RNA–Protein interactions for RNA: ENST00000560502.5

LDLR-213, Transcript of low density lipoprotein receptor, humanhuman

TSL 2

Gene LDLR, Length 509 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-213ENST00000560502 CYP4A11Q02928 519 aa15.43■□□□□ 0.06
LDLR-213ENST00000560502 MBTD1Q05BQ5 628 aa15.43■□□□□ 0.06
LDLR-213ENST00000560502 MXD4Q14582 209 aaPredicted RBP15.43■□□□□ 0.06
LDLR-213ENST00000560502 NOTUMQ6P988 496 aa15.43■□□□□ 0.06
LDLR-213ENST00000560502 CYP26C1Q6V0L0 522 aa15.43■□□□□ 0.06
LDLR-213ENST00000560502 SLFN12Q8IYM2 578 aa15.43■□□□□ 0.06
LDLR-213ENST00000560502 ASAP3Q8TDY4 903 aa15.43■□□□□ 0.06
LDLR-213ENST00000560502 ZFP42Q96MM3 310 aa15.43■□□□□ 0.06
LDLR-213ENST00000560502 CLIC6Q96NY7 704 aa15.43■□□□□ 0.06
LDLR-213ENST00000560502 FUCA2Q9BTY2 467 aa15.43■□□□□ 0.06
LDLR-213ENST00000560502 WDR6Q9NNW5 1121 aaKnown RBP15.43■□□□□ 0.06
LDLR-213ENST00000560502 CHST7Q9NS84 486 aa15.43■□□□□ 0.06
LDLR-213ENST00000560502 IGSF9Q9P2J2 1179 aa15.43■□□□□ 0.06
LDLR-213ENST00000560502 HES2Q9Y543 173 aa15.43■□□□□ 0.06
LDLR-213ENST00000560502 ZMYM2Q9UBW7 1377 aa15.43■□□□□ 0.06
LDLR-213ENST00000560502 DOCK6Q96HP0 2047 aa15.43■□□□□ 0.06
LDLR-213ENST00000560502 CLUHO75153 1309 aa15.43■□□□□ 0.06
LDLR-213ENST00000560502 VWA3AA6NCI4 1184 aa15.42■□□□□ 0.06
LDLR-213ENST00000560502 GLUD1P00367 558 aa15.42■□□□□ 0.06
LDLR-213ENST00000560502 C1RP00736 705 aa15.42■□□□□ 0.06
LDLR-213ENST00000560502 OR1G1P47890 313 aa15.42■□□□□ 0.06
LDLR-213ENST00000560502 SCNN1GP51170 649 aa15.42■□□□□ 0.06
LDLR-213ENST00000560502 CAPSQ13938 189 aa15.42■□□□□ 0.06
LDLR-213ENST00000560502 SASS6Q6UVJ0 657 aa15.42■□□□□ 0.06
LDLR-213ENST00000560502 CCDC105Q8IYK2 499 aa15.42■□□□□ 0.06
LDLR-213ENST00000560502 GSTCDQ8NEC7 633 aa15.42■□□□□ 0.06
LDLR-213ENST00000560502 FLCNQ8NFG4 579 aa15.42■□□□□ 0.06
LDLR-213ENST00000560502 HDAC7Q8WUI4 952 aa15.42■□□□□ 0.06
LDLR-213ENST00000560502 ZNF707Q96C28 371 aaPredicted RBP15.42■□□□□ 0.06
LDLR-213ENST00000560502 CPB2Q96IY4 423 aa15.42■□□□□ 0.06
LDLR-213ENST00000560502 HSD17B14Q9BPX1 270 aa15.42■□□□□ 0.06
LDLR-213ENST00000560502 NFKBIZQ9BYH8 718 aa15.42■□□□□ 0.06
LDLR-213ENST00000560502 NXF3Q9H4D5 531 aaKnown RBP15.42■□□□□ 0.06
LDLR-213ENST00000560502 GRPEL1Q9HAV7 217 aa15.42■□□□□ 0.06
LDLR-213ENST00000560502 EPS15L1Q9UBC2 864 aa15.42■□□□□ 0.06
LDLR-213ENST00000560502 GIT1Q9Y2X7 761 aa15.42■□□□□ 0.06
LDLR-213ENST00000560502 CCDC195A0A1B0GUA6 201 aa15.41■□□□□ 0.06
LDLR-213ENST00000560502 INO80B-WBP1J3KQ70 363 aa15.41■□□□□ 0.06
LDLR-213ENST00000560502 PI15O43692 258 aa15.41■□□□□ 0.06
LDLR-213ENST00000560502 NARSO43776 548 aaKnown RBP15.41■□□□□ 0.06
LDLR-213ENST00000560502 RFPL2O75678 378 aa15.41■□□□□ 0.06
LDLR-213ENST00000560502 ARF4P18085 180 aaPredicted RBP15.41■□□□□ 0.06
LDLR-213ENST00000560502 ARL2P36404 184 aa15.41■□□□□ 0.06
LDLR-213ENST00000560502 FXR2P51116 673 aaKnown RBP eCLIP15.41■□□□□ 0.06
LDLR-213ENST00000560502 TFDP1Q14186 410 aa15.41■□□□□ 0.06
LDLR-213ENST00000560502 CALCRLQ16602 461 aa15.41■□□□□ 0.06
LDLR-213ENST00000560502 KRBA2Q6ZNG9 492 aa15.41■□□□□ 0.06
LDLR-213ENST00000560502 FRMD5Q7Z6J6 570 aa15.41■□□□□ 0.06
LDLR-213ENST00000560502 TPH2Q8IWU9 490 aa15.41■□□□□ 0.06
LDLR-213ENST00000560502 GPR65Q8IYL9 337 aa15.41■□□□□ 0.06
LDLR-213ENST00000560502 MTMR9Q96QG7 549 aa15.41■□□□□ 0.06
LDLR-213ENST00000560502 EIF2AK1Q9BQI3 630 aaKnown RBP15.41■□□□□ 0.06
LDLR-213ENST00000560502 CCSER1Q9C0I3 900 aa15.41■□□□□ 0.06
LDLR-213ENST00000560502 MAGEF1Q9HAY2 307 aa15.41■□□□□ 0.06
LDLR-213ENST00000560502 ANKEF1Q9NU02 776 aa15.41■□□□□ 0.06
LDLR-213ENST00000560502 DPP7Q9UHL4 492 aa15.41■□□□□ 0.06
LDLR-213ENST00000560502 ZNF292O60281 2723 aa15.4■□□□□ 0.06
LDLR-213ENST00000560502 MARCH6O60337 910 aa15.4■□□□□ 0.06
LDLR-213ENST00000560502 DGAT1O75907 488 aa15.4■□□□□ 0.06
LDLR-213ENST00000560502 GLRA2P23416 452 aa15.4■□□□□ 0.06
LDLR-213ENST00000560502 GRIN1Q05586 938 aa15.4■□□□□ 0.06
LDLR-213ENST00000560502 TYRO3Q06418 890 aa15.4■□□□□ 0.06
LDLR-213ENST00000560502 CAMK4Q16566 473 aa15.4■□□□□ 0.06
LDLR-213ENST00000560502 ELMSAN1Q6PJG2 1045 aa15.4■□□□□ 0.06
LDLR-213ENST00000560502 GAS2L3Q86XJ1 694 aa15.4■□□□□ 0.06
LDLR-213ENST00000560502 SIX5Q8N196 739 aa15.4■□□□□ 0.06
LDLR-213ENST00000560502 IQUBQ8NA54 791 aa15.4■□□□□ 0.06
LDLR-213ENST00000560502 MYADMQ96S97 322 aa15.4■□□□□ 0.06
LDLR-213ENST00000560502 GPR62Q9BZJ7 368 aa15.4■□□□□ 0.06
LDLR-213ENST00000560502 TMEM60Q9H2L4 133 aa15.4■□□□□ 0.06
LDLR-213ENST00000560502 CUEDC2Q9H467 287 aa15.4■□□□□ 0.06
LDLR-213ENST00000560502 STK24Q9Y6E0 443 aa15.4■□□□□ 0.06
LDLR-213ENST00000560502 EP300Q09472 2414 aaPredicted RBP15.4■□□□□ 0.06
LDLR-213ENST00000560502 VWA8A3KMH1 1905 aa15.4■□□□□ 0.06
LDLR-213ENST00000560502 CACNA1AO00555 2505 aa15.4■□□□□ 0.06
LDLR-213ENST00000560502 FANCMQ8IYD8 2048 aa15.39■□□□□ 0.05
LDLR-213ENST00000560502 B4GALT5O43286 388 aa15.39■□□□□ 0.05
LDLR-213ENST00000560502 SLFN14P0C7P3 912 aa15.39■□□□□ 0.05
LDLR-213ENST00000560502 RARRES1P49788 294 aa15.39■□□□□ 0.05
LDLR-213ENST00000560502 GRIK3Q13003 919 aa15.39■□□□□ 0.05
LDLR-213ENST00000560502 PDIA5Q14554 519 aa15.39■□□□□ 0.05
LDLR-213ENST00000560502 ZRSR1Q15695 479 aaKnown RBP15.39■□□□□ 0.05
LDLR-213ENST00000560502 STX1AQ16623 288 aa15.39■□□□□ 0.05
LDLR-213ENST00000560502 UVSSAQ2YD98 709 aa15.39■□□□□ 0.05
LDLR-213ENST00000560502 FUT10Q6P4F1 479 aa15.39■□□□□ 0.05
LDLR-213ENST00000560502 LILRA6Q6PI73 481 aa15.39■□□□□ 0.05
LDLR-213ENST00000560502 POTEGQ6S5H5 508 aa15.39■□□□□ 0.05
LDLR-213ENST00000560502 CEP57L1Q8IYX8 460 aa15.39■□□□□ 0.05
LDLR-213ENST00000560502 IGSF22Q8N9C0 903 aa15.39■□□□□ 0.05
LDLR-213ENST00000560502 DTWD2Q8NBA8 298 aa15.39■□□□□ 0.05
LDLR-213ENST00000560502 RSAD2Q8WXG1 361 aa15.39■□□□□ 0.05
LDLR-213ENST00000560502 SMG7Q92540 1137 aaKnown RBP15.39■□□□□ 0.05
LDLR-213ENST00000560502 STAMQ92783 540 aa15.39■□□□□ 0.05
LDLR-213ENST00000560502 NKD2Q969F2 451 aaPredicted RBP15.39■□□□□ 0.05
LDLR-213ENST00000560502 B3GALT6Q96L58 329 aa15.39■□□□□ 0.05
LDLR-213ENST00000560502 RTP3Q9BQQ7 232 aa15.39■□□□□ 0.05
LDLR-213ENST00000560502 COLEC11Q9BWP8 271 aa15.39■□□□□ 0.05
LDLR-213ENST00000560502 APOL6Q9BWW8 343 aa15.39■□□□□ 0.05
LDLR-213ENST00000560502 PLEKHA4Q9H4M7 779 aa15.39■□□□□ 0.05
LDLR-213ENST00000560502 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms