RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 DNAJB1P25685 340 aa18.37■□□□□ 0.53
RPL28-209ENST00000560055 MATR3P43243 847 aaKnown RBP eCLIP18.37■□□□□ 0.53
RPL28-209ENST00000560055 SLC11A1P49279 550 aa18.37■□□□□ 0.53
RPL28-209ENST00000560055 ALDH7A1P49419 539 aaKnown RBP18.37■□□□□ 0.53
RPL28-209ENST00000560055 YARSP54577 528 aaKnown RBP18.37■□□□□ 0.53
RPL28-209ENST00000560055 PSMD2Q13200 908 aa18.37■□□□□ 0.53
RPL28-209ENST00000560055 CAMK1Q14012 370 aa18.37■□□□□ 0.53
RPL28-209ENST00000560055 CCDC85BQ15834 202 aaPredicted RBP18.37■□□□□ 0.53
RPL28-209ENST00000560055 KYAT1Q16773 422 aa18.37■□□□□ 0.53
RPL28-209ENST00000560055 SLC10A6Q3KNW5 377 aa18.37■□□□□ 0.53
RPL28-209ENST00000560055 SEZ6Q53EL9 994 aa18.37■□□□□ 0.53
RPL28-209ENST00000560055 ZBTB41Q5SVQ8 909 aa18.37■□□□□ 0.53
RPL28-209ENST00000560055 TMEM173Q86WV6 379 aaPredicted RBP18.37■□□□□ 0.53
RPL28-209ENST00000560055 MSTO1Q9BUK6 570 aa18.37■□□□□ 0.53
RPL28-209ENST00000560055 GBP3Q9H0R5 595 aa18.37■□□□□ 0.53
RPL28-209ENST00000560055 ALG13Q9NP73 1137 aaKnown RBP18.37■□□□□ 0.53
RPL28-209ENST00000560055 SPG21Q9NZD8 308 aa18.37■□□□□ 0.53
RPL28-209ENST00000560055 CNTN3Q9P232 1028 aa18.37■□□□□ 0.53
RPL28-209ENST00000560055 TTC26A0AVF1 554 aa18.36■□□□□ 0.53
RPL28-209ENST00000560055 PRPF40AO75400 957 aaKnown RBP18.36■□□□□ 0.53
RPL28-209ENST00000560055 ADRB2P07550 413 aa18.36■□□□□ 0.53
RPL28-209ENST00000560055 KCNE1P15382 129 aa18.36■□□□□ 0.53
RPL28-209ENST00000560055 GARTP22102 1010 aa18.36■□□□□ 0.53
RPL28-209ENST00000560055 TNFSF9P41273 254 aa18.36■□□□□ 0.53
RPL28-209ENST00000560055 UBE3AQ05086 875 aa18.36■□□□□ 0.53
RPL28-209ENST00000560055 PNOCQ13519 176 aa18.36■□□□□ 0.53
RPL28-209ENST00000560055 KCNB1Q14721 858 aa18.36■□□□□ 0.53
RPL28-209ENST00000560055 SYCP3Q8IZU3 236 aa18.36■□□□□ 0.53
RPL28-209ENST00000560055 SPATA20Q8TB22 786 aa18.36■□□□□ 0.53
RPL28-209ENST00000560055 POMGNT1Q8WZA1 660 aa18.36■□□□□ 0.53
RPL28-209ENST00000560055 MRPL38Q96DV4 380 aaKnown RBP18.36■□□□□ 0.53
RPL28-209ENST00000560055 ZMAT2Q96NC0 199 aaKnown RBP18.36■□□□□ 0.53
RPL28-209ENST00000560055 FAM193BQ96PV7 902 aaPredicted RBP18.36■□□□□ 0.53
RPL28-209ENST00000560055 PPP1R10Q96QC0 940 aaKnown RBP18.36■□□□□ 0.53
RPL28-209ENST00000560055 LMAN2LQ9H0V9 348 aa18.36■□□□□ 0.53
RPL28-209ENST00000560055 CPSF3Q9UKF6 684 aaKnown RBP18.36■□□□□ 0.53
RPL28-209ENST00000560055 AGO2Q9UKV8 859 aaKnown RBP18.36■□□□□ 0.53
RPL28-209ENST00000560055 LZTS1Q9Y250 596 aa18.36■□□□□ 0.53
RPL28-209ENST00000560055 SMIM28A0A1B0GU29 152 aa18.35■□□□□ 0.53
RPL28-209ENST00000560055 NT5C1B-RDH14C9J2C7 533 aa18.35■□□□□ 0.53
RPL28-209ENST00000560055 NRP1O14786 923 aa18.35■□□□□ 0.53
RPL28-209ENST00000560055 TGFB1I1O43294 461 aa18.35■□□□□ 0.53
RPL28-209ENST00000560055 KINO60870 393 aaKnown RBP18.35■□□□□ 0.53
RPL28-209ENST00000560055 THP07101 528 aa18.35■□□□□ 0.53
RPL28-209ENST00000560055 CXCL8P10145 99 aa18.35■□□□□ 0.53
RPL28-209ENST00000560055 POU5F1Q01860 360 aaKnown RBP18.35■□□□□ 0.53
RPL28-209ENST00000560055 ENOX2Q16206 610 aaKnown RBP18.35■□□□□ 0.53
RPL28-209ENST00000560055 GLRA4Q5JXX5 417 aa18.35■□□□□ 0.53
RPL28-209ENST00000560055 BCL7CQ8WUZ0 217 aaPredicted RBP18.35■□□□□ 0.53
RPL28-209ENST00000560055 POF1BQ8WVV4 589 aa18.35■□□□□ 0.53
RPL28-209ENST00000560055 IGSF21Q96ID5 467 aa18.35■□□□□ 0.53
RPL28-209ENST00000560055 CBWD1Q9BRT8 395 aa18.35■□□□□ 0.53
RPL28-209ENST00000560055 PLEKHA5Q9HAU0 1116 aa18.35■□□□□ 0.53
RPL28-209ENST00000560055 MARCH5Q9NX47 278 aa18.35■□□□□ 0.53
RPL28-209ENST00000560055 TTC28Q96AY4 2481 aa18.35■□□□□ 0.53
RPL28-209ENST00000560055 TDRD15B5MCY1 1934 aaKnown RBP18.35■□□□□ 0.53
RPL28-209ENST00000560055 CITO14578 2027 aa18.34■□□□□ 0.53
RPL28-209ENST00000560055 TRIP11Q15643 1979 aa18.34■□□□□ 0.53
RPL28-209ENST00000560055 ALDH2P05091 517 aa18.34■□□□□ 0.53
RPL28-209ENST00000560055 SNRPFP62306 86 aaKnown RBP18.34■□□□□ 0.53
RPL28-209ENST00000560055 TUSC3Q13454 348 aa18.34■□□□□ 0.53
RPL28-209ENST00000560055 PTPROQ16827 1216 aa18.34■□□□□ 0.53
RPL28-209ENST00000560055 CRELD2Q6UXH1 353 aaPredicted RBP18.34■□□□□ 0.53
RPL28-209ENST00000560055 FAN1Q9Y2M0 1017 aa18.34■□□□□ 0.53
RPL28-209ENST00000560055 PLXNA4Q9HCM2 1894 aa18.34■□□□□ 0.53
RPL28-209ENST00000560055 EFEMP2O95967 443 aa18.33■□□□□ 0.52
RPL28-209ENST00000560055 ACOT2P49753 483 aa18.33■□□□□ 0.52
RPL28-209ENST00000560055 KNOP1Q1ED39 458 aaKnown RBP18.33■□□□□ 0.52
RPL28-209ENST00000560055 NELFCDQ8IXH7 590 aa18.33■□□□□ 0.52
RPL28-209ENST00000560055 ZSWIM2Q8NEG5 633 aa18.33■□□□□ 0.52
RPL28-209ENST00000560055 CCDC47Q96A33 483 aaKnown RBP18.33■□□□□ 0.52
RPL28-209ENST00000560055 TMEM169Q96HH4 297 aa18.33■□□□□ 0.52
RPL28-209ENST00000560055 GBP4Q96PP9 640 aa18.33■□□□□ 0.52
RPL28-209ENST00000560055 PAAF1Q9BRP4 392 aa18.33■□□□□ 0.52
RPL28-209ENST00000560055 VN1R3Q9BXE9 311 aa18.33■□□□□ 0.52
RPL28-209ENST00000560055 RPF1Q9H9Y2 349 aaKnown RBP18.33■□□□□ 0.52
RPL28-209ENST00000560055 AGPAT3Q9NRZ7 376 aa18.33■□□□□ 0.52
RPL28-209ENST00000560055 LMBRD1Q9NUN5 540 aa18.33■□□□□ 0.52
RPL28-209ENST00000560055 CACNG4Q9UBN1 327 aa18.33■□□□□ 0.52
RPL28-209ENST00000560055 HOOK1Q9UJC3 728 aaKnown RBP18.33■□□□□ 0.52
RPL28-209ENST00000560055 ATG2AQ2TAZ0 1938 aa18.32■□□□□ 0.52
RPL28-209ENST00000560055 LACTBL1A8MY62 500 aa18.32■□□□□ 0.52
RPL28-209ENST00000560055 F8W810 466 aa18.32■□□□□ 0.52
RPL28-209ENST00000560055 IRS1P35568 1242 aa18.32■□□□□ 0.52
RPL28-209ENST00000560055 OR1G1P47890 313 aa18.32■□□□□ 0.52
RPL28-209ENST00000560055 KRT17Q04695 432 aa18.32■□□□□ 0.52
RPL28-209ENST00000560055 SOX4Q06945 474 aaPredicted RBP18.32■□□□□ 0.52
RPL28-209ENST00000560055 ARMCX5Q6P1M9 558 aa18.32■□□□□ 0.52
RPL28-209ENST00000560055 C12orf56Q8IXR9 622 aa18.32■□□□□ 0.52
RPL28-209ENST00000560055 MICALL1Q8N3F8 863 aa18.32■□□□□ 0.52
RPL28-209ENST00000560055 ERCC4Q92889 916 aaPredicted RBP18.32■□□□□ 0.52
RPL28-209ENST00000560055 GSDMAQ96QA5 445 aa18.32■□□□□ 0.52
RPL28-209ENST00000560055 TLR9Q9NR96 1032 aa18.32■□□□□ 0.52
RPL28-209ENST00000560055 SLC38A7Q9NVC3 462 aa18.32■□□□□ 0.52
RPL28-209ENST00000560055 PRG3Q9Y2Y8 225 aaPredicted RBP18.32■□□□□ 0.52
RPL28-209ENST00000560055 PCDHA5Q9Y5H7 936 aa18.32■□□□□ 0.52
RPL28-209ENST00000560055 CASTOR2A6NHX0 329 aa18.31■□□□□ 0.52
RPL28-209ENST00000560055 FSCN2O14926 492 aa18.31■□□□□ 0.52
RPL28-209ENST00000560055 KIAA0391O15091 583 aaKnown RBP18.31■□□□□ 0.52
RPL28-209ENST00000560055 EXTL3O43909 919 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms