RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 CLASP2O75122 1294 aaKnown RBP14.18□□□□□ -0.14
CTDSPL2-209ENST00000560620 PROZP22891 400 aa14.18□□□□□ -0.14
CTDSPL2-209ENST00000560620 SMAD4Q13485 552 aaKnown RBP14.18□□□□□ -0.14
CTDSPL2-209ENST00000560620 PTPN14Q15678 1187 aa14.18□□□□□ -0.14
CTDSPL2-209ENST00000560620 TPRNQ4KMQ1 711 aa14.18□□□□□ -0.14
CTDSPL2-209ENST00000560620 ZC2HC1CQ53FD0 456 aaPredicted RBP14.18□□□□□ -0.14
CTDSPL2-209ENST00000560620 HERC4Q5GLZ8 1057 aaPredicted RBP14.18□□□□□ -0.14
CTDSPL2-209ENST00000560620 FUT10Q6P4F1 479 aa14.18□□□□□ -0.14
CTDSPL2-209ENST00000560620 TAS1R1Q7RTX1 841 aa14.18□□□□□ -0.14
CTDSPL2-209ENST00000560620 CEP57Q86XR8 500 aa14.18□□□□□ -0.14
CTDSPL2-209ENST00000560620 IQUBQ8NA54 791 aa14.18□□□□□ -0.14
CTDSPL2-209ENST00000560620 VN1R2Q8NFZ6 395 aa14.18□□□□□ -0.14
CTDSPL2-209ENST00000560620 CASP10Q92851 521 aa14.18□□□□□ -0.14
CTDSPL2-209ENST00000560620 LRRC27Q9C0I9 530 aa14.18□□□□□ -0.14
CTDSPL2-209ENST00000560620 PCDHA7Q9UN72 937 aa14.18□□□□□ -0.14
CTDSPL2-209ENST00000560620 ATP6V1DQ9Y5K8 247 aa14.18□□□□□ -0.14
CTDSPL2-209ENST00000560620 HCFC2Q9Y5Z7 792 aa14.18□□□□□ -0.14
CTDSPL2-209ENST00000560620 SF3B1O75533 1304 aaKnown RBP eCLIP14.17□□□□□ -0.14
CTDSPL2-209ENST00000560620 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.17□□□□□ -0.14
CTDSPL2-209ENST00000560620 SMIM28A0A1B0GU29 152 aa14.17□□□□□ -0.14
CTDSPL2-209ENST00000560620 B3GAT3O94766 335 aa14.17□□□□□ -0.14
CTDSPL2-209ENST00000560620 KIF4AO95239 1232 aa14.17□□□□□ -0.14
CTDSPL2-209ENST00000560620 GCNT3O95395 438 aa14.17□□□□□ -0.14
CTDSPL2-209ENST00000560620 GAP43P17677 238 aa14.17□□□□□ -0.14
CTDSPL2-209ENST00000560620 KRT85P78386 507 aa14.17□□□□□ -0.14
CTDSPL2-209ENST00000560620 AMPD3Q01432 767 aa14.17□□□□□ -0.14
CTDSPL2-209ENST00000560620 MCL1Q07820 350 aa14.17□□□□□ -0.14
CTDSPL2-209ENST00000560620 COASYQ13057 564 aa14.17□□□□□ -0.14
CTDSPL2-209ENST00000560620 USP41Q3LFD5 358 aa14.17□□□□□ -0.14
CTDSPL2-209ENST00000560620 ANKRD54Q6NXT1 300 aa14.17□□□□□ -0.14
CTDSPL2-209ENST00000560620 SHC4Q6S5L8 630 aa14.17□□□□□ -0.14
CTDSPL2-209ENST00000560620 PPFIBP1Q86W92 1011 aa14.17□□□□□ -0.14
CTDSPL2-209ENST00000560620 MSLNLQ96KJ4 702 aa14.17□□□□□ -0.14
CTDSPL2-209ENST00000560620 B3GALT6Q96L58 329 aa14.17□□□□□ -0.14
CTDSPL2-209ENST00000560620 SPATA32Q96LK8 384 aa14.17□□□□□ -0.14
CTDSPL2-209ENST00000560620 MSTO1Q9BUK6 570 aa14.17□□□□□ -0.14
CTDSPL2-209ENST00000560620 HERC2P3Q9BVR0 1158 aa14.17□□□□□ -0.14
CTDSPL2-209ENST00000560620 GPR62Q9BZJ7 368 aa14.17□□□□□ -0.14
CTDSPL2-209ENST00000560620 GOLGA2P5Q9HBQ8 144 aa14.17□□□□□ -0.14
CTDSPL2-209ENST00000560620 SLC38A7Q9NVC3 462 aa14.17□□□□□ -0.14
CTDSPL2-209ENST00000560620 PANK4Q9NVE7 773 aa14.17□□□□□ -0.14
CTDSPL2-209ENST00000560620 SEL1LQ9UBV2 794 aa14.17□□□□□ -0.14
CTDSPL2-209ENST00000560620 IRAK3Q9Y616 596 aa14.17□□□□□ -0.14
CTDSPL2-209ENST00000560620 ABLIM1O14639 778 aa14.16□□□□□ -0.14
CTDSPL2-209ENST00000560620 POLR2DO15514 142 aaKnown RBP14.16□□□□□ -0.14
CTDSPL2-209ENST00000560620 BRD1O95696 1058 aa14.16□□□□□ -0.14
CTDSPL2-209ENST00000560620 ADH1AP07327 375 aa14.16□□□□□ -0.14
CTDSPL2-209ENST00000560620 CNPP09543 421 aaKnown RBP14.16□□□□□ -0.14
CTDSPL2-209ENST00000560620 CLCNKBP51801 687 aa14.16□□□□□ -0.14
CTDSPL2-209ENST00000560620 GTF2BQ00403 316 aa14.16□□□□□ -0.14
CTDSPL2-209ENST00000560620 GLYCTKQ8IVS8 523 aa14.16□□□□□ -0.14
CTDSPL2-209ENST00000560620 CCDC65Q8IXS2 484 aa14.16□□□□□ -0.14
CTDSPL2-209ENST00000560620 SMRP1Q8NCR6 262 aa14.16□□□□□ -0.14
CTDSPL2-209ENST00000560620 RIN2Q8WYP3 895 aaPredicted RBP14.16□□□□□ -0.14
CTDSPL2-209ENST00000560620 DNAJC19Q96DA6 116 aa14.16□□□□□ -0.14
CTDSPL2-209ENST00000560620 FAM212AQ96EL1 285 aa14.16□□□□□ -0.14
CTDSPL2-209ENST00000560620 SNX27Q96L92 541 aa14.16□□□□□ -0.14
CTDSPL2-209ENST00000560620 PPP1R10Q96QC0 940 aaKnown RBP14.16□□□□□ -0.14
CTDSPL2-209ENST00000560620 CUEDC2Q9H467 287 aa14.16□□□□□ -0.14
CTDSPL2-209ENST00000560620 TRIP11Q15643 1979 aa14.16□□□□□ -0.14
CTDSPL2-209ENST00000560620 CITO14578 2027 aa14.15□□□□□ -0.14
CTDSPL2-209ENST00000560620 CLTAP09496 248 aa14.15□□□□□ -0.14
CTDSPL2-209ENST00000560620 CXCL8P10145 99 aa14.15□□□□□ -0.14
CTDSPL2-209ENST00000560620 EPCAMP16422 314 aa14.15□□□□□ -0.14
CTDSPL2-209ENST00000560620 HOXB8P17481 243 aaPredicted RBP14.15□□□□□ -0.14
CTDSPL2-209ENST00000560620 ASIC1P78348 528 aa14.15□□□□□ -0.14
CTDSPL2-209ENST00000560620 PPP2R3AQ06190 1150 aa14.15□□□□□ -0.14
CTDSPL2-209ENST00000560620 NAB2Q15742 525 aa14.15□□□□□ -0.14
CTDSPL2-209ENST00000560620 SMAD2Q15796 467 aaKnown RBP14.15□□□□□ -0.14
CTDSPL2-209ENST00000560620 KYAT1Q16773 422 aa14.15□□□□□ -0.14
CTDSPL2-209ENST00000560620 AXDND1Q5T1B0 1012 aaPredicted RBP14.15□□□□□ -0.14
CTDSPL2-209ENST00000560620 FAM171A1Q5VUB5 890 aa14.15□□□□□ -0.14
CTDSPL2-209ENST00000560620 ADALQ6DHV7 355 aa14.15□□□□□ -0.14
CTDSPL2-209ENST00000560620 CES5AQ6NT32 575 aa14.15□□□□□ -0.14
CTDSPL2-209ENST00000560620 TMEM184AQ6ZMB5 413 aa14.15□□□□□ -0.14
CTDSPL2-209ENST00000560620 ZNF720Q7Z2F6 126 aa14.15□□□□□ -0.14
CTDSPL2-209ENST00000560620 MAP4K3Q8IVH8 894 aa14.15□□□□□ -0.14
CTDSPL2-209ENST00000560620 CEP57L1Q8IYX8 460 aa14.15□□□□□ -0.14
CTDSPL2-209ENST00000560620 SYCP3Q8IZU3 236 aa14.15□□□□□ -0.14
CTDSPL2-209ENST00000560620 GJD3Q8N144 294 aa14.15□□□□□ -0.14
CTDSPL2-209ENST00000560620 UROC1Q96N76 676 aa14.15□□□□□ -0.14
CTDSPL2-209ENST00000560620 KLHL5Q96PQ7 755 aa14.15□□□□□ -0.14
CTDSPL2-209ENST00000560620 POP1Q99575 1024 aaKnown RBP14.15□□□□□ -0.14
CTDSPL2-209ENST00000560620 TNMDQ9H2S6 317 aa14.15□□□□□ -0.14
CTDSPL2-209ENST00000560620 RPF1Q9H9Y2 349 aaKnown RBP14.15□□□□□ -0.14
CTDSPL2-209ENST00000560620 RCOR1Q9UKL0 485 aa14.15□□□□□ -0.14
CTDSPL2-209ENST00000560620 EXOC7Q9UPT5 735 aa14.15□□□□□ -0.14
CTDSPL2-209ENST00000560620 USP15Q9Y4E8 981 aaPredicted RBP14.15□□□□□ -0.14
CTDSPL2-209ENST00000560620 OGTO15294 1046 aa14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 TRAPPC3O43617 180 aa14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 PIGRP01833 764 aa14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 MYBP10242 640 aa14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 TNFSF9P41273 254 aa14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 DSG1Q02413 1049 aa14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 SPAG1Q07617 926 aa14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 ELAVL2Q12926 359 aaKnown RBP14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 KCNC3Q14003 757 aa14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 SLC10A6Q3KNW5 377 aa14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 RARS2Q5T160 578 aaKnown RBP14.14□□□□□ -0.15
CTDSPL2-209ENST00000560620 KIAA0319Q5VV43 1072 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms