RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 COASYQ13057 564 aa11.05□□□□□ -0.64
HERC1-212ENST00000561348 TUSC3Q13454 348 aa11.05□□□□□ -0.64
HERC1-212ENST00000561348 CUL4BQ13620 913 aa11.05□□□□□ -0.64
HERC1-212ENST00000561348 HSP90AA2PQ14568 343 aaPredicted RBP11.05□□□□□ -0.64
HERC1-212ENST00000561348 E2F4Q16254 413 aa11.05□□□□□ -0.64
HERC1-212ENST00000561348 ZNF720Q7Z2F6 126 aa11.05□□□□□ -0.64
HERC1-212ENST00000561348 DDX53Q86TM3 631 aaKnown RBP11.05□□□□□ -0.64
HERC1-212ENST00000561348 NELFCDQ8IXH7 590 aa11.05□□□□□ -0.64
HERC1-212ENST00000561348 GSTCDQ8NEC7 633 aa11.05□□□□□ -0.64
HERC1-212ENST00000561348 RSPH1Q8WYR4 309 aa11.05□□□□□ -0.64
HERC1-212ENST00000561348 POMGNT1Q8WZA1 660 aa11.05□□□□□ -0.64
HERC1-212ENST00000561348 ACCSQ96QU6 501 aa11.05□□□□□ -0.64
HERC1-212ENST00000561348 TRIM9Q9C026 710 aa11.05□□□□□ -0.64
HERC1-212ENST00000561348 PCIF1Q9H4Z3 704 aa11.05□□□□□ -0.64
HERC1-212ENST00000561348 RPF1Q9H9Y2 349 aaKnown RBP11.05□□□□□ -0.64
HERC1-212ENST00000561348 PTPRHQ9HD43 1115 aa11.05□□□□□ -0.64
HERC1-212ENST00000561348 NGRNQ9NPE2 291 aaKnown RBP11.05□□□□□ -0.64
HERC1-212ENST00000561348 SEL1LQ9UBV2 794 aa11.05□□□□□ -0.64
HERC1-212ENST00000561348 COG5Q9UP83 839 aa11.05□□□□□ -0.64
HERC1-212ENST00000561348 LZTS1Q9Y250 596 aa11.05□□□□□ -0.64
HERC1-212ENST00000561348 PCDHB13Q9Y5F0 798 aa11.05□□□□□ -0.64
HERC1-212ENST00000561348 EYSQ5T1H1 3165 aa11.05□□□□□ -0.64
HERC1-212ENST00000561348 SMIM28A0A1B0GU29 152 aa11.04□□□□□ -0.64
HERC1-212ENST00000561348 GOLGA8IPA6NC78 632 aa11.04□□□□□ -0.64
HERC1-212ENST00000561348 GOLGA8JA6NMD2 632 aa11.04□□□□□ -0.64
HERC1-212ENST00000561348 I3L4J1 428 aa11.04□□□□□ -0.64
HERC1-212ENST00000561348 B3GAT3O94766 335 aa11.04□□□□□ -0.64
HERC1-212ENST00000561348 URODP06132 367 aa11.04□□□□□ -0.64
HERC1-212ENST00000561348 KLRC2P26717 231 aa11.04□□□□□ -0.64
HERC1-212ENST00000561348 CLCNKBP51801 687 aa11.04□□□□□ -0.64
HERC1-212ENST00000561348 CASP5P51878 434 aa11.04□□□□□ -0.64
HERC1-212ENST00000561348 GTF2BQ00403 316 aa11.04□□□□□ -0.64
HERC1-212ENST00000561348 PPP2R3AQ06190 1150 aa11.04□□□□□ -0.64
HERC1-212ENST00000561348 DLX2Q07687 328 aaPredicted RBP11.04□□□□□ -0.64
HERC1-212ENST00000561348 ZBTB41Q5SVQ8 909 aa11.04□□□□□ -0.64
HERC1-212ENST00000561348 L1TD1Q5T7N2 865 aaKnown RBP11.04□□□□□ -0.64
HERC1-212ENST00000561348 PDE12Q6L8Q7 609 aaKnown RBP11.04□□□□□ -0.64
HERC1-212ENST00000561348 STXBP4Q6ZWJ1 553 aa11.04□□□□□ -0.64
HERC1-212ENST00000561348 TAS1R1Q7RTX1 841 aa11.04□□□□□ -0.64
HERC1-212ENST00000561348 GLIS3Q8NEA6 775 aa11.04□□□□□ -0.64
HERC1-212ENST00000561348 ATXN2LQ8WWM7 1075 aaKnown RBP11.04□□□□□ -0.64
HERC1-212ENST00000561348 C18orf25Q96B23 403 aaPredicted RBP11.04□□□□□ -0.64
HERC1-212ENST00000561348 SAAL1Q96ER3 474 aa11.04□□□□□ -0.64
HERC1-212ENST00000561348 KIF12Q96FN5 646 aa11.04□□□□□ -0.64
HERC1-212ENST00000561348 ASB2Q96Q27 587 aa11.04□□□□□ -0.64
HERC1-212ENST00000561348 PYM1Q9BRP8 204 aaKnown RBP11.04□□□□□ -0.64
HERC1-212ENST00000561348 FGFBP2Q9BYJ0 223 aa11.04□□□□□ -0.64
HERC1-212ENST00000561348 HAPLN2Q9GZV7 340 aa11.04□□□□□ -0.64
HERC1-212ENST00000561348 MRPL17Q9NRX2 175 aaKnown RBP11.04□□□□□ -0.64
HERC1-212ENST00000561348 KBTBD4Q9NVX7 518 aa11.04□□□□□ -0.64
HERC1-212ENST00000561348 MARCH5Q9NX47 278 aa11.04□□□□□ -0.64
HERC1-212ENST00000561348 AGO2Q9UKV8 859 aaKnown RBP11.04□□□□□ -0.64
HERC1-212ENST00000561348 BARX2Q9UMQ3 279 aaPredicted RBP11.04□□□□□ -0.64
HERC1-212ENST00000561348 TRIP11Q15643 1979 aa11.04□□□□□ -0.64
HERC1-212ENST00000561348 CARNS1A5YM72 827 aa11.03□□□□□ -0.64
HERC1-212ENST00000561348 C2orf71A6NGG8 1288 aa11.03□□□□□ -0.64
HERC1-212ENST00000561348 OGTO15294 1046 aa11.03□□□□□ -0.64
HERC1-212ENST00000561348 KIF4AO95239 1232 aa11.03□□□□□ -0.64
HERC1-212ENST00000561348 CLTAP09496 248 aa11.03□□□□□ -0.64
HERC1-212ENST00000561348 SLFN14P0C7P3 912 aa11.03□□□□□ -0.64
HERC1-212ENST00000561348 SRGAP2BP0DMP2 458 aa11.03□□□□□ -0.64
HERC1-212ENST00000561348 PROZP22891 400 aa11.03□□□□□ -0.64
HERC1-212ENST00000561348 ABCD1P33897 745 aa11.03□□□□□ -0.64
HERC1-212ENST00000561348 GLUD2P49448 558 aa11.03□□□□□ -0.64
HERC1-212ENST00000561348 MCL1Q07820 350 aa11.03□□□□□ -0.64
HERC1-212ENST00000561348 DSC1Q08554 894 aa11.03□□□□□ -0.64
HERC1-212ENST00000561348 TJAP1Q5JTD0 557 aa11.03□□□□□ -0.64
HERC1-212ENST00000561348 FAM26FQ5R3K3 315 aa11.03□□□□□ -0.64
HERC1-212ENST00000561348 FAM171A1Q5VUB5 890 aa11.03□□□□□ -0.64
HERC1-212ENST00000561348 SLFN12LQ6IEE8 588 aa11.03□□□□□ -0.64
HERC1-212ENST00000561348 PTCRAQ6ISU1 281 aaPredicted RBP11.03□□□□□ -0.64
HERC1-212ENST00000561348 FUT10Q6P4F1 479 aa11.03□□□□□ -0.64
HERC1-212ENST00000561348 MAP4K3Q8IVH8 894 aa11.03□□□□□ -0.64
HERC1-212ENST00000561348 TMEM130Q8N3G9 435 aa11.03□□□□□ -0.64
HERC1-212ENST00000561348 MRPL43Q8N983 215 aaKnown RBP11.03□□□□□ -0.64
HERC1-212ENST00000561348 RIN2Q8WYP3 895 aaPredicted RBP11.03□□□□□ -0.64
HERC1-212ENST00000561348 PABPC5Q96DU9 382 aaKnown RBP11.03□□□□□ -0.64
HERC1-212ENST00000561348 PAGE5Q96GU1 130 aa11.03□□□□□ -0.64
HERC1-212ENST00000561348 SNX27Q96L92 541 aa11.03□□□□□ -0.64
HERC1-212ENST00000561348 NECAB3Q96P71 396 aaPredicted RBP11.03□□□□□ -0.64
HERC1-212ENST00000561348 FIZ1Q96SL8 496 aa11.03□□□□□ -0.64
HERC1-212ENST00000561348 C7orf25Q9BPX7 421 aa11.03□□□□□ -0.64
HERC1-212ENST00000561348 FAM213AQ9BRX8 229 aa11.03□□□□□ -0.64
HERC1-212ENST00000561348 VN1R3Q9BXE9 311 aa11.03□□□□□ -0.64
HERC1-212ENST00000561348 GPR62Q9BZJ7 368 aa11.03□□□□□ -0.64
HERC1-212ENST00000561348 ZBP1Q9H171 429 aa11.03□□□□□ -0.64
HERC1-212ENST00000561348 GOLPH3LQ9H4A5 285 aa11.03□□□□□ -0.64
HERC1-212ENST00000561348 MAGEF1Q9HAY2 307 aa11.03□□□□□ -0.64
HERC1-212ENST00000561348 SLC39A2Q9NP94 309 aa11.03□□□□□ -0.64
HERC1-212ENST00000561348 EXOC1Q9NV70 894 aa11.03□□□□□ -0.64
HERC1-212ENST00000561348 ADAM28Q9UKQ2 775 aa11.03□□□□□ -0.64
HERC1-212ENST00000561348 NUB1Q9Y5A7 615 aa11.03□□□□□ -0.64
HERC1-212ENST00000561348 ATG2AQ2TAZ0 1938 aa11.03□□□□□ -0.64
HERC1-212ENST00000561348 PRUNE2Q8WUY3 3088 aa11.03□□□□□ -0.64
HERC1-212ENST00000561348 CITO14578 2027 aa11.02□□□□□ -0.64
HERC1-212ENST00000561348 LACTBL1A8MY62 500 aa11.02□□□□□ -0.65
HERC1-212ENST00000561348 DLL1O00548 723 aa11.02□□□□□ -0.65
HERC1-212ENST00000561348 ABLIM1O14639 778 aa11.02□□□□□ -0.65
HERC1-212ENST00000561348 FSCN2O14926 492 aa11.02□□□□□ -0.65
HERC1-212ENST00000561348 NCK2O43639 380 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms