RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 ADCY1Q08828 1119 aa18.44■□□□□ 0.54
HERC1-207ENST00000560316 TUSC3Q13454 348 aa18.44■□□□□ 0.54
HERC1-207ENST00000560316 CAPSQ13938 189 aa18.44■□□□□ 0.54
HERC1-207ENST00000560316 TFDP1Q14186 410 aa18.44■□□□□ 0.54
HERC1-207ENST00000560316 EPHA7Q15375 998 aa18.44■□□□□ 0.54
HERC1-207ENST00000560316 PPM1JQ5JR12 505 aa18.44■□□□□ 0.54
HERC1-207ENST00000560316 SLC27A1Q6PCB7 646 aa18.44■□□□□ 0.54
HERC1-207ENST00000560316 BLOC1S2Q6QNY1 142 aa18.44■□□□□ 0.54
HERC1-207ENST00000560316 POTEHQ6S545 545 aa18.44■□□□□ 0.54
HERC1-207ENST00000560316 CHAMP1Q96JM3 812 aa18.44■□□□□ 0.54
HERC1-207ENST00000560316 FAM20AQ96MK3 541 aa18.44■□□□□ 0.54
HERC1-207ENST00000560316 AIFM3Q96NN9 605 aa18.44■□□□□ 0.54
HERC1-207ENST00000560316 KCNH3Q9ULD8 1083 aa18.44■□□□□ 0.54
HERC1-207ENST00000560316 ECI2O75521 394 aa18.43■□□□□ 0.54
HERC1-207ENST00000560316 TDGF1P13385 188 aa18.43■□□□□ 0.54
HERC1-207ENST00000560316 PDIA3P30101 505 aaKnown RBP18.43■□□□□ 0.54
HERC1-207ENST00000560316 NCAPH2Q6IBW4 605 aa18.43■□□□□ 0.54
HERC1-207ENST00000560316 DAGLBQ8NCG7 672 aa18.43■□□□□ 0.54
HERC1-207ENST00000560316 HAS1Q92839 578 aa18.43■□□□□ 0.54
HERC1-207ENST00000560316 FAM126AQ9BYI3 521 aaPredicted RBP18.43■□□□□ 0.54
HERC1-207ENST00000560316 RAB23Q9ULC3 237 aa18.43■□□□□ 0.54
HERC1-207ENST00000560316 NDRG2Q9UN36 371 aaKnown RBP18.43■□□□□ 0.54
HERC1-207ENST00000560316 MRPS17Q9Y2R5 130 aaKnown RBP18.43■□□□□ 0.54
HERC1-207ENST00000560316 MRPS23Q9Y3D9 190 aaKnown RBP18.43■□□□□ 0.54
HERC1-207ENST00000560316 USP24Q9UPU5 2620 aa18.43■□□□□ 0.54
HERC1-207ENST00000560316 ARID2Q68CP9 1835 aa18.42■□□□□ 0.54
HERC1-207ENST00000560316 POU2F2P09086 479 aa18.42■□□□□ 0.54
HERC1-207ENST00000560316 OR1D2P34982 312 aa18.42■□□□□ 0.54
HERC1-207ENST00000560316 POU5F1BQ06416 359 aa18.42■□□□□ 0.54
HERC1-207ENST00000560316 SSRP1Q08945 709 aaKnown RBP18.42■□□□□ 0.54
HERC1-207ENST00000560316 SLC5A9Q2M3M2 681 aa18.42■□□□□ 0.54
HERC1-207ENST00000560316 TANGO2Q6ICL3 276 aa18.42■□□□□ 0.54
HERC1-207ENST00000560316 SKAP1Q86WV1 359 aa18.42■□□□□ 0.54
HERC1-207ENST00000560316 TPH2Q8IWU9 490 aa18.42■□□□□ 0.54
HERC1-207ENST00000560316 TRIM22Q8IYM9 498 aa18.42■□□□□ 0.54
HERC1-207ENST00000560316 AGXT2Q9BYV1 514 aa18.42■□□□□ 0.54
HERC1-207ENST00000560316 CXCL16Q9H2A7 254 aa18.42■□□□□ 0.54
HERC1-207ENST00000560316 ZSWIM4Q9H7M6 989 aa18.42■□□□□ 0.54
HERC1-207ENST00000560316 ZMYM2Q9UBW7 1377 aa18.42■□□□□ 0.54
HERC1-207ENST00000560316 CHD6Q8TD26 2715 aa18.41■□□□□ 0.54
HERC1-207ENST00000560316 A0A1B0GUA9 196 aa18.41■□□□□ 0.54
HERC1-207ENST00000560316 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.41■□□□□ 0.54
HERC1-207ENST00000560316 PTGESO14684 152 aa18.41■□□□□ 0.54
HERC1-207ENST00000560316 SLC30A4O14863 429 aa18.41■□□□□ 0.54
HERC1-207ENST00000560316 GLRA2P23416 452 aa18.41■□□□□ 0.54
HERC1-207ENST00000560316 RPS6KB1P23443 525 aa18.41■□□□□ 0.54
HERC1-207ENST00000560316 RAB33AQ14088 237 aa18.41■□□□□ 0.54
HERC1-207ENST00000560316 UVSSAQ2YD98 709 aa18.41■□□□□ 0.54
HERC1-207ENST00000560316 LAIR1Q6GTX8 287 aa18.41■□□□□ 0.54
HERC1-207ENST00000560316 PRR23BQ6ZRT6 265 aa18.41■□□□□ 0.54
HERC1-207ENST00000560316 KRT25Q7Z3Z0 450 aa18.41■□□□□ 0.54
HERC1-207ENST00000560316 ZNF687Q8N1G0 1237 aa18.41■□□□□ 0.54
HERC1-207ENST00000560316 FBXL16Q8N461 479 aa18.41■□□□□ 0.54
HERC1-207ENST00000560316 NETO1Q8TDF5 533 aa18.41■□□□□ 0.54
HERC1-207ENST00000560316 KCNB2Q92953 911 aa18.41■□□□□ 0.54
HERC1-207ENST00000560316 SNX14Q9Y5W7 946 aa18.41■□□□□ 0.54
HERC1-207ENST00000560316 RHOP08100 348 aa18.4■□□□□ 0.54
HERC1-207ENST00000560316 CEBPBP17676 345 aa18.4■□□□□ 0.54
HERC1-207ENST00000560316 IGFBP6P24592 240 aaPredicted RBP18.4■□□□□ 0.54
HERC1-207ENST00000560316 ARL2P36404 184 aa18.4■□□□□ 0.54
HERC1-207ENST00000560316 NRLP54845 237 aa18.4■□□□□ 0.54
HERC1-207ENST00000560316 GRM2Q14416 872 aa18.4■□□□□ 0.54
HERC1-207ENST00000560316 BMP2KLQ5H9B9 411 aa18.4■□□□□ 0.54
HERC1-207ENST00000560316 CHRDQ9H2X0 955 aa18.4■□□□□ 0.54
HERC1-207ENST00000560316 GDE1Q9NZC3 331 aa18.4■□□□□ 0.54
HERC1-207ENST00000560316 KCNJ14Q9UNX9 436 aa18.4■□□□□ 0.54
HERC1-207ENST00000560316 VWA8A3KMH1 1905 aa18.4■□□□□ 0.54
HERC1-207ENST00000560316 MARCH6O60337 910 aa18.39■□□□□ 0.53
HERC1-207ENST00000560316 CCNT1O60563 726 aaKnown RBP18.39■□□□□ 0.53
HERC1-207ENST00000560316 SLITRK3O94933 977 aa18.39■□□□□ 0.53
HERC1-207ENST00000560316 DEXIO95424 95 aa18.39■□□□□ 0.53
HERC1-207ENST00000560316 THP07101 528 aa18.39■□□□□ 0.53
HERC1-207ENST00000560316 KCNA4P22459 653 aa18.39■□□□□ 0.53
HERC1-207ENST00000560316 SPIRE1Q08AE8 756 aa18.39■□□□□ 0.53
HERC1-207ENST00000560316 ELAVL2Q12926 359 aaKnown RBP18.39■□□□□ 0.53
HERC1-207ENST00000560316 PPP4R3AQ6IN85 833 aa18.39■□□□□ 0.53
HERC1-207ENST00000560316 PDXDC1Q6P996 788 aa18.39■□□□□ 0.53
HERC1-207ENST00000560316 NEK8Q86SG6 692 aa18.39■□□□□ 0.53
HERC1-207ENST00000560316 CELF5Q8N6W0 485 aaKnown RBP18.39■□□□□ 0.53
HERC1-207ENST00000560316 ELSPBP1Q96BH3 223 aa18.39■□□□□ 0.53
HERC1-207ENST00000560316 NFKBIZQ9BYH8 718 aa18.39■□□□□ 0.53
HERC1-207ENST00000560316 SEMA4GQ9NTN9 838 aa18.39■□□□□ 0.53
HERC1-207ENST00000560316 SNTG2Q9NY99 539 aa18.39■□□□□ 0.53
HERC1-207ENST00000560316 RALYQ9UKM9 306 aaKnown RBP18.39■□□□□ 0.53
HERC1-207ENST00000560316 CDY1Q9Y6F8 540 aa18.39■□□□□ 0.53
HERC1-207ENST00000560316 F5P12259 2224 aa18.38■□□□□ 0.53
HERC1-207ENST00000560316 CCDC194A0A1B0GVG4 234 aa18.38■□□□□ 0.53
HERC1-207ENST00000560316 NRG2O14511 850 aaPredicted RBP18.38■□□□□ 0.53
HERC1-207ENST00000560316 GDF9O60383 454 aa18.38■□□□□ 0.53
HERC1-207ENST00000560316 DGAT1O75907 488 aa18.38■□□□□ 0.53
HERC1-207ENST00000560316 RETP07949 1114 aa18.38■□□□□ 0.53
HERC1-207ENST00000560316 FCARP24071 287 aa18.38■□□□□ 0.53
HERC1-207ENST00000560316 EVCP57679 992 aa18.38■□□□□ 0.53
HERC1-207ENST00000560316 NAB2Q15742 525 aa18.38■□□□□ 0.53
HERC1-207ENST00000560316 GALNT17Q6IS24 598 aa18.38■□□□□ 0.53
HERC1-207ENST00000560316 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.38■□□□□ 0.53
HERC1-207ENST00000560316 DNASE1L2Q92874 299 aa18.38■□□□□ 0.53
HERC1-207ENST00000560316 POLR3FQ9H1D9 316 aaPredicted RBP18.38■□□□□ 0.53
HERC1-207ENST00000560316 BRD9Q9H8M2 597 aa18.38■□□□□ 0.53
HERC1-207ENST00000560316 MTRRQ9UBK8 725 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms