RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 COL19A1Q14993 1142 aa15.2■□□□□ 0.02
TPM1-230ENST00000561266 CSPP1Q1MSJ5 1256 aa15.2■□□□□ 0.02
TPM1-230ENST00000561266 TIGD5Q53EQ6 642 aa15.2■□□□□ 0.02
TPM1-230ENST00000561266 L1TD1Q5T7N2 865 aaKnown RBP15.2■□□□□ 0.02
TPM1-230ENST00000561266 DDX53Q86TM3 631 aaKnown RBP15.2■□□□□ 0.02
TPM1-230ENST00000561266 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.2■□□□□ 0.02
TPM1-230ENST00000561266 HACE1Q8IYU2 909 aa15.2■□□□□ 0.02
TPM1-230ENST00000561266 VPS52Q8N1B4 723 aa15.2■□□□□ 0.02
TPM1-230ENST00000561266 VN1R2Q8NFZ6 395 aa15.2■□□□□ 0.02
TPM1-230ENST00000561266 RSPH1Q8WYR4 309 aa15.2■□□□□ 0.02
TPM1-230ENST00000561266 TCF25Q9BQ70 676 aa15.2■□□□□ 0.02
TPM1-230ENST00000561266 ZBP1Q9H171 429 aa15.2■□□□□ 0.02
TPM1-230ENST00000561266 IGFLR1Q9H665 355 aa15.2■□□□□ 0.02
TPM1-230ENST00000561266 STYXL1Q9Y6J8 313 aa15.2■□□□□ 0.02
TPM1-230ENST00000561266 ZMYM2Q9UBW7 1377 aa15.2■□□□□ 0.02
TPM1-230ENST00000561266 A0A0C4DFX4 3053 aa15.2■□□□□ 0.02
TPM1-230ENST00000561266 HNRNPDLO14979 420 aaKnown RBP15.19■□□□□ 0.02
TPM1-230ENST00000561266 GLP2RO95838 553 aa15.19■□□□□ 0.02
TPM1-230ENST00000561266 THP07101 528 aa15.19■□□□□ 0.02
TPM1-230ENST00000561266 CXCL8P10145 99 aa15.19■□□□□ 0.02
TPM1-230ENST00000561266 PPM1AP35813 382 aa15.19■□□□□ 0.02
TPM1-230ENST00000561266 SYKP43405 635 aa15.19■□□□□ 0.02
TPM1-230ENST00000561266 WNT7BP56706 349 aa15.19■□□□□ 0.02
TPM1-230ENST00000561266 SPAG1Q07617 926 aa15.19■□□□□ 0.02
TPM1-230ENST00000561266 CTC1Q2NKJ3 1217 aa15.19■□□□□ 0.02
TPM1-230ENST00000561266 CRELD2Q6UXH1 353 aaPredicted RBP15.19■□□□□ 0.02
TPM1-230ENST00000561266 UNC13DQ70J99 1090 aa15.19■□□□□ 0.02
TPM1-230ENST00000561266 EPM2AIP1Q7L775 607 aaPredicted RBP15.19■□□□□ 0.02
TPM1-230ENST00000561266 CCDC65Q8IXS2 484 aa15.19■□□□□ 0.02
TPM1-230ENST00000561266 RNF168Q8IYW5 571 aaPredicted RBP15.19■□□□□ 0.02
TPM1-230ENST00000561266 SLC17A8Q8NDX2 589 aa15.19■□□□□ 0.02
TPM1-230ENST00000561266 MICAL1Q8TDZ2 1067 aa15.19■□□□□ 0.02
TPM1-230ENST00000561266 HASPINQ8TF76 798 aa15.19■□□□□ 0.02
TPM1-230ENST00000561266 C18orf25Q96B23 403 aaPredicted RBP15.19■□□□□ 0.02
TPM1-230ENST00000561266 TMEM169Q96HH4 297 aa15.19■□□□□ 0.02
TPM1-230ENST00000561266 B3GALT6Q96L58 329 aa15.19■□□□□ 0.02
TPM1-230ENST00000561266 ACAP3Q96P50 834 aa15.19■□□□□ 0.02
TPM1-230ENST00000561266 RPS6KC1Q96S38 1066 aa15.19■□□□□ 0.02
TPM1-230ENST00000561266 CCDC94Q9BW85 323 aaPredicted RBP15.19■□□□□ 0.02
TPM1-230ENST00000561266 GPR62Q9BZJ7 368 aa15.19■□□□□ 0.02
TPM1-230ENST00000561266 CIZ1Q9ULV3 898 aaPredicted RBP15.19■□□□□ 0.02
TPM1-230ENST00000561266 VCANP13611 3396 aa15.19■□□□□ 0.02
TPM1-230ENST00000561266 PLXNA3P51805 1871 aa15.18■□□□□ 0.02
TPM1-230ENST00000561266 TTC26A0AVF1 554 aa15.18■□□□□ 0.02
TPM1-230ENST00000561266 C2orf71A6NGG8 1288 aa15.18■□□□□ 0.02
TPM1-230ENST00000561266 LACTBL1A8MY62 500 aa15.18■□□□□ 0.02
TPM1-230ENST00000561266 GADD45BO75293 160 aaPredicted RBP15.18■□□□□ 0.02
TPM1-230ENST00000561266 ZNF202O95125 648 aa15.18■□□□□ 0.02
TPM1-230ENST00000561266 MATR3P43243 847 aaKnown RBP eCLIP15.18■□□□□ 0.02
TPM1-230ENST00000561266 NRIP1P48552 1158 aa15.18■□□□□ 0.02
TPM1-230ENST00000561266 ACOT2P49753 483 aa15.18■□□□□ 0.02
TPM1-230ENST00000561266 KCNQ1P51787 676 aa15.18■□□□□ 0.02
TPM1-230ENST00000561266 KRT17Q04695 432 aa15.18■□□□□ 0.02
TPM1-230ENST00000561266 TUSC3Q13454 348 aa15.18■□□□□ 0.02
TPM1-230ENST00000561266 SNW1Q13573 536 aaKnown RBP15.18■□□□□ 0.02
TPM1-230ENST00000561266 ENOX2Q16206 610 aaKnown RBP15.18■□□□□ 0.02
TPM1-230ENST00000561266 C3orf58Q8NDZ4 430 aa15.18■□□□□ 0.02
TPM1-230ENST00000561266 ENGASEQ8NFI3 743 aa15.18■□□□□ 0.02
TPM1-230ENST00000561266 FEZF2Q8TBJ5 459 aa15.18■□□□□ 0.02
TPM1-230ENST00000561266 UBE2ZQ9H832 354 aaPredicted RBP15.18■□□□□ 0.02
TPM1-230ENST00000561266 MAGEF1Q9HAY2 307 aa15.18■□□□□ 0.02
TPM1-230ENST00000561266 CNTN3Q9P232 1028 aa15.18■□□□□ 0.02
TPM1-230ENST00000561266 OGTO15294 1046 aa15.17■□□□□ 0.02
TPM1-230ENST00000561266 LILRB3O75022 631 aa15.17■□□□□ 0.02
TPM1-230ENST00000561266 TBX10O75333 385 aa15.17■□□□□ 0.02
TPM1-230ENST00000561266 KIF4AO95239 1232 aa15.17■□□□□ 0.02
TPM1-230ENST00000561266 CXCL14O95715 111 aa15.17■□□□□ 0.02
TPM1-230ENST00000561266 KCNE1P15382 129 aa15.17■□□□□ 0.02
TPM1-230ENST00000561266 ANP32AP39687 249 aaKnown RBP15.17■□□□□ 0.02
TPM1-230ENST00000561266 GUCY2FP51841 1108 aa15.17■□□□□ 0.02
TPM1-230ENST00000561266 AMPD3Q01432 767 aa15.17■□□□□ 0.02
TPM1-230ENST00000561266 ADAM15Q13444 863 aa15.17■□□□□ 0.02
TPM1-230ENST00000561266 KCNC3Q14003 757 aa15.17■□□□□ 0.02
TPM1-230ENST00000561266 KMT5BQ4FZB7 885 aa15.17■□□□□ 0.02
TPM1-230ENST00000561266 FAM26FQ5R3K3 315 aa15.17■□□□□ 0.02
TPM1-230ENST00000561266 SCARA3Q6AZY7 606 aa15.17■□□□□ 0.02
TPM1-230ENST00000561266 KRBA2Q6ZNG9 492 aa15.17■□□□□ 0.02
TPM1-230ENST00000561266 TMC7Q7Z402 723 aa15.17■□□□□ 0.02
TPM1-230ENST00000561266 CEP57L1Q8IYX8 460 aa15.17■□□□□ 0.02
TPM1-230ENST00000561266 FMR1NBQ8N0W7 255 aaPredicted RBP15.17■□□□□ 0.02
TPM1-230ENST00000561266 MRPL43Q8N983 215 aaKnown RBP15.17■□□□□ 0.02
TPM1-230ENST00000561266 HLA-CQ95604 372 aa15.17■□□□□ 0.02
TPM1-230ENST00000561266 HVCN1Q96D96 273 aa15.17■□□□□ 0.02
TPM1-230ENST00000561266 FAM84AQ96KN4 292 aa15.17■□□□□ 0.02
TPM1-230ENST00000561266 ACCSQ96QU6 501 aa15.17■□□□□ 0.02
TPM1-230ENST00000561266 CBWD1Q9BRT8 395 aa15.17■□□□□ 0.02
TPM1-230ENST00000561266 MSTO1Q9BUK6 570 aa15.17■□□□□ 0.02
TPM1-230ENST00000561266 LRRC27Q9C0I9 530 aa15.17■□□□□ 0.02
TPM1-230ENST00000561266 SLC39A2Q9NP94 309 aa15.17■□□□□ 0.02
TPM1-230ENST00000561266 ENTPD7Q9NQZ7 604 aa15.17■□□□□ 0.02
TPM1-230ENST00000561266 TSHZ2Q9NRE2 1034 aa15.17■□□□□ 0.02
TPM1-230ENST00000561266 PUF60Q9UHX1 559 aaKnown RBP15.17■□□□□ 0.02
TPM1-230ENST00000561266 CPSF3Q9UKF6 684 aaKnown RBP15.17■□□□□ 0.02
TPM1-230ENST00000561266 SCN1AP35498 2009 aa15.17■□□□□ 0.02
TPM1-230ENST00000561266 C5orf42Q9H799 3197 aa15.16■□□□□ 0.02
TPM1-230ENST00000561266 PVALEFA0A1B0GWK0 134 aa15.16■□□□□ 0.02
TPM1-230ENST00000561266 H3BQ06 376 aaPredicted RBP15.16■□□□□ 0.02
TPM1-230ENST00000561266 TGFB1I1O43294 461 aa15.16■□□□□ 0.02
TPM1-230ENST00000561266 ADRB2P07550 413 aa15.16■□□□□ 0.02
TPM1-230ENST00000561266 CLTAP09496 248 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms