RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 MAGEF1Q9HAY2 307 aa9.34□□□□□ -0.91
USP3-217ENST00000560070 GOLGA2P5Q9HBQ8 144 aa9.34□□□□□ -0.91
USP3-217ENST00000560070 EXOC1Q9NV70 894 aa9.34□□□□□ -0.91
USP3-217ENST00000560070 LMCD1Q9NZU5 365 aa9.34□□□□□ -0.91
USP3-217ENST00000560070 USP25Q9UHP3 1055 aa9.34□□□□□ -0.91
USP3-217ENST00000560070 AGO2Q9UKV8 859 aaKnown RBP9.34□□□□□ -0.91
USP3-217ENST00000560070 EXOC7Q9UPT5 735 aa9.34□□□□□ -0.91
USP3-217ENST00000560070 FAM237AA0A1B0GTK4 181 aa9.33□□□□□ -0.92
USP3-217ENST00000560070 PVALEFA0A1B0GWK0 134 aa9.33□□□□□ -0.92
USP3-217ENST00000560070 HIDE1A8MVS5 230 aa9.33□□□□□ -0.92
USP3-217ENST00000560070 CLIC2O15247 247 aa9.33□□□□□ -0.92
USP3-217ENST00000560070 OGTO15294 1046 aa9.33□□□□□ -0.92
USP3-217ENST00000560070 KLRC4O43908 158 aa9.33□□□□□ -0.92
USP3-217ENST00000560070 PIGRP01833 764 aa9.33□□□□□ -0.92
USP3-217ENST00000560070 CXCL8P10145 99 aa9.33□□□□□ -0.92
USP3-217ENST00000560070 POU3F3P20264 500 aaPredicted RBP9.33□□□□□ -0.92
USP3-217ENST00000560070 ADSSP30520 456 aa9.33□□□□□ -0.92
USP3-217ENST00000560070 PPM1AP35813 382 aa9.33□□□□□ -0.92
USP3-217ENST00000560070 GUCY2FP51841 1108 aa9.33□□□□□ -0.92
USP3-217ENST00000560070 GRIK3Q13003 919 aa9.33□□□□□ -0.92
USP3-217ENST00000560070 PNOCQ13519 176 aa9.33□□□□□ -0.92
USP3-217ENST00000560070 CSPP1Q1MSJ5 1256 aa9.33□□□□□ -0.92
USP3-217ENST00000560070 SLFN12LQ6IEE8 588 aa9.33□□□□□ -0.92
USP3-217ENST00000560070 LLGL2Q6P1M3 1020 aa9.33□□□□□ -0.92
USP3-217ENST00000560070 CEP57Q86XR8 500 aa9.33□□□□□ -0.92
USP3-217ENST00000560070 FMR1NBQ8N0W7 255 aaPredicted RBP9.33□□□□□ -0.92
USP3-217ENST00000560070 KIF12Q96FN5 646 aa9.33□□□□□ -0.92
USP3-217ENST00000560070 B3GALT6Q96L58 329 aa9.33□□□□□ -0.92
USP3-217ENST00000560070 TMEM175Q9BSA9 504 aa9.33□□□□□ -0.92
USP3-217ENST00000560070 LMAN2LQ9H0V9 348 aa9.33□□□□□ -0.92
USP3-217ENST00000560070 ST6GALNAC4Q9H4F1 302 aa9.33□□□□□ -0.92
USP3-217ENST00000560070 NSUN3Q9H649 340 aaKnown RBP9.33□□□□□ -0.92
USP3-217ENST00000560070 TLE6Q9H808 572 aa9.33□□□□□ -0.92
USP3-217ENST00000560070 TLR9Q9NR96 1032 aa9.33□□□□□ -0.92
USP3-217ENST00000560070 OLFML3Q9NRN5 406 aa9.33□□□□□ -0.92
USP3-217ENST00000560070 TOPORSQ9NS56 1045 aaPredicted RBP9.33□□□□□ -0.92
USP3-217ENST00000560070 MAPK8IP1Q9UQF2 711 aa9.33□□□□□ -0.92
USP3-217ENST00000560070 I3L4J1 428 aa9.32□□□□□ -0.92
USP3-217ENST00000560070 LINC01565O15544 149 aa9.32□□□□□ -0.92
USP3-217ENST00000560070 PPP1R37O75864 691 aa9.32□□□□□ -0.92
USP3-217ENST00000560070 ABCD1P33897 745 aa9.32□□□□□ -0.92
USP3-217ENST00000560070 HOXD13P35453 343 aa9.32□□□□□ -0.92
USP3-217ENST00000560070 CYP2J2P51589 502 aa9.32□□□□□ -0.92
USP3-217ENST00000560070 CLCNKBP51801 687 aa9.32□□□□□ -0.92
USP3-217ENST00000560070 RBM10P98175 930 aaKnown RBP9.32□□□□□ -0.92
USP3-217ENST00000560070 TFF2Q03403 129 aa9.32□□□□□ -0.92
USP3-217ENST00000560070 SOX4Q06945 474 aaPredicted RBP9.32□□□□□ -0.92
USP3-217ENST00000560070 DSC1Q08554 894 aa9.32□□□□□ -0.92
USP3-217ENST00000560070 HYAL1Q12794 435 aa9.32□□□□□ -0.92
USP3-217ENST00000560070 DPYDQ12882 1025 aa9.32□□□□□ -0.92
USP3-217ENST00000560070 STK4Q13043 487 aa9.32□□□□□ -0.92
USP3-217ENST00000560070 TUSC3Q13454 348 aa9.32□□□□□ -0.92
USP3-217ENST00000560070 SNW1Q13573 536 aaKnown RBP9.32□□□□□ -0.92
USP3-217ENST00000560070 HSP90AA2PQ14568 343 aaPredicted RBP9.32□□□□□ -0.92
USP3-217ENST00000560070 POSTNQ15063 836 aa9.32□□□□□ -0.92
USP3-217ENST00000560070 CLUL1Q15846 466 aa9.32□□□□□ -0.92
USP3-217ENST00000560070 ENOX2Q16206 610 aaKnown RBP9.32□□□□□ -0.92
USP3-217ENST00000560070 KIAA1841Q6NSI8 718 aa9.32□□□□□ -0.92
USP3-217ENST00000560070 ARMCX5Q6P1M9 558 aa9.32□□□□□ -0.92
USP3-217ENST00000560070 CNNM4Q6P4Q7 775 aa9.32□□□□□ -0.92
USP3-217ENST00000560070 ALKAL1Q6UXT8 129 aa9.32□□□□□ -0.92
USP3-217ENST00000560070 STXBP4Q6ZWJ1 553 aa9.32□□□□□ -0.92
USP3-217ENST00000560070 DDX53Q86TM3 631 aaKnown RBP9.32□□□□□ -0.92
USP3-217ENST00000560070 GLYCTKQ8IVS8 523 aa9.32□□□□□ -0.92
USP3-217ENST00000560070 ENGASEQ8NFI3 743 aa9.32□□□□□ -0.92
USP3-217ENST00000560070 ZNF507Q8TCN5 953 aa9.32□□□□□ -0.92
USP3-217ENST00000560070 CCDC47Q96A33 483 aaKnown RBP9.32□□□□□ -0.92
USP3-217ENST00000560070 HVCN1Q96D96 273 aa9.32□□□□□ -0.92
USP3-217ENST00000560070 SNX27Q96L92 541 aa9.32□□□□□ -0.92
USP3-217ENST00000560070 PPP1R10Q96QC0 940 aaKnown RBP9.32□□□□□ -0.92
USP3-217ENST00000560070 CBWD1Q9BRT8 395 aa9.32□□□□□ -0.92
USP3-217ENST00000560070 VN1R3Q9BXE9 311 aa9.32□□□□□ -0.92
USP3-217ENST00000560070 GPR62Q9BZJ7 368 aa9.32□□□□□ -0.92
USP3-217ENST00000560070 TMEM206Q9H813 350 aa9.32□□□□□ -0.92
USP3-217ENST00000560070 CLDND1Q9NY35 253 aa9.32□□□□□ -0.92
USP3-217ENST00000560070 FARP1Q9Y4F1 1045 aaPredicted RBP9.32□□□□□ -0.92
USP3-217ENST00000560070 LAMA3Q16787 3333 aa9.31□□□□□ -0.92
USP3-217ENST00000560070 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.31□□□□□ -0.92
USP3-217ENST00000560070 H3BQ06 376 aaPredicted RBP9.31□□□□□ -0.92
USP3-217ENST00000560070 FSCN2O14926 492 aa9.31□□□□□ -0.92
USP3-217ENST00000560070 INPPL1O15357 1258 aa9.31□□□□□ -0.92
USP3-217ENST00000560070 B3GAT3O94766 335 aa9.31□□□□□ -0.92
USP3-217ENST00000560070 SCP2P22307 547 aa9.31□□□□□ -0.92
USP3-217ENST00000560070 KLRC2P26717 231 aa9.31□□□□□ -0.92
USP3-217ENST00000560070 BRCC3P46736 316 aa9.31□□□□□ -0.92
USP3-217ENST00000560070 UBE3AQ05086 875 aa9.31□□□□□ -0.92
USP3-217ENST00000560070 FAM160A1Q05DH4 1040 aa9.31□□□□□ -0.92
USP3-217ENST00000560070 PPP2R3AQ06190 1150 aa9.31□□□□□ -0.92
USP3-217ENST00000560070 ALCAMQ13740 583 aa9.31□□□□□ -0.92
USP3-217ENST00000560070 BMS1Q14692 1282 aaKnown RBP9.31□□□□□ -0.92
USP3-217ENST00000560070 NAB2Q15742 525 aa9.31□□□□□ -0.92
USP3-217ENST00000560070 TIGD5Q53EQ6 642 aa9.31□□□□□ -0.92
USP3-217ENST00000560070 XKR4Q5GH76 650 aa9.31□□□□□ -0.92
USP3-217ENST00000560070 JADE1Q6IE81 842 aa9.31□□□□□ -0.92
USP3-217ENST00000560070 KANK3Q6NY19 840 aa9.31□□□□□ -0.92
USP3-217ENST00000560070 DCLRE1AQ6PJP8 1040 aa9.31□□□□□ -0.92
USP3-217ENST00000560070 CRELD2Q6UXH1 353 aaPredicted RBP9.31□□□□□ -0.92
USP3-217ENST00000560070 EPM2AIP1Q7L775 607 aaPredicted RBP9.31□□□□□ -0.92
USP3-217ENST00000560070 MRPL43Q8N983 215 aaKnown RBP9.31□□□□□ -0.92
USP3-217ENST00000560070 SCFD1Q8WVM8 642 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms