RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 CIZ1Q9ULV3 898 aaPredicted RBP16.7■□□□□ 0.26
SNRPA1-213ENST00000560856 PRG3Q9Y2Y8 225 aaPredicted RBP16.7■□□□□ 0.26
SNRPA1-213ENST00000560856 SMIM28A0A1B0GU29 152 aa16.69■□□□□ 0.26
SNRPA1-213ENST00000560856 CTSAP10619 480 aa16.69■□□□□ 0.26
SNRPA1-213ENST00000560856 HARSP12081 509 aaKnown RBP16.69■□□□□ 0.26
SNRPA1-213ENST00000560856 KCNE1P15382 129 aa16.69■□□□□ 0.26
SNRPA1-213ENST00000560856 IGFBP6P24592 240 aaPredicted RBP16.69■□□□□ 0.26
SNRPA1-213ENST00000560856 OR1G1P47890 313 aa16.69■□□□□ 0.26
SNRPA1-213ENST00000560856 NDUFA8P51970 172 aa16.69■□□□□ 0.26
SNRPA1-213ENST00000560856 ADAM15Q13444 863 aa16.69■□□□□ 0.26
SNRPA1-213ENST00000560856 CUL4BQ13620 913 aa16.69■□□□□ 0.26
SNRPA1-213ENST00000560856 KCNC3Q14003 757 aa16.69■□□□□ 0.26
SNRPA1-213ENST00000560856 GLRA4Q5JXX5 417 aa16.69■□□□□ 0.26
SNRPA1-213ENST00000560856 ZBTB41Q5SVQ8 909 aa16.69■□□□□ 0.26
SNRPA1-213ENST00000560856 L1TD1Q5T7N2 865 aaKnown RBP16.69■□□□□ 0.26
SNRPA1-213ENST00000560856 PLPP4Q5VZY2 271 aa16.69■□□□□ 0.26
SNRPA1-213ENST00000560856 MRPL43Q8N983 215 aaKnown RBP16.69■□□□□ 0.26
SNRPA1-213ENST00000560856 MICAL1Q8TDZ2 1067 aa16.69■□□□□ 0.26
SNRPA1-213ENST00000560856 ATXN2LQ8WWM7 1075 aaKnown RBP16.69■□□□□ 0.26
SNRPA1-213ENST00000560856 RABGGTAQ92696 567 aa16.69■□□□□ 0.26
SNRPA1-213ENST00000560856 PAGE5Q96GU1 130 aa16.69■□□□□ 0.26
SNRPA1-213ENST00000560856 BLZF1Q9H2G9 400 aa16.69■□□□□ 0.26
SNRPA1-213ENST00000560856 CNTN3Q9P232 1028 aa16.69■□□□□ 0.26
SNRPA1-213ENST00000560856 TTC28Q96AY4 2481 aa16.69■□□□□ 0.26
SNRPA1-213ENST00000560856 TTC26A0AVF1 554 aa16.68■□□□□ 0.26
SNRPA1-213ENST00000560856 C2orf71A6NGG8 1288 aa16.68■□□□□ 0.26
SNRPA1-213ENST00000560856 OGTO15294 1046 aa16.68■□□□□ 0.26
SNRPA1-213ENST00000560856 LINC01565O15544 149 aa16.68■□□□□ 0.26
SNRPA1-213ENST00000560856 NCK2O43639 380 aa16.68■□□□□ 0.26
SNRPA1-213ENST00000560856 KLRC4O43908 158 aa16.68■□□□□ 0.26
SNRPA1-213ENST00000560856 LILRB3O75022 631 aa16.68■□□□□ 0.26
SNRPA1-213ENST00000560856 GCNT3O95395 438 aa16.68■□□□□ 0.26
SNRPA1-213ENST00000560856 ADRB2P07550 413 aa16.68■□□□□ 0.26
SNRPA1-213ENST00000560856 CLTAP09496 248 aa16.68■□□□□ 0.26
SNRPA1-213ENST00000560856 ADSSP30520 456 aa16.68■□□□□ 0.26
SNRPA1-213ENST00000560856 HOXD13P35453 343 aa16.68■□□□□ 0.26
SNRPA1-213ENST00000560856 TNFSF9P41273 254 aa16.68■□□□□ 0.26
SNRPA1-213ENST00000560856 AFMP43652 599 aa16.68■□□□□ 0.26
SNRPA1-213ENST00000560856 NRIP1P48552 1158 aa16.68■□□□□ 0.26
SNRPA1-213ENST00000560856 ASIC1P78348 528 aa16.68■□□□□ 0.26
SNRPA1-213ENST00000560856 SOX4Q06945 474 aaPredicted RBP16.68■□□□□ 0.26
SNRPA1-213ENST00000560856 DLX2Q07687 328 aaPredicted RBP16.68■□□□□ 0.26
SNRPA1-213ENST00000560856 DUSP6Q16828 381 aa16.68■□□□□ 0.26
SNRPA1-213ENST00000560856 CD300LGQ6UXG3 332 aa16.68■□□□□ 0.26
SNRPA1-213ENST00000560856 UNC13DQ70J99 1090 aa16.68■□□□□ 0.26
SNRPA1-213ENST00000560856 EPM2AIP1Q7L775 607 aaPredicted RBP16.68■□□□□ 0.26
SNRPA1-213ENST00000560856 TAS1R1Q7RTX1 841 aa16.68■□□□□ 0.26
SNRPA1-213ENST00000560856 TMC7Q7Z402 723 aa16.68■□□□□ 0.26
SNRPA1-213ENST00000560856 EFHBQ8N7U6 833 aa16.68■□□□□ 0.26
SNRPA1-213ENST00000560856 FSIP1Q8NA03 581 aa16.68■□□□□ 0.26
SNRPA1-213ENST00000560856 VN1R2Q8NFZ6 395 aa16.68■□□□□ 0.26
SNRPA1-213ENST00000560856 AUTS2Q8WXX7 1259 aa16.68■□□□□ 0.26
SNRPA1-213ENST00000560856 COLEC11Q9BWP8 271 aa16.68■□□□□ 0.26
SNRPA1-213ENST00000560856 TLE6Q9H808 572 aa16.68■□□□□ 0.26
SNRPA1-213ENST00000560856 TOPORSQ9NS56 1045 aaPredicted RBP16.68■□□□□ 0.26
SNRPA1-213ENST00000560856 USP25Q9UHP3 1055 aa16.68■□□□□ 0.26
SNRPA1-213ENST00000560856 PCDHB13Q9Y5F0 798 aa16.68■□□□□ 0.26
SNRPA1-213ENST00000560856 IRAK3Q9Y616 596 aa16.68■□□□□ 0.26
SNRPA1-213ENST00000560856 CITO14578 2027 aa16.67■□□□□ 0.26
SNRPA1-213ENST00000560856 PVALEFA0A1B0GWK0 134 aa16.67■□□□□ 0.26
SNRPA1-213ENST00000560856 CASTOR2A6NHX0 329 aa16.67■□□□□ 0.26
SNRPA1-213ENST00000560856 PER2O15055 1255 aa16.67■□□□□ 0.26
SNRPA1-213ENST00000560856 PRPF6O94906 941 aaKnown RBP16.67■□□□□ 0.26
SNRPA1-213ENST00000560856 CXCL14O95715 111 aa16.67■□□□□ 0.26
SNRPA1-213ENST00000560856 GLP2RO95838 553 aa16.67■□□□□ 0.26
SNRPA1-213ENST00000560856 SYKP43405 635 aa16.67■□□□□ 0.26
SNRPA1-213ENST00000560856 YARSP54577 528 aaKnown RBP16.67■□□□□ 0.26
SNRPA1-213ENST00000560856 MRPS5P82675 430 aaKnown RBP16.67■□□□□ 0.26
SNRPA1-213ENST00000560856 ALCAMQ13740 583 aa16.67■□□□□ 0.26
SNRPA1-213ENST00000560856 ENOX2Q16206 610 aaKnown RBP16.67■□□□□ 0.26
SNRPA1-213ENST00000560856 RBM23Q86U06 439 aaKnown RBP16.67■□□□□ 0.26
SNRPA1-213ENST00000560856 CEP57L1Q8IYX8 460 aa16.67■□□□□ 0.26
SNRPA1-213ENST00000560856 ASB2Q96Q27 587 aa16.67■□□□□ 0.26
SNRPA1-213ENST00000560856 ACCSQ96QU6 501 aa16.67■□□□□ 0.26
SNRPA1-213ENST00000560856 GPR62Q9BZJ7 368 aa16.67■□□□□ 0.26
SNRPA1-213ENST00000560856 IGFLR1Q9H665 355 aa16.67■□□□□ 0.26
SNRPA1-213ENST00000560856 ENTPD7Q9NQZ7 604 aa16.67■□□□□ 0.26
SNRPA1-213ENST00000560856 CPSF3Q9UKF6 684 aaKnown RBP16.67■□□□□ 0.26
SNRPA1-213ENST00000560856 TBX10O75333 385 aa16.66■□□□□ 0.26
SNRPA1-213ENST00000560856 SOD2P04179 222 aa16.66■□□□□ 0.26
SNRPA1-213ENST00000560856 CXCL8P10145 99 aa16.66■□□□□ 0.26
SNRPA1-213ENST00000560856 BMP1P13497 986 aa16.66■□□□□ 0.26
SNRPA1-213ENST00000560856 RBM10P98175 930 aaKnown RBP16.66■□□□□ 0.26
SNRPA1-213ENST00000560856 HSP90AA2PQ14568 343 aaPredicted RBP16.66■□□□□ 0.26
SNRPA1-213ENST00000560856 SMC1AQ14683 1233 aaKnown RBP16.66■□□□□ 0.26
SNRPA1-213ENST00000560856 PTPN14Q15678 1187 aa16.66■□□□□ 0.26
SNRPA1-213ENST00000560856 ZBTB6Q15916 424 aa16.66■□□□□ 0.26
SNRPA1-213ENST00000560856 FAM26FQ5R3K3 315 aa16.66■□□□□ 0.26
SNRPA1-213ENST00000560856 SLFN12LQ6IEE8 588 aa16.66■□□□□ 0.26
SNRPA1-213ENST00000560856 CRELD2Q6UXH1 353 aaPredicted RBP16.66■□□□□ 0.26
SNRPA1-213ENST00000560856 PPP2R3CQ969Q6 453 aa16.66■□□□□ 0.26
SNRPA1-213ENST00000560856 MSTO1Q9BUK6 570 aa16.66■□□□□ 0.26
SNRPA1-213ENST00000560856 HERC2P3Q9BVR0 1158 aa16.66■□□□□ 0.26
SNRPA1-213ENST00000560856 PLEKHA5Q9HAU0 1116 aa16.66■□□□□ 0.26
SNRPA1-213ENST00000560856 GOLGA2P5Q9HBQ8 144 aa16.66■□□□□ 0.26
SNRPA1-213ENST00000560856 CHST7Q9NS84 486 aa16.66■□□□□ 0.26
SNRPA1-213ENST00000560856 CLDND1Q9NY35 253 aa16.66■□□□□ 0.26
SNRPA1-213ENST00000560856 CLEC1BQ9P126 229 aa16.66■□□□□ 0.26
SNRPA1-213ENST00000560856 ADAM28Q9UKQ2 775 aa16.66■□□□□ 0.26
SNRPA1-213ENST00000560856 VCANP13611 3396 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms