RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 RPS6KA5O75582 802 aa9.32□□□□□ -0.92
TRAF3-209ENST00000560463 NOL4O94818 638 aa9.32□□□□□ -0.92
TRAF3-209ENST00000560463 SGPL1O95470 568 aa9.32□□□□□ -0.92
TRAF3-209ENST00000560463 STAG3L1P0CL83 205 aa9.32□□□□□ -0.92
TRAF3-209ENST00000560463 DLATP10515 647 aaKnown RBP9.32□□□□□ -0.92
TRAF3-209ENST00000560463 HARSP12081 509 aaKnown RBP9.32□□□□□ -0.92
TRAF3-209ENST00000560463 SKILP12757 684 aa9.32□□□□□ -0.92
TRAF3-209ENST00000560463 UCHL3P15374 230 aa9.32□□□□□ -0.92
TRAF3-209ENST00000560463 HOXA11P31270 313 aaPredicted RBP9.32□□□□□ -0.92
TRAF3-209ENST00000560463 HNRNPH3P31942 346 aaKnown RBP9.32□□□□□ -0.92
TRAF3-209ENST00000560463 THPOP40225 353 aa9.32□□□□□ -0.92
TRAF3-209ENST00000560463 TNFSF9P41273 254 aa9.32□□□□□ -0.92
TRAF3-209ENST00000560463 GRM5P41594 1212 aa9.32□□□□□ -0.92
TRAF3-209ENST00000560463 GCLMP48507 274 aa9.32□□□□□ -0.92
TRAF3-209ENST00000560463 CDK7P50613 346 aa9.32□□□□□ -0.92
TRAF3-209ENST00000560463 CCZ1BP86790 482 aa9.32□□□□□ -0.92
TRAF3-209ENST00000560463 CCZ1P86791 482 aaPredicted RBP9.32□□□□□ -0.92
TRAF3-209ENST00000560463 CDK17Q00537 523 aa9.32□□□□□ -0.92
TRAF3-209ENST00000560463 ZACNQ401N2 412 aa9.32□□□□□ -0.92
TRAF3-209ENST00000560463 DPY19L2P1Q6NXN4 242 aa9.32□□□□□ -0.92
TRAF3-209ENST00000560463 CYP26C1Q6V0L0 522 aa9.32□□□□□ -0.92
TRAF3-209ENST00000560463 TMTC1Q8IUR5 882 aa9.32□□□□□ -0.92
TRAF3-209ENST00000560463 THNSL1Q8IYQ7 743 aa9.32□□□□□ -0.92
TRAF3-209ENST00000560463 LMO3Q8TAP4 145 aa9.32□□□□□ -0.92
TRAF3-209ENST00000560463 CAGE1Q8TC20 777 aa9.32□□□□□ -0.92
TRAF3-209ENST00000560463 TMEM40Q8WWA1 233 aa9.32□□□□□ -0.92
TRAF3-209ENST00000560463 ARMC5Q96C12 935 aa9.32□□□□□ -0.92
TRAF3-209ENST00000560463 ACAP3Q96P50 834 aa9.32□□□□□ -0.92
TRAF3-209ENST00000560463 CCDC94Q9BW85 323 aaPredicted RBP9.32□□□□□ -0.92
TRAF3-209ENST00000560463 CRISPLD2Q9H0B8 497 aa9.32□□□□□ -0.92
TRAF3-209ENST00000560463 GANQ9H2C0 597 aa9.32□□□□□ -0.92
TRAF3-209ENST00000560463 ASB7Q9H672 318 aa9.32□□□□□ -0.92
TRAF3-209ENST00000560463 PLEKHA5Q9HAU0 1116 aa9.32□□□□□ -0.92
TRAF3-209ENST00000560463 PDE11AQ9HCR9 933 aa9.32□□□□□ -0.92
TRAF3-209ENST00000560463 APEX2Q9UBZ4 518 aa9.32□□□□□ -0.92
TRAF3-209ENST00000560463 PLAGL2Q9UPG8 496 aa9.32□□□□□ -0.92
TRAF3-209ENST00000560463 LTBP2Q14767 1821 aa9.32□□□□□ -0.92
TRAF3-209ENST00000560463 RNF225M0QZC1 329 aaPredicted RBP9.31□□□□□ -0.92
TRAF3-209ENST00000560463 TLR3O15455 904 aaKnown RBP9.31□□□□□ -0.92
TRAF3-209ENST00000560463 CHRNA1P02708 482 aa9.31□□□□□ -0.92
TRAF3-209ENST00000560463 C4BPAP04003 597 aaKnown RBP9.31□□□□□ -0.92
TRAF3-209ENST00000560463 POLR2FP61218 127 aaKnown RBP9.31□□□□□ -0.92
TRAF3-209ENST00000560463 LRMPQ12912 555 aa9.31□□□□□ -0.92
TRAF3-209ENST00000560463 ENOX2Q16206 610 aaKnown RBP9.31□□□□□ -0.92
TRAF3-209ENST00000560463 MEA1Q16626 185 aa9.31□□□□□ -0.92
TRAF3-209ENST00000560463 DUOXA2Q1HG44 320 aa9.31□□□□□ -0.92
TRAF3-209ENST00000560463 TRIM71Q2Q1W2 868 aaKnown RBP9.31□□□□□ -0.92
TRAF3-209ENST00000560463 FBXO47Q5MNV8 452 aa9.31□□□□□ -0.92
TRAF3-209ENST00000560463 ZBTB41Q5SVQ8 909 aa9.31□□□□□ -0.92
TRAF3-209ENST00000560463 C1orf53Q5VUE5 145 aa9.31□□□□□ -0.92
TRAF3-209ENST00000560463 PDXDC1Q6P996 788 aa9.31□□□□□ -0.92
TRAF3-209ENST00000560463 SV2AQ7L0J3 742 aa9.31□□□□□ -0.92
TRAF3-209ENST00000560463 FAM228AQ86W67 206 aa9.31□□□□□ -0.92
TRAF3-209ENST00000560463 CDR2LQ86X02 465 aaPredicted RBP9.31□□□□□ -0.92
TRAF3-209ENST00000560463 TMEM139Q8IV31 216 aa9.31□□□□□ -0.92
TRAF3-209ENST00000560463 BAP1Q92560 729 aa9.31□□□□□ -0.92
TRAF3-209ENST00000560463 ANKRD36BP1Q96IX9 119 aa9.31□□□□□ -0.92
TRAF3-209ENST00000560463 ZNF830Q96NB3 372 aaPredicted RBP9.31□□□□□ -0.92
TRAF3-209ENST00000560463 POP1Q99575 1024 aaKnown RBP9.31□□□□□ -0.92
TRAF3-209ENST00000560463 TRIM6Q9C030 488 aaPredicted RBP9.31□□□□□ -0.92
TRAF3-209ENST00000560463 INTS2Q9H0H0 1204 aaKnown RBP9.31□□□□□ -0.92
TRAF3-209ENST00000560463 SIX2Q9NPC8 291 aa9.31□□□□□ -0.92
TRAF3-209ENST00000560463 TOPORSQ9NS56 1045 aaPredicted RBP9.31□□□□□ -0.92
TRAF3-209ENST00000560463 TRMT13Q9NUP7 481 aaKnown RBP9.31□□□□□ -0.92
TRAF3-209ENST00000560463 RAB20Q9NX57 234 aa9.31□□□□□ -0.92
TRAF3-209ENST00000560463 ST3GAL5Q9UNP4 418 aa9.31□□□□□ -0.92
TRAF3-209ENST00000560463 PIN4Q9Y237 131 aaKnown RBP9.31□□□□□ -0.92
TRAF3-209ENST00000560463 DERAQ9Y315 318 aa9.31□□□□□ -0.92
TRAF3-209ENST00000560463 NOC2LQ9Y3T9 749 aaKnown RBP9.31□□□□□ -0.92
TRAF3-209ENST00000560463 ESPNB1AK53 854 aa9.3□□□□□ -0.92
TRAF3-209ENST00000560463 CCP110O43303 1012 aa9.3□□□□□ -0.92
TRAF3-209ENST00000560463 NPTXRO95502 500 aa9.3□□□□□ -0.92
TRAF3-209ENST00000560463 CD4P01730 458 aa9.3□□□□□ -0.92
TRAF3-209ENST00000560463 TNNC2P02585 160 aa9.3□□□□□ -0.92
TRAF3-209ENST00000560463 TFRCP02786 760 aaKnown RBP9.3□□□□□ -0.92
TRAF3-209ENST00000560463 CTSHP09668 335 aa9.3□□□□□ -0.92
TRAF3-209ENST00000560463 CCDC172P0C7W6 258 aa9.3□□□□□ -0.92
TRAF3-209ENST00000560463 HSPA1AP0DMV8 641 aaKnown RBP9.3□□□□□ -0.92
TRAF3-209ENST00000560463 HSPA1BP0DMV9 641 aaKnown RBP9.3□□□□□ -0.92
TRAF3-209ENST00000560463 CKBP12277 381 aa9.3□□□□□ -0.92
TRAF3-209ENST00000560463 ZSCAN20P17040 1043 aaPredicted RBP9.3□□□□□ -0.92
TRAF3-209ENST00000560463 FGFR4P22455 802 aa9.3□□□□□ -0.92
TRAF3-209ENST00000560463 LBX1P52954 281 aa9.3□□□□□ -0.92
TRAF3-209ENST00000560463 YARSP54577 528 aaKnown RBP9.3□□□□□ -0.92
TRAF3-209ENST00000560463 OSTNP61366 133 aa9.3□□□□□ -0.92
TRAF3-209ENST00000560463 BFSP2Q13515 415 aa9.3□□□□□ -0.92
TRAF3-209ENST00000560463 SEZ6Q53EL9 994 aa9.3□□□□□ -0.92
TRAF3-209ENST00000560463 WDR44Q5JSH3 913 aa9.3□□□□□ -0.92
TRAF3-209ENST00000560463 SFMBT2Q5VUG0 894 aa9.3□□□□□ -0.92
TRAF3-209ENST00000560463 WDR59Q6PJI9 974 aa9.3□□□□□ -0.92
TRAF3-209ENST00000560463 RRAGAQ7L523 313 aa9.3□□□□□ -0.92
TRAF3-209ENST00000560463 ENOSF1Q7L5Y1 443 aa9.3□□□□□ -0.92
TRAF3-209ENST00000560463 FAM126BQ8IXS8 530 aa9.3□□□□□ -0.92
TRAF3-209ENST00000560463 CCDC170Q8IYT3 715 aa9.3□□□□□ -0.92
TRAF3-209ENST00000560463 HACE1Q8IYU2 909 aa9.3□□□□□ -0.92
TRAF3-209ENST00000560463 CEP120Q8N960 986 aa9.3□□□□□ -0.92
TRAF3-209ENST00000560463 KIAA1524Q8TCG1 905 aa9.3□□□□□ -0.92
TRAF3-209ENST00000560463 U2AF1L4Q8WU68 220 aaKnown RBP9.3□□□□□ -0.92
TRAF3-209ENST00000560463 ZNF516Q92618 1163 aa9.3□□□□□ -0.92
TRAF3-209ENST00000560463 DHX38Q92620 1227 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms