RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 CYP3A4P08684 503 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 POLR2MP0CAP2 368 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 NEFHP12036 1026 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 FCER1AP12319 257 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 ATP2A2P16615 1042 aaKnown RBP9.17□□□□□ -0.94
CCDC33-209ENST00000560565 CIITAP33076 1130 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 GCKP35557 465 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 SREBF1P36956 1147 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 TECP42680 631 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 KLK7P49862 253 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 HADHBP55084 474 aaKnown RBP9.17□□□□□ -0.94
CCDC33-209ENST00000560565 MRPS35P82673 323 aaKnown RBP9.17□□□□□ -0.94
CCDC33-209ENST00000560565 CETN1Q12798 172 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 CALCOCO2Q13137 446 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 MAP2K5Q13163 448 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 TMEM132BQ14DG7 1078 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 TCEAL1Q15170 157 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 NFIL3Q16649 462 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 TSNAXIP1Q2TAA8 658 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 ZCWPW2Q504Y3 356 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 CHRDL2Q6WN34 429 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 ARHGEF18Q6ZSZ5 1173 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 APBB1IPQ7Z5R6 666 aaPredicted RBP9.17□□□□□ -0.94
CCDC33-209ENST00000560565 DAAM2Q86T65 1068 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 NCAPG2Q86XI2 1143 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 RIBC1Q8N443 379 aaPredicted RBP9.17□□□□□ -0.94
CCDC33-209ENST00000560565 LRRC57Q8N9N7 239 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 SHCBP1Q8NEM2 672 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 TPCN2Q8NHX9 752 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 RASGRP4Q8TDF6 673 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 USP6NLQ92738 828 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 HES6Q96HZ4 224 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 MS4A14Q96JA4 679 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 MBOAT7Q96N66 472 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 SERPINB12Q96P63 405 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 MTMR9Q96QG7 549 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 PSMB7Q99436 277 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 ANO3Q9BYT9 981 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 FOXP3Q9BZS1 431 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 UNC93B1Q9H1C4 597 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 TMEM60Q9H2L4 133 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 VCXQ9H320 206 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 MROH8Q9H579 483 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 IGSF5Q9NSI5 407 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 PANK4Q9NVE7 773 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 KLHL14Q9P2G3 628 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 ADAMTS1Q9UHI8 967 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 NAGPAQ9UK23 515 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 CCPG1Q9ULG6 757 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 TRPC6Q9Y210 931 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 TRAF3IP3Q9Y228 551 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 STXBP5LQ9Y2K9 1186 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 MCM3APO60318 1980 aa9.17□□□□□ -0.94
CCDC33-209ENST00000560565 DNAH12Q6ZR08 3092 aa9.16□□□□□ -0.94
CCDC33-209ENST00000560565 ZNF536O15090 1300 aa9.16□□□□□ -0.94
CCDC33-209ENST00000560565 ESYT3A0FGR9 886 aa9.16□□□□□ -0.94
CCDC33-209ENST00000560565 WNT7AO00755 349 aa9.16□□□□□ -0.94
CCDC33-209ENST00000560565 PDXKO00764 312 aa9.16□□□□□ -0.94
CCDC33-209ENST00000560565 ADAMTS3O15072 1205 aa9.16□□□□□ -0.94
CCDC33-209ENST00000560565 SLC25A27O95847 323 aa9.16□□□□□ -0.94
CCDC33-209ENST00000560565 KRT18P05783 430 aaKnown RBP9.16□□□□□ -0.94
CCDC33-209ENST00000560565 VIMP08670 466 aaKnown RBP9.16□□□□□ -0.94
CCDC33-209ENST00000560565 RARGP13631 454 aa9.16□□□□□ -0.94
CCDC33-209ENST00000560565 NQO1P15559 274 aaKnown RBP9.16□□□□□ -0.94
CCDC33-209ENST00000560565 GAP43P17677 238 aa9.16□□□□□ -0.94
CCDC33-209ENST00000560565 ALDH3A1P30838 453 aa9.16□□□□□ -0.94
CCDC33-209ENST00000560565 COPB2P35606 906 aa9.16□□□□□ -0.94
CCDC33-209ENST00000560565 STAT3P40763 770 aa9.16□□□□□ -0.94
CCDC33-209ENST00000560565 SSR1P43307 286 aaKnown RBP9.16□□□□□ -0.94
CCDC33-209ENST00000560565 HSD17B4P51659 736 aa9.16□□□□□ -0.94
CCDC33-209ENST00000560565 COPS2P61201 443 aa9.16□□□□□ -0.94
CCDC33-209ENST00000560565 COASYQ13057 564 aa9.16□□□□□ -0.94
CCDC33-209ENST00000560565 ADAM9Q13443 819 aa9.16□□□□□ -0.94
CCDC33-209ENST00000560565 ACVR2BQ13705 512 aa9.16□□□□□ -0.94
CCDC33-209ENST00000560565 GRB14Q14449 540 aa9.16□□□□□ -0.94
CCDC33-209ENST00000560565 PARP6Q2NL67 630 aa9.16□□□□□ -0.94
CCDC33-209ENST00000560565 USH1GQ495M9 461 aa9.16□□□□□ -0.94
CCDC33-209ENST00000560565 SEL1L2Q5TEA6 688 aa9.16□□□□□ -0.94
CCDC33-209ENST00000560565 CAPRIN2Q6IMN6 1127 aaKnown RBP9.16□□□□□ -0.94
CCDC33-209ENST00000560565 C11orf63Q6NUN7 778 aa9.16□□□□□ -0.94
CCDC33-209ENST00000560565 CCDC174Q6PII3 467 aa9.16□□□□□ -0.94
CCDC33-209ENST00000560565 DPP9Q86TI2 863 aa9.16□□□□□ -0.94
CCDC33-209ENST00000560565 AGGF1Q8N302 714 aaeCLIP9.16□□□□□ -0.94
CCDC33-209ENST00000560565 GRK7Q8WTQ7 553 aa9.16□□□□□ -0.94
CCDC33-209ENST00000560565 CRYGNQ8WXF5 182 aa9.16□□□□□ -0.94
CCDC33-209ENST00000560565 TRIB2Q92519 343 aa9.16□□□□□ -0.94
CCDC33-209ENST00000560565 RPS6KC1Q96S38 1066 aa9.16□□□□□ -0.94
CCDC33-209ENST00000560565 APBA2Q99767 749 aa9.16□□□□□ -0.94
CCDC33-209ENST00000560565 SELENOSQ9BQE4 189 aa9.16□□□□□ -0.94
CCDC33-209ENST00000560565 MKNK1Q9BUB5 465 aa9.16□□□□□ -0.94
CCDC33-209ENST00000560565 RABEP2Q9H5N1 569 aa9.16□□□□□ -0.94
CCDC33-209ENST00000560565 RXFP1Q9HBX9 757 aa9.16□□□□□ -0.94
CCDC33-209ENST00000560565 HMX1Q9NP08 348 aaPredicted RBP9.16□□□□□ -0.94
CCDC33-209ENST00000560565 NLRC4Q9NPP4 1024 aa9.16□□□□□ -0.94
CCDC33-209ENST00000560565 TMEM260Q9NX78 707 aa9.16□□□□□ -0.94
CCDC33-209ENST00000560565 NKIRAS1Q9NYS0 192 aa9.16□□□□□ -0.94
CCDC33-209ENST00000560565 TFR2Q9UP52 801 aa9.16□□□□□ -0.94
CCDC33-209ENST00000560565 RPTORQ8N122 1335 aa9.15□□□□□ -0.94
CCDC33-209ENST00000560565 A0A087X0T9 212 aa9.15□□□□□ -0.94
CCDC33-209ENST00000560565 MYMKA6NI61 221 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms