RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 PPP2R3AQ06190 1150 aa11.32□□□□□ -0.6
TPM1-221ENST00000559831 KCNH2Q12809 1159 aa11.32□□□□□ -0.6
TPM1-221ENST00000559831 PLEKHG4Q58EX7 1191 aa11.32□□□□□ -0.6
TPM1-221ENST00000559831 FKBP15Q5T1M5 1219 aa11.32□□□□□ -0.6
TPM1-221ENST00000559831 HACE1Q8IYU2 909 aa11.32□□□□□ -0.6
TPM1-221ENST00000559831 RNF169Q8NCN4 708 aa11.32□□□□□ -0.6
TPM1-221ENST00000559831 SMG8Q8ND04 991 aaKnown RBP11.32□□□□□ -0.6
TPM1-221ENST00000559831 TMC2Q8TDI7 906 aa11.32□□□□□ -0.6
TPM1-221ENST00000559831 PARD3BQ8TEW8 1205 aa11.32□□□□□ -0.6
TPM1-221ENST00000559831 LINC01599Q8WXQ3 324 aa11.32□□□□□ -0.6
TPM1-221ENST00000559831 APBB2Q92870 758 aa11.32□□□□□ -0.6
TPM1-221ENST00000559831 SLC35C1Q96A29 364 aa11.32□□□□□ -0.6
TPM1-221ENST00000559831 FAM84AQ96KN4 292 aa11.32□□□□□ -0.6
TPM1-221ENST00000559831 CGRRF1Q99675 332 aa11.32□□□□□ -0.6
TPM1-221ENST00000559831 HTATIP2Q9BUP3 242 aa11.32□□□□□ -0.6
TPM1-221ENST00000559831 FTHL17Q9BXU8 183 aa11.32□□□□□ -0.6
TPM1-221ENST00000559831 RNF39Q9H2S5 420 aa11.32□□□□□ -0.6
TPM1-221ENST00000559831 RTN4Q9NQC3 1192 aaKnown RBP11.32□□□□□ -0.6
TPM1-221ENST00000559831 KLK14Q9P0G3 267 aa11.32□□□□□ -0.6
TPM1-221ENST00000559831 LRRC10BA6NIK2 292 aa11.31□□□□□ -0.6
TPM1-221ENST00000559831 LACTBL1A8MY62 500 aa11.31□□□□□ -0.6
TPM1-221ENST00000559831 STX10O60499 249 aa11.31□□□□□ -0.6
TPM1-221ENST00000559831 CXCL10P02778 98 aa11.31□□□□□ -0.6
TPM1-221ENST00000559831 GCLMP48507 274 aa11.31□□□□□ -0.6
TPM1-221ENST00000559831 MYL7Q01449 175 aa11.31□□□□□ -0.6
TPM1-221ENST00000559831 NR1I3Q14994 352 aa11.31□□□□□ -0.6
TPM1-221ENST00000559831 SURF1Q15526 300 aa11.31□□□□□ -0.6
TPM1-221ENST00000559831 TCTN1Q2MV58 587 aa11.31□□□□□ -0.6
TPM1-221ENST00000559831 SLC10A6Q3KNW5 377 aa11.31□□□□□ -0.6
TPM1-221ENST00000559831 C1orf220Q5T0J3 134 aa11.31□□□□□ -0.6
TPM1-221ENST00000559831 DRC7Q8IY82 874 aa11.31□□□□□ -0.6
TPM1-221ENST00000559831 TMEM199Q8N511 208 aa11.31□□□□□ -0.6
TPM1-221ENST00000559831 LPPQ93052 612 aa11.31□□□□□ -0.6
TPM1-221ENST00000559831 PCMTD1Q96MG8 357 aaPredicted RBP11.31□□□□□ -0.6
TPM1-221ENST00000559831 INTS13Q9NVM9 706 aa11.31□□□□□ -0.6
TPM1-221ENST00000559831 MEFVO15553 781 aaPredicted RBP11.3□□□□□ -0.6
TPM1-221ENST00000559831 EVI5O60447 810 aa11.3□□□□□ -0.6
TPM1-221ENST00000559831 N4BP1O75113 896 aaKnown RBP11.3□□□□□ -0.6
TPM1-221ENST00000559831 CLSTN1O94985 981 aa11.3□□□□□ -0.6
TPM1-221ENST00000559831 NFICP08651 508 aa11.3□□□□□ -0.6
TPM1-221ENST00000559831 SKIP12755 728 aa11.3□□□□□ -0.6
TPM1-221ENST00000559831 CSF2RAP15509 400 aa11.3□□□□□ -0.6
TPM1-221ENST00000559831 FMO5P49326 533 aa11.3□□□□□ -0.6
TPM1-221ENST00000559831 MXI1P50539 228 aa11.3□□□□□ -0.6
TPM1-221ENST00000559831 TFAMQ00059 246 aaKnown RBP11.3□□□□□ -0.6
TPM1-221ENST00000559831 PPP3CAQ08209 521 aa11.3□□□□□ -0.6
TPM1-221ENST00000559831 BIRC3Q13489 604 aa11.3□□□□□ -0.6
TPM1-221ENST00000559831 CBWD6Q4V339 395 aa11.3□□□□□ -0.6
TPM1-221ENST00000559831 CBWD3Q5JTY5 395 aa11.3□□□□□ -0.6
TPM1-221ENST00000559831 CBWD5Q5RIA9 395 aa11.3□□□□□ -0.6
TPM1-221ENST00000559831 JADE1Q6IE81 842 aa11.3□□□□□ -0.6
TPM1-221ENST00000559831 MFSD5Q6N075 450 aa11.3□□□□□ -0.6
TPM1-221ENST00000559831 CNKSR3Q6P9H4 555 aa11.3□□□□□ -0.6
TPM1-221ENST00000559831 RTN4RL1Q86UN2 441 aaPredicted RBP11.3□□□□□ -0.6
TPM1-221ENST00000559831 ECHDC2Q86YB7 292 aa11.3□□□□□ -0.6
TPM1-221ENST00000559831 WDR49Q8IV35 697 aa11.3□□□□□ -0.6
TPM1-221ENST00000559831 DPF3Q92784 378 aa11.3□□□□□ -0.6
TPM1-221ENST00000559831 PGBD4Q96DM1 585 aa11.3□□□□□ -0.6
TPM1-221ENST00000559831 KIF12Q96FN5 646 aa11.3□□□□□ -0.6
TPM1-221ENST00000559831 SNX27Q96L92 541 aa11.3□□□□□ -0.6
TPM1-221ENST00000559831 CRACR2AQ9BSW2 395 aa11.3□□□□□ -0.6
TPM1-221ENST00000559831 TSPYL2Q9H2G4 693 aaPredicted RBP11.3□□□□□ -0.6
TPM1-221ENST00000559831 RGS18Q9NS28 235 aa11.3□□□□□ -0.6
TPM1-221ENST00000559831 C1orf112Q9NSG2 853 aa11.3□□□□□ -0.6
TPM1-221ENST00000559831 RNF19AQ9NV58 838 aa11.3□□□□□ -0.6
TPM1-221ENST00000559831 PTPRJQ12913 1337 aa11.3□□□□□ -0.6
TPM1-221ENST00000559831 TTC3P53804 2025 aa11.3□□□□□ -0.6
TPM1-221ENST00000559831 DNAH12Q6ZR08 3092 aa11.29□□□□□ -0.6
TPM1-221ENST00000559831 A0A0U1RQF3 1178 aa11.29□□□□□ -0.6
TPM1-221ENST00000559831 TTC26A0AVF1 554 aa11.29□□□□□ -0.6
TPM1-221ENST00000559831 MEIS3P2A8K0S8 358 aa11.29□□□□□ -0.6
TPM1-221ENST00000559831 C9IYK1 514 aa11.29□□□□□ -0.6
TPM1-221ENST00000559831 ENPP3O14638 875 aa11.29□□□□□ -0.6
TPM1-221ENST00000559831 ZNF623O75123 536 aa11.29□□□□□ -0.6
TPM1-221ENST00000559831 PHACTR2O75167 634 aa11.29□□□□□ -0.6
TPM1-221ENST00000559831 TNNC2P02585 160 aa11.29□□□□□ -0.6
TPM1-221ENST00000559831 TMEM191BP0C7N4 346 aa11.29□□□□□ -0.6
TPM1-221ENST00000559831 ACRP10323 421 aa11.29□□□□□ -0.6
TPM1-221ENST00000559831 SYN1P17600 705 aa11.29□□□□□ -0.6
TPM1-221ENST00000559831 MLH1P40692 756 aa11.29□□□□□ -0.6
TPM1-221ENST00000559831 KLK7P49862 253 aa11.29□□□□□ -0.6
TPM1-221ENST00000559831 POU5F1Q01860 360 aaKnown RBP11.29□□□□□ -0.6
TPM1-221ENST00000559831 ENPEPQ07075 957 aa11.29□□□□□ -0.6
TPM1-221ENST00000559831 TMEM132DQ14C87 1099 aa11.29□□□□□ -0.6
TPM1-221ENST00000559831 SYCP1Q15431 976 aa11.29□□□□□ -0.6
TPM1-221ENST00000559831 GLRA4Q5JXX5 417 aa11.29□□□□□ -0.6
TPM1-221ENST00000559831 SLC24A5Q71RS6 500 aa11.29□□□□□ -0.6
TPM1-221ENST00000559831 TMC6Q7Z403 805 aa11.29□□□□□ -0.6
TPM1-221ENST00000559831 MRPL10Q7Z7H8 261 aaKnown RBP11.29□□□□□ -0.6
TPM1-221ENST00000559831 CD302Q8IX05 232 aa11.29□□□□□ -0.6
TPM1-221ENST00000559831 EFCAB13Q8IY85 973 aa11.29□□□□□ -0.6
TPM1-221ENST00000559831 RPUSD2Q8IZ73 545 aaKnown RBP11.29□□□□□ -0.6
TPM1-221ENST00000559831 SPC24Q8NBT2 197 aa11.29□□□□□ -0.6
TPM1-221ENST00000559831 OR5B17Q8NGF7 314 aa11.29□□□□□ -0.6
TPM1-221ENST00000559831 ZNF516Q92618 1163 aa11.29□□□□□ -0.6
TPM1-221ENST00000559831 BADQ92934 168 aa11.29□□□□□ -0.6
TPM1-221ENST00000559831 MRFAP1L1Q96HT8 127 aa11.29□□□□□ -0.6
TPM1-221ENST00000559831 ANKRD36BP1Q96IX9 119 aa11.29□□□□□ -0.6
TPM1-221ENST00000559831 RPS6KC1Q96S38 1066 aa11.29□□□□□ -0.6
TPM1-221ENST00000559831 TRAIPQ9BWF2 469 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms