RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 PDXDC1Q6P996 788 aa19.17■□□□□ 0.66
CRTC3-208ENST00000560098 FRMD5Q7Z6J6 570 aa19.17■□□□□ 0.66
CRTC3-208ENST00000560098 FBXO18Q8NFZ0 1043 aa19.17■□□□□ 0.66
CRTC3-208ENST00000560098 IFT74Q96LB3 600 aa19.17■□□□□ 0.66
CRTC3-208ENST00000560098 KIFC3Q9BVG8 833 aa19.17■□□□□ 0.66
CRTC3-208ENST00000560098 CA14Q9ULX7 337 aa19.17■□□□□ 0.66
CRTC3-208ENST00000560098 GDAQ9Y2T3 454 aa19.17■□□□□ 0.66
CRTC3-208ENST00000560098 ANHXE9PGG2 379 aa19.17■□□□□ 0.66
CRTC3-208ENST00000560098 HNRNPA1P09651 372 aaKnown RBP eCLIP19.17■□□□□ 0.66
CRTC3-208ENST00000560098 FSHRP23945 695 aa19.17■□□□□ 0.66
CRTC3-208ENST00000560098 CCT6AP40227 531 aaKnown RBP19.17■□□□□ 0.66
CRTC3-208ENST00000560098 TRAPPC10P48553 1259 aa19.17■□□□□ 0.66
CRTC3-208ENST00000560098 FXR2P51116 673 aaKnown RBP eCLIP19.17■□□□□ 0.66
CRTC3-208ENST00000560098 HTR4Q13639 388 aa19.17■□□□□ 0.66
CRTC3-208ENST00000560098 GNL2Q13823 731 aaKnown RBP19.17■□□□□ 0.66
CRTC3-208ENST00000560098 ANGPT1Q15389 498 aa19.17■□□□□ 0.66
CRTC3-208ENST00000560098 GRASPQ7Z6J2 395 aaPredicted RBP19.17■□□□□ 0.66
CRTC3-208ENST00000560098 KIFAP3Q92845 792 aa19.17■□□□□ 0.66
CRTC3-208ENST00000560098 BHMT2Q9H2M3 363 aa19.17■□□□□ 0.66
CRTC3-208ENST00000560098 POLD4Q9HCU8 107 aa19.17■□□□□ 0.66
CRTC3-208ENST00000560098 ZFP37Q9Y6Q3 630 aaPredicted RBP19.17■□□□□ 0.66
CRTC3-208ENST00000560098 MTCL1Q9Y4B5 1905 aaKnown RBP19.16■□□□□ 0.66
CRTC3-208ENST00000560098 C8AP07357 584 aa19.16■□□□□ 0.66
CRTC3-208ENST00000560098 RFX1P22670 979 aa19.16■□□□□ 0.66
CRTC3-208ENST00000560098 HMGN5P82970 282 aaKnown RBP19.16■□□□□ 0.66
CRTC3-208ENST00000560098 PPM1LQ5SGD2 360 aa19.16■□□□□ 0.66
CRTC3-208ENST00000560098 NT5DC1Q5TFE4 455 aa19.16■□□□□ 0.66
CRTC3-208ENST00000560098 ATF7IP2Q5U623 682 aa19.16■□□□□ 0.66
CRTC3-208ENST00000560098 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.16■□□□□ 0.66
CRTC3-208ENST00000560098 C4orf32Q8N8J7 132 aa19.16■□□□□ 0.66
CRTC3-208ENST00000560098 GPR152Q8TDT2 470 aa19.16■□□□□ 0.66
CRTC3-208ENST00000560098 NKD2Q969F2 451 aaPredicted RBP19.16■□□□□ 0.66
CRTC3-208ENST00000560098 LRWD1Q9UFC0 647 aa19.16■□□□□ 0.66
CRTC3-208ENST00000560098 NOL7Q9UMY1 257 aaKnown RBP19.16■□□□□ 0.66
CRTC3-208ENST00000560098 KIAA1024Q9UPX6 916 aa19.16■□□□□ 0.66
CRTC3-208ENST00000560098 NUMBLQ9Y6R0 609 aa19.16■□□□□ 0.66
CRTC3-208ENST00000560098 TMEM189-UBE2V1I3L0A0 370 aa19.15■□□□□ 0.66
CRTC3-208ENST00000560098 ADAM12O43184 909 aa19.15■□□□□ 0.66
CRTC3-208ENST00000560098 HOXA9P31269 272 aa19.15■□□□□ 0.66
CRTC3-208ENST00000560098 ERICH6BQ5W0A0 696 aa19.15■□□□□ 0.66
CRTC3-208ENST00000560098 APBB1IPQ7Z5R6 666 aaPredicted RBP19.15■□□□□ 0.66
CRTC3-208ENST00000560098 TBC1D17Q9HA65 648 aa19.15■□□□□ 0.66
CRTC3-208ENST00000560098 K7ERI5 159 aa19.14■□□□□ 0.65
CRTC3-208ENST00000560098 B3GAT3O94766 335 aa19.14■□□□□ 0.65
CRTC3-208ENST00000560098 NTHL1P78549 312 aa19.14■□□□□ 0.65
CRTC3-208ENST00000560098 RAB33AQ14088 237 aa19.14■□□□□ 0.65
CRTC3-208ENST00000560098 PDIA5Q14554 519 aa19.14■□□□□ 0.65
CRTC3-208ENST00000560098 NBR1Q14596 966 aa19.14■□□□□ 0.65
CRTC3-208ENST00000560098 GLRA4Q5JXX5 417 aa19.14■□□□□ 0.65
CRTC3-208ENST00000560098 DCLRE1AQ6PJP8 1040 aa19.14■□□□□ 0.65
CRTC3-208ENST00000560098 FAM184AQ8NB25 1140 aa19.14■□□□□ 0.65
CRTC3-208ENST00000560098 ST13P5Q8NFI4 369 aaPredicted RBP19.14■□□□□ 0.65
CRTC3-208ENST00000560098 PPP1R10Q96QC0 940 aaKnown RBP19.14■□□□□ 0.65
CRTC3-208ENST00000560098 ARHGEF3Q9NR81 526 aa19.14■□□□□ 0.65
CRTC3-208ENST00000560098 SLC2A4RGQ9NR83 387 aa19.14■□□□□ 0.65
CRTC3-208ENST00000560098 DDX19AQ9NUU7 478 aaKnown RBP19.14■□□□□ 0.65
CRTC3-208ENST00000560098 CDH7Q9ULB5 785 aa19.14■□□□□ 0.65
CRTC3-208ENST00000560098 TNFSF13BQ9Y275 285 aa19.14■□□□□ 0.65
CRTC3-208ENST00000560098 STK24Q9Y6E0 443 aa19.14■□□□□ 0.65
CRTC3-208ENST00000560098 DOCK8Q8NF50 2099 aa19.13■□□□□ 0.65
CRTC3-208ENST00000560098 CCL16O15467 120 aa19.13■□□□□ 0.65
CRTC3-208ENST00000560098 XYLBO75191 536 aa19.13■□□□□ 0.65
CRTC3-208ENST00000560098 FGFR3P22607 806 aa19.13■□□□□ 0.65
CRTC3-208ENST00000560098 OR1D2P34982 312 aa19.13■□□□□ 0.65
CRTC3-208ENST00000560098 CLCNKBP51801 687 aa19.13■□□□□ 0.65
CRTC3-208ENST00000560098 AXDND1Q5T1B0 1012 aaPredicted RBP19.13■□□□□ 0.65
CRTC3-208ENST00000560098 PHLDB3Q6NSJ2 640 aa19.13■□□□□ 0.65
CRTC3-208ENST00000560098 SLC7A14Q8TBB6 771 aa19.13■□□□□ 0.65
CRTC3-208ENST00000560098 ZSCAN31Q96LW9 406 aaPredicted RBP19.13■□□□□ 0.65
CRTC3-208ENST00000560098 UROC1Q96N76 676 aa19.13■□□□□ 0.65
CRTC3-208ENST00000560098 RAB34Q9BZG1 259 aa19.13■□□□□ 0.65
CRTC3-208ENST00000560098 MTRRQ9UBK8 725 aa19.13■□□□□ 0.65
CRTC3-208ENST00000560098 POLIQ9UNA4 740 aa19.13■□□□□ 0.65
CRTC3-208ENST00000560098 POU2F2P09086 479 aa19.12■□□□□ 0.65
CRTC3-208ENST00000560098 IGFBP6P24592 240 aaPredicted RBP19.12■□□□□ 0.65
CRTC3-208ENST00000560098 UPP1Q16831 310 aa19.12■□□□□ 0.65
CRTC3-208ENST00000560098 UVSSAQ2YD98 709 aa19.12■□□□□ 0.65
CRTC3-208ENST00000560098 PARM1Q6UWI2 310 aa19.12■□□□□ 0.65
CRTC3-208ENST00000560098 IGSF22Q8N9C0 903 aa19.12■□□□□ 0.65
CRTC3-208ENST00000560098 SNX29Q8TEQ0 813 aa19.12■□□□□ 0.65
CRTC3-208ENST00000560098 FGF13Q92913 245 aa19.12■□□□□ 0.65
CRTC3-208ENST00000560098 FGF14Q92915 247 aa19.12■□□□□ 0.65
CRTC3-208ENST00000560098 RPP25Q9BUL9 199 aaKnown RBP19.12■□□□□ 0.65
CRTC3-208ENST00000560098 SH2B1Q9NRF2 756 aaPredicted RBP19.12■□□□□ 0.65
CRTC3-208ENST00000560098 PHLPP2Q6ZVD8 1323 aa19.11■□□□□ 0.65
CRTC3-208ENST00000560098 TRAPPC3O43617 180 aa19.11■□□□□ 0.65
CRTC3-208ENST00000560098 U2AF2P26368 475 aaKnown RBP eCLIP19.11■□□□□ 0.65
CRTC3-208ENST00000560098 NPTX2P47972 431 aa19.11■□□□□ 0.65
CRTC3-208ENST00000560098 PEX3P56589 373 aa19.11■□□□□ 0.65
CRTC3-208ENST00000560098 PTGDRQ13258 359 aa19.11■□□□□ 0.65
CRTC3-208ENST00000560098 CD300LGQ6UXG3 332 aa19.11■□□□□ 0.65
CRTC3-208ENST00000560098 RTL10Q7L3V2 364 aa19.11■□□□□ 0.65
CRTC3-208ENST00000560098 GOLGA2P5Q9HBQ8 144 aa19.11■□□□□ 0.65
CRTC3-208ENST00000560098 DNM3Q9UQ16 869 aa19.11■□□□□ 0.65
CRTC3-208ENST00000560098 SIT1Q9Y3P8 196 aa19.11■□□□□ 0.65
CRTC3-208ENST00000560098 BACE2Q9Y5Z0 518 aa19.11■□□□□ 0.65
CRTC3-208ENST00000560098 CDY1Q9Y6F8 540 aa19.11■□□□□ 0.65
CRTC3-208ENST00000560098 SMIM28A0A1B0GU29 152 aa19.1■□□□□ 0.65
CRTC3-208ENST00000560098 CCDC169A6NNP5 214 aa19.1■□□□□ 0.65
CRTC3-208ENST00000560098 GRM5P41594 1212 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms