RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 SMC2O95347 1197 aa16.91■□□□□ 0.3
LYSMD2-204ENST00000560491 CLTAP09496 248 aa16.91■□□□□ 0.3
LYSMD2-204ENST00000560491 SLC11A1P49279 550 aa16.91■□□□□ 0.3
LYSMD2-204ENST00000560491 GPM6BQ13491 265 aa16.91■□□□□ 0.3
LYSMD2-204ENST00000560491 ADGRE1Q14246 886 aa16.91■□□□□ 0.3
LYSMD2-204ENST00000560491 ENOX2Q16206 610 aaKnown RBP16.91■□□□□ 0.3
LYSMD2-204ENST00000560491 KNOP1Q1ED39 458 aaKnown RBP16.91■□□□□ 0.3
LYSMD2-204ENST00000560491 SLC10A6Q3KNW5 377 aa16.91■□□□□ 0.3
LYSMD2-204ENST00000560491 ARMCX5Q6P1M9 558 aa16.91■□□□□ 0.3
LYSMD2-204ENST00000560491 ALKAL1Q6UXT8 129 aa16.91■□□□□ 0.3
LYSMD2-204ENST00000560491 TMEM173Q86WV6 379 aaPredicted RBP16.91■□□□□ 0.3
LYSMD2-204ENST00000560491 SPATA20Q8TB22 786 aa16.91■□□□□ 0.3
LYSMD2-204ENST00000560491 NOC3LQ8WTT2 800 aaKnown RBP16.91■□□□□ 0.3
LYSMD2-204ENST00000560491 ZMAT2Q96NC0 199 aaKnown RBP16.91■□□□□ 0.3
LYSMD2-204ENST00000560491 PLVAPQ9BX97 442 aa16.91■□□□□ 0.3
LYSMD2-204ENST00000560491 ALG13Q9NP73 1137 aaKnown RBP16.91■□□□□ 0.3
LYSMD2-204ENST00000560491 CPSF3Q9UKF6 684 aaKnown RBP16.91■□□□□ 0.3
LYSMD2-204ENST00000560491 PCDHB12Q9Y5F1 795 aa16.91■□□□□ 0.3
LYSMD2-204ENST00000560491 GOLGA8IPA6NC78 632 aa16.9■□□□□ 0.3
LYSMD2-204ENST00000560491 GOLGA8JA6NMD2 632 aa16.9■□□□□ 0.3
LYSMD2-204ENST00000560491 H3BNC9 293 aa16.9■□□□□ 0.3
LYSMD2-204ENST00000560491 CLIC2O15247 247 aa16.9■□□□□ 0.3
LYSMD2-204ENST00000560491 ITGB1P05556 798 aa16.9■□□□□ 0.3
LYSMD2-204ENST00000560491 RB1P06400 928 aa16.9■□□□□ 0.3
LYSMD2-204ENST00000560491 GALTP07902 379 aa16.9■□□□□ 0.3
LYSMD2-204ENST00000560491 GARTP22102 1010 aa16.9■□□□□ 0.3
LYSMD2-204ENST00000560491 SPAG1Q07617 926 aa16.9■□□□□ 0.3
LYSMD2-204ENST00000560491 DSC1Q08554 894 aa16.9■□□□□ 0.3
LYSMD2-204ENST00000560491 NAB2Q15742 525 aa16.9■□□□□ 0.3
LYSMD2-204ENST00000560491 XKR4Q5GH76 650 aa16.9■□□□□ 0.3
LYSMD2-204ENST00000560491 ISM2Q6H9L7 571 aa16.9■□□□□ 0.3
LYSMD2-204ENST00000560491 CRELD2Q6UXH1 353 aaPredicted RBP16.9■□□□□ 0.3
LYSMD2-204ENST00000560491 COLGALT2Q8IYK4 626 aa16.9■□□□□ 0.3
LYSMD2-204ENST00000560491 GPT2Q8TD30 523 aa16.9■□□□□ 0.3
LYSMD2-204ENST00000560491 BCL7CQ8WUZ0 217 aaPredicted RBP16.9■□□□□ 0.3
LYSMD2-204ENST00000560491 RABGGTAQ92696 567 aa16.9■□□□□ 0.3
LYSMD2-204ENST00000560491 GSDMAQ96QA5 445 aa16.9■□□□□ 0.3
LYSMD2-204ENST00000560491 PPP1R10Q96QC0 940 aaKnown RBP16.9■□□□□ 0.3
LYSMD2-204ENST00000560491 FAM213AQ9BRX8 229 aa16.9■□□□□ 0.3
LYSMD2-204ENST00000560491 C11orf84Q9BUA3 381 aaPredicted RBP16.9■□□□□ 0.3
LYSMD2-204ENST00000560491 RPF1Q9H9Y2 349 aaKnown RBP16.9■□□□□ 0.3
LYSMD2-204ENST00000560491 AGPAT3Q9NRZ7 376 aa16.9■□□□□ 0.3
LYSMD2-204ENST00000560491 RMND1Q9NWS8 449 aa16.9■□□□□ 0.3
LYSMD2-204ENST00000560491 CNTN3Q9P232 1028 aa16.9■□□□□ 0.3
LYSMD2-204ENST00000560491 MAN1B1Q9UKM7 699 aa16.9■□□□□ 0.3
LYSMD2-204ENST00000560491 PRG3Q9Y2Y8 225 aaPredicted RBP16.9■□□□□ 0.3
LYSMD2-204ENST00000560491 SMIM28A0A1B0GU29 152 aa16.89■□□□□ 0.29
LYSMD2-204ENST00000560491 CASTOR2A6NHX0 329 aa16.89■□□□□ 0.29
LYSMD2-204ENST00000560491 F8W810 466 aa16.89■□□□□ 0.29
LYSMD2-204ENST00000560491 GRM6O15303 877 aa16.89■□□□□ 0.29
LYSMD2-204ENST00000560491 FGF18O76093 207 aa16.89■□□□□ 0.29
LYSMD2-204ENST00000560491 THP07101 528 aa16.89■□□□□ 0.29
LYSMD2-204ENST00000560491 OR1G1P47890 313 aa16.89■□□□□ 0.29
LYSMD2-204ENST00000560491 ALDH7A1P49419 539 aaKnown RBP16.89■□□□□ 0.29
LYSMD2-204ENST00000560491 PPP2R3AQ06190 1150 aa16.89■□□□□ 0.29
LYSMD2-204ENST00000560491 KYAT1Q16773 422 aa16.89■□□□□ 0.29
LYSMD2-204ENST00000560491 SLC39A11Q8N1S5 342 aa16.89■□□□□ 0.29
LYSMD2-204ENST00000560491 TMEM130Q8N3G9 435 aa16.89■□□□□ 0.29
LYSMD2-204ENST00000560491 P2RX5Q93086 422 aa16.89■□□□□ 0.29
LYSMD2-204ENST00000560491 FAM212AQ96EL1 285 aa16.89■□□□□ 0.29
LYSMD2-204ENST00000560491 KCTD10Q9H3F6 313 aa16.89■□□□□ 0.29
LYSMD2-204ENST00000560491 CLSTN2Q9H4D0 955 aa16.89■□□□□ 0.29
LYSMD2-204ENST00000560491 TTC26A0AVF1 554 aa16.88■□□□□ 0.29
LYSMD2-204ENST00000560491 LACTBL1A8MY62 500 aa16.88■□□□□ 0.29
LYSMD2-204ENST00000560491 BIN1O00499 593 aa16.88■□□□□ 0.29
LYSMD2-204ENST00000560491 NRP1O14786 923 aa16.88■□□□□ 0.29
LYSMD2-204ENST00000560491 KCNE1P15382 129 aa16.88■□□□□ 0.29
LYSMD2-204ENST00000560491 FOSL2P15408 326 aa16.88■□□□□ 0.29
LYSMD2-204ENST00000560491 IGFBP4P22692 258 aa16.88■□□□□ 0.29
LYSMD2-204ENST00000560491 DNAJB1P25685 340 aa16.88■□□□□ 0.29
LYSMD2-204ENST00000560491 CYP2J2P51589 502 aa16.88■□□□□ 0.29
LYSMD2-204ENST00000560491 WNT7BP56706 349 aa16.88■□□□□ 0.29
LYSMD2-204ENST00000560491 SOX4Q06945 474 aaPredicted RBP16.88■□□□□ 0.29
LYSMD2-204ENST00000560491 TUSC3Q13454 348 aa16.88■□□□□ 0.29
LYSMD2-204ENST00000560491 ZNF658Q5TYW1 1059 aaPredicted RBP16.88■□□□□ 0.29
LYSMD2-204ENST00000560491 HS2ST1Q7LGA3 356 aa16.88■□□□□ 0.29
LYSMD2-204ENST00000560491 C18orf25Q96B23 403 aaPredicted RBP16.88■□□□□ 0.29
LYSMD2-204ENST00000560491 GAS2L1Q99501 681 aaPredicted RBP16.88■□□□□ 0.29
LYSMD2-204ENST00000560491 PAAF1Q9BRP4 392 aa16.88■□□□□ 0.29
LYSMD2-204ENST00000560491 TMEM175Q9BSA9 504 aa16.88■□□□□ 0.29
LYSMD2-204ENST00000560491 GOLGA2P5Q9HBQ8 144 aa16.88■□□□□ 0.29
LYSMD2-204ENST00000560491 MARCH5Q9NX47 278 aa16.88■□□□□ 0.29
LYSMD2-204ENST00000560491 SPG21Q9NZD8 308 aa16.88■□□□□ 0.29
LYSMD2-204ENST00000560491 HSPBP1Q9NZL4 362 aa16.88■□□□□ 0.29
LYSMD2-204ENST00000560491 TULP1O00294 542 aaPredicted RBP16.87■□□□□ 0.29
LYSMD2-204ENST00000560491 EXTL3O43909 919 aa16.87■□□□□ 0.29
LYSMD2-204ENST00000560491 PPM1AP35813 382 aa16.87■□□□□ 0.29
LYSMD2-204ENST00000560491 GPD1LQ8N335 351 aa16.87■□□□□ 0.29
LYSMD2-204ENST00000560491 GUF1Q8N442 669 aaKnown RBP16.87■□□□□ 0.29
LYSMD2-204ENST00000560491 SPPL3Q8TCT6 385 aa16.87■□□□□ 0.29
LYSMD2-204ENST00000560491 POF1BQ8WVV4 589 aa16.87■□□□□ 0.29
LYSMD2-204ENST00000560491 IGSF21Q96ID5 467 aa16.87■□□□□ 0.29
LYSMD2-204ENST00000560491 NUP62CLQ9H1M0 184 aa16.87■□□□□ 0.29
LYSMD2-204ENST00000560491 PLEKHA5Q9HAU0 1116 aa16.87■□□□□ 0.29
LYSMD2-204ENST00000560491 TUBGCP4Q9UGJ1 667 aa16.87■□□□□ 0.29
LYSMD2-204ENST00000560491 FAN1Q9Y2M0 1017 aa16.87■□□□□ 0.29
LYSMD2-204ENST00000560491 KIF20AO95235 890 aa16.86■□□□□ 0.29
LYSMD2-204ENST00000560491 LDHAP00338 332 aaKnown RBP16.86■□□□□ 0.29
LYSMD2-204ENST00000560491 ALDH2P05091 517 aa16.86■□□□□ 0.29
LYSMD2-204ENST00000560491 ADRB2P07550 413 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms