RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 B4GALT5O43286 388 aa11.84□□□□□ -0.51
TPM1-227ENST00000560970 USO1O60763 962 aaKnown RBP11.84□□□□□ -0.51
TPM1-227ENST00000560970 NPTXRO95502 500 aa11.84□□□□□ -0.51
TPM1-227ENST00000560970 CFHP08603 1231 aa11.84□□□□□ -0.51
TPM1-227ENST00000560970 SRFP11831 508 aa11.84□□□□□ -0.51
TPM1-227ENST00000560970 GLRA2P23416 452 aa11.84□□□□□ -0.51
TPM1-227ENST00000560970 ARL2P36404 184 aa11.84□□□□□ -0.51
TPM1-227ENST00000560970 ANGPT1Q15389 498 aa11.84□□□□□ -0.51
TPM1-227ENST00000560970 USP41Q3LFD5 358 aa11.84□□□□□ -0.51
TPM1-227ENST00000560970 TAS1R1Q7RTX1 841 aa11.84□□□□□ -0.51
TPM1-227ENST00000560970 KCNK18Q7Z418 384 aa11.84□□□□□ -0.51
TPM1-227ENST00000560970 DTWD2Q8NBA8 298 aa11.84□□□□□ -0.51
TPM1-227ENST00000560970 ERMNQ8TAM6 284 aa11.84□□□□□ -0.51
TPM1-227ENST00000560970 NXPE3Q969Y0 559 aa11.84□□□□□ -0.51
TPM1-227ENST00000560970 B3GALT6Q96L58 329 aa11.84□□□□□ -0.51
TPM1-227ENST00000560970 USP28Q96RU2 1077 aa11.84□□□□□ -0.51
TPM1-227ENST00000560970 MYADMQ96S97 322 aa11.84□□□□□ -0.51
TPM1-227ENST00000560970 RNF39Q9H2S5 420 aa11.84□□□□□ -0.51
TPM1-227ENST00000560970 PIDD1Q9HB75 910 aa11.84□□□□□ -0.51
TPM1-227ENST00000560970 CHST7Q9NS84 486 aa11.84□□□□□ -0.51
TPM1-227ENST00000560970 WNT16Q9UBV4 365 aa11.84□□□□□ -0.51
TPM1-227ENST00000560970 NUP210Q8TEM1 1887 aaPredicted RBP11.83□□□□□ -0.52
TPM1-227ENST00000560970 TGM5O43548 720 aa11.83□□□□□ -0.52
TPM1-227ENST00000560970 FOXK2Q01167 660 aa11.83□□□□□ -0.52
TPM1-227ENST00000560970 CEBPZQ03701 1054 aaKnown RBP11.83□□□□□ -0.52
TPM1-227ENST00000560970 PDIA5Q14554 519 aa11.83□□□□□ -0.52
TPM1-227ENST00000560970 HSP90AA2PQ14568 343 aaPredicted RBP11.83□□□□□ -0.52
TPM1-227ENST00000560970 ARL6IP4Q66PJ3 421 aaKnown RBP11.83□□□□□ -0.52
TPM1-227ENST00000560970 CDCA2Q69YH5 1023 aaPredicted RBP11.83□□□□□ -0.52
TPM1-227ENST00000560970 GSTCDQ8NEC7 633 aa11.83□□□□□ -0.52
TPM1-227ENST00000560970 LRRC15Q8TF66 581 aa11.83□□□□□ -0.52
TPM1-227ENST00000560970 RSAD2Q8WXG1 361 aa11.83□□□□□ -0.52
TPM1-227ENST00000560970 RIN2Q8WYP3 895 aaPredicted RBP11.83□□□□□ -0.52
TPM1-227ENST00000560970 PRIMPOLQ96LW4 560 aa11.83□□□□□ -0.52
TPM1-227ENST00000560970 PNMA5Q96PV4 448 aa11.83□□□□□ -0.52
TPM1-227ENST00000560970 GPR62Q9BZJ7 368 aa11.83□□□□□ -0.52
TPM1-227ENST00000560970 ZSCAN16Q9H4T2 348 aaPredicted RBP11.83□□□□□ -0.52
TPM1-227ENST00000560970 TBC1D17Q9HA65 648 aa11.83□□□□□ -0.52
TPM1-227ENST00000560970 GPRC5CQ9NQ84 441 aa11.83□□□□□ -0.52
TPM1-227ENST00000560970 ARHGEF3Q9NR81 526 aa11.83□□□□□ -0.52
TPM1-227ENST00000560970 DDX19AQ9NUU7 478 aaKnown RBP11.83□□□□□ -0.52
TPM1-227ENST00000560970 MIOSQ9NXC5 875 aa11.83□□□□□ -0.52
TPM1-227ENST00000560970 FNIP2Q9P278 1114 aa11.83□□□□□ -0.52
TPM1-227ENST00000560970 FBXW11Q9UKB1 542 aa11.83□□□□□ -0.52
TPM1-227ENST00000560970 CA14Q9ULX7 337 aa11.83□□□□□ -0.52
TPM1-227ENST00000560970 KRBA1A5PL33 1030 aa11.82□□□□□ -0.52
TPM1-227ENST00000560970 LRRIQ4A6NIV6 560 aa11.82□□□□□ -0.52
TPM1-227ENST00000560970 E9PMD0 336 aa11.82□□□□□ -0.52
TPM1-227ENST00000560970 PI15O43692 258 aa11.82□□□□□ -0.52
TPM1-227ENST00000560970 BMP15O95972 392 aa11.82□□□□□ -0.52
TPM1-227ENST00000560970 F13A1P00488 732 aa11.82□□□□□ -0.52
TPM1-227ENST00000560970 ZSCAN22P10073 491 aaPredicted RBP11.82□□□□□ -0.52
TPM1-227ENST00000560970 MYBP10242 640 aa11.82□□□□□ -0.52
TPM1-227ENST00000560970 MUTP22033 750 aa11.82□□□□□ -0.52
TPM1-227ENST00000560970 AKAP5P24588 427 aa11.82□□□□□ -0.52
TPM1-227ENST00000560970 MARCKSP29966 332 aaPredicted RBP11.82□□□□□ -0.52
TPM1-227ENST00000560970 TUSC3Q13454 348 aa11.82□□□□□ -0.52
TPM1-227ENST00000560970 HTR4Q13639 388 aa11.82□□□□□ -0.52
TPM1-227ENST00000560970 TMEM119Q4V9L6 283 aa11.82□□□□□ -0.52
TPM1-227ENST00000560970 HYIQ5T013 277 aa11.82□□□□□ -0.52
TPM1-227ENST00000560970 LIN9Q5TKA1 542 aa11.82□□□□□ -0.52
TPM1-227ENST00000560970 CDR2LQ86X02 465 aaPredicted RBP11.82□□□□□ -0.52
TPM1-227ENST00000560970 PALB2Q86YC2 1186 aa11.82□□□□□ -0.52
TPM1-227ENST00000560970 GLYCTKQ8IVS8 523 aa11.82□□□□□ -0.52
TPM1-227ENST00000560970 ZBTB8OSQ8IWT0 167 aa11.82□□□□□ -0.52
TPM1-227ENST00000560970 MCPH1Q8NEM0 835 aa11.82□□□□□ -0.52
TPM1-227ENST00000560970 NACC1Q96RE7 527 aa11.82□□□□□ -0.52
TPM1-227ENST00000560970 RAB34Q9BZG1 259 aa11.82□□□□□ -0.52
TPM1-227ENST00000560970 PRKD2Q9BZL6 878 aa11.82□□□□□ -0.52
TPM1-227ENST00000560970 NT5C3AQ9H0P0 336 aa11.82□□□□□ -0.52
TPM1-227ENST00000560970 PRMT7Q9NVM4 692 aaPredicted RBP11.82□□□□□ -0.52
TPM1-227ENST00000560970 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.82□□□□□ -0.52
TPM1-227ENST00000560970 FBXO2Q9UK22 296 aaPredicted RBP11.82□□□□□ -0.52
TPM1-227ENST00000560970 KIAA1024Q9UPX6 916 aa11.82□□□□□ -0.52
TPM1-227ENST00000560970 ANK1P16157 1881 aa11.82□□□□□ -0.52
TPM1-227ENST00000560970 A0A1B0GUA9 196 aa11.81□□□□□ -0.52
TPM1-227ENST00000560970 ANHXE9PGG2 379 aa11.81□□□□□ -0.52
TPM1-227ENST00000560970 N4BP3O15049 544 aa11.81□□□□□ -0.52
TPM1-227ENST00000560970 ZMYND10O75800 440 aa11.81□□□□□ -0.52
TPM1-227ENST00000560970 KIF4AO95239 1232 aa11.81□□□□□ -0.52
TPM1-227ENST00000560970 SPATA31D3P0C874 917 aa11.81□□□□□ -0.52
TPM1-227ENST00000560970 XRCC6P12956 609 aaKnown RBP eCLIP11.81□□□□□ -0.52
TPM1-227ENST00000560970 RPL17P18621 184 aaKnown RBP11.81□□□□□ -0.52
TPM1-227ENST00000560970 FOXD4L6Q3SYB3 417 aaPredicted RBP11.81□□□□□ -0.52
TPM1-227ENST00000560970 SPECC1Q5M775 1068 aa11.81□□□□□ -0.52
TPM1-227ENST00000560970 RTP2Q5QGT7 225 aa11.81□□□□□ -0.52
TPM1-227ENST00000560970 KRT79Q5XKE5 535 aa11.81□□□□□ -0.52
TPM1-227ENST00000560970 FOXD4L3Q6VB84 417 aaPredicted RBP11.81□□□□□ -0.52
TPM1-227ENST00000560970 SPATA31D4Q6ZUB0 917 aa11.81□□□□□ -0.52
TPM1-227ENST00000560970 MAEAQ7L5Y9 396 aa11.81□□□□□ -0.52
TPM1-227ENST00000560970 ADSSL1Q8N142 457 aa11.81□□□□□ -0.52
TPM1-227ENST00000560970 GPR152Q8TDT2 470 aa11.81□□□□□ -0.52
TPM1-227ENST00000560970 HASPINQ8TF76 798 aa11.81□□□□□ -0.52
TPM1-227ENST00000560970 CLIC6Q96NY7 704 aa11.81□□□□□ -0.52
TPM1-227ENST00000560970 PLIN2Q99541 437 aa11.81□□□□□ -0.52
TPM1-227ENST00000560970 BHMT2Q9H2M3 363 aa11.81□□□□□ -0.52
TPM1-227ENST00000560970 SLC2A4RGQ9NR83 387 aa11.81□□□□□ -0.52
TPM1-227ENST00000560970 KLK14Q9P0G3 267 aa11.81□□□□□ -0.52
TPM1-227ENST00000560970 CACNG4Q9UBN1 327 aa11.81□□□□□ -0.52
TPM1-227ENST00000560970 PARP2Q9UGN5 583 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms