
HERC1-215ENST00000561436 SH3RF3Q8TEJ3 882 aaPredicted RBP4.72□□□□□ -1.65
HERC1-215ENST00000561436 GCDHQ92947 438 aaPredicted RBP4.72□□□□□ -1.65
HERC1-215ENST00000561436 GPHA2Q96T91 129 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms