RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 TDGQ13569 410 aa20.71■□□□□ 0.91
CDC42BPB-206ENST00000559790 GLRA4Q5JXX5 417 aa20.71■□□□□ 0.91
CDC42BPB-206ENST00000559790 ASTLQ6HA08 431 aaPredicted RBP20.71■□□□□ 0.91
CDC42BPB-206ENST00000559790 CYP26C1Q6V0L0 522 aa20.71■□□□□ 0.91
CDC42BPB-206ENST00000559790 DEPTORQ8TB45 409 aa20.71■□□□□ 0.91
CDC42BPB-206ENST00000559790 ACSF2Q96CM8 615 aaPredicted RBP20.71■□□□□ 0.91
CDC42BPB-206ENST00000559790 PLEKHA4Q9H4M7 779 aa20.71■□□□□ 0.91
CDC42BPB-206ENST00000559790 PTPRHQ9HD43 1115 aa20.71■□□□□ 0.91
CDC42BPB-206ENST00000559790 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.71■□□□□ 0.91
CDC42BPB-206ENST00000559790 ZDHHC7Q9NXF8 308 aa20.71■□□□□ 0.91
CDC42BPB-206ENST00000559790 ARHGAP28Q9P2N2 729 aa20.71■□□□□ 0.91
CDC42BPB-206ENST00000559790 KIAA1024Q9UPX6 916 aa20.71■□□□□ 0.91
CDC42BPB-206ENST00000559790 PTPRZ1P23471 2315 aaPredicted RBP20.71■□□□□ 0.91
CDC42BPB-206ENST00000559790 E9PMD0 336 aa20.7■□□□□ 0.9
CDC42BPB-206ENST00000559790 H0Y858 1186 aa20.7■□□□□ 0.9
CDC42BPB-206ENST00000559790 TMEM189-UBE2V1I3L0A0 370 aa20.7■□□□□ 0.9
CDC42BPB-206ENST00000559790 PI15O43692 258 aa20.7■□□□□ 0.9
CDC42BPB-206ENST00000559790 ZMYND10O75800 440 aa20.7■□□□□ 0.9
CDC42BPB-206ENST00000559790 CDC25AP30304 524 aa20.7■□□□□ 0.9
CDC42BPB-206ENST00000559790 RSPO2Q6UXX9 243 aaPredicted RBP20.7■□□□□ 0.9
CDC42BPB-206ENST00000559790 SNX29Q8TEQ0 813 aa20.7■□□□□ 0.9
CDC42BPB-206ENST00000559790 PRKD2Q9BZL6 878 aa20.7■□□□□ 0.9
CDC42BPB-206ENST00000559790 CDT1Q9H211 546 aa20.7■□□□□ 0.9
CDC42BPB-206ENST00000559790 GOLGA2P5Q9HBQ8 144 aa20.7■□□□□ 0.9
CDC42BPB-206ENST00000559790 LRWD1Q9UFC0 647 aa20.7■□□□□ 0.9
CDC42BPB-206ENST00000559790 GDAQ9Y2T3 454 aa20.7■□□□□ 0.9
CDC42BPB-206ENST00000559790 PHLPP2Q6ZVD8 1323 aa20.7■□□□□ 0.9
CDC42BPB-206ENST00000559790 KRBA1A5PL33 1030 aa20.69■□□□□ 0.9
CDC42BPB-206ENST00000559790 SPDYE4A6NLX3 237 aa20.69■□□□□ 0.9
CDC42BPB-206ENST00000559790 THP07101 528 aa20.69■□□□□ 0.9
CDC42BPB-206ENST00000559790 LIG1P18858 919 aa20.69■□□□□ 0.9
CDC42BPB-206ENST00000559790 NPTX2P47972 431 aa20.69■□□□□ 0.9
CDC42BPB-206ENST00000559790 NUBP1P53384 320 aa20.69■□□□□ 0.9
CDC42BPB-206ENST00000559790 PDIA5Q14554 519 aa20.69■□□□□ 0.9
CDC42BPB-206ENST00000559790 PPP2R5AQ15172 486 aa20.69■□□□□ 0.9
CDC42BPB-206ENST00000559790 DCAF4L1Q3SXM0 396 aa20.69■□□□□ 0.9
CDC42BPB-206ENST00000559790 XKR4Q5GH76 650 aa20.69■□□□□ 0.9
CDC42BPB-206ENST00000559790 ATF7IP2Q5U623 682 aa20.69■□□□□ 0.9
CDC42BPB-206ENST00000559790 FAM171A1Q5VUB5 890 aa20.69■□□□□ 0.9
CDC42BPB-206ENST00000559790 KIFAP3Q92845 792 aa20.69■□□□□ 0.9
CDC42BPB-206ENST00000559790 TTPALQ9BTX7 342 aa20.69■□□□□ 0.9
CDC42BPB-206ENST00000559790 TNFSF13BQ9Y275 285 aa20.69■□□□□ 0.9
CDC42BPB-206ENST00000559790 DCHS1Q96JQ0 3298 aa20.68■□□□□ 0.9
CDC42BPB-206ENST00000559790 ANHXE9PGG2 379 aa20.68■□□□□ 0.9
CDC42BPB-206ENST00000559790 NR1I2O75469 434 aa20.68■□□□□ 0.9
CDC42BPB-206ENST00000559790 TADA2AO75478 443 aa20.68■□□□□ 0.9
CDC42BPB-206ENST00000559790 FGFR3P22607 806 aa20.68■□□□□ 0.9
CDC42BPB-206ENST00000559790 PROZP22891 400 aa20.68■□□□□ 0.9
CDC42BPB-206ENST00000559790 NTHL1P78549 312 aa20.68■□□□□ 0.9
CDC42BPB-206ENST00000559790 HTR4Q13639 388 aa20.68■□□□□ 0.9
CDC42BPB-206ENST00000559790 PSMD5Q16401 504 aa20.68■□□□□ 0.9
CDC42BPB-206ENST00000559790 ALKAL1Q6UXT8 129 aa20.68■□□□□ 0.9
CDC42BPB-206ENST00000559790 C1orf186Q6ZWK4 172 aa20.68■□□□□ 0.9
CDC42BPB-206ENST00000559790 LRRC15Q8TF66 581 aa20.68■□□□□ 0.9
CDC42BPB-206ENST00000559790 ZMAT2Q96NC0 199 aaKnown RBP20.68■□□□□ 0.9
CDC42BPB-206ENST00000559790 IGSF9Q9P2J2 1179 aa20.68■□□□□ 0.9
CDC42BPB-206ENST00000559790 SCN1AP35498 2009 aa20.68■□□□□ 0.9
CDC42BPB-206ENST00000559790 PROB1E7EW31 1015 aa20.67■□□□□ 0.9
CDC42BPB-206ENST00000559790 EIF5BO60841 1220 aaKnown RBP20.67■□□□□ 0.9
CDC42BPB-206ENST00000559790 HIP1RO75146 1068 aa20.67■□□□□ 0.9
CDC42BPB-206ENST00000559790 AOC1P19801 751 aa20.67■□□□□ 0.9
CDC42BPB-206ENST00000559790 GBP2P32456 591 aaPredicted RBP20.67■□□□□ 0.9
CDC42BPB-206ENST00000559790 PRPHP41219 470 aa20.67■□□□□ 0.9
CDC42BPB-206ENST00000559790 CLCN5P51795 746 aa20.67■□□□□ 0.9
CDC42BPB-206ENST00000559790 EFNA5P52803 228 aa20.67■□□□□ 0.9
CDC42BPB-206ENST00000559790 POTEHQ6S545 545 aa20.67■□□□□ 0.9
CDC42BPB-206ENST00000559790 ST13P5Q8NFI4 369 aaPredicted RBP20.67■□□□□ 0.9
CDC42BPB-206ENST00000559790 DDX27Q96GQ7 796 aaKnown RBP20.67■□□□□ 0.9
CDC42BPB-206ENST00000559790 PNMA5Q96PV4 448 aa20.67■□□□□ 0.9
CDC42BPB-206ENST00000559790 ACO2Q99798 780 aaKnown RBP20.67■□□□□ 0.9
CDC42BPB-206ENST00000559790 MTRRQ9UBK8 725 aa20.67■□□□□ 0.9
CDC42BPB-206ENST00000559790 NOL7Q9UMY1 257 aaKnown RBP20.67■□□□□ 0.9
CDC42BPB-206ENST00000559790 OTOGLQ3ZCN5 2332 aa20.66■□□□□ 0.9
CDC42BPB-206ENST00000559790 LAMP2P13473 410 aa20.66■□□□□ 0.9
CDC42BPB-206ENST00000559790 GRM5P41594 1212 aa20.66■□□□□ 0.9
CDC42BPB-206ENST00000559790 CLCNKBP51801 687 aa20.66■□□□□ 0.9
CDC42BPB-206ENST00000559790 PEX3P56589 373 aa20.66■□□□□ 0.9
CDC42BPB-206ENST00000559790 ATP2C1P98194 919 aaPredicted RBP20.66■□□□□ 0.9
CDC42BPB-206ENST00000559790 CREMQ03060 361 aa20.66■□□□□ 0.9
CDC42BPB-206ENST00000559790 UPP1Q16831 310 aa20.66■□□□□ 0.9
CDC42BPB-206ENST00000559790 HYIQ5T013 277 aa20.66■□□□□ 0.9
CDC42BPB-206ENST00000559790 RINT1Q6NUQ1 792 aa20.66■□□□□ 0.9
CDC42BPB-206ENST00000559790 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.66■□□□□ 0.9
CDC42BPB-206ENST00000559790 GET4Q7L5D6 327 aaPredicted RBP20.66■□□□□ 0.9
CDC42BPB-206ENST00000559790 TMEM130Q8N3G9 435 aa20.66■□□□□ 0.9
CDC42BPB-206ENST00000559790 SLC44A3Q8N4M1 653 aa20.66■□□□□ 0.9
CDC42BPB-206ENST00000559790 FAM184AQ8NB25 1140 aa20.66■□□□□ 0.9
CDC42BPB-206ENST00000559790 ADPGKQ9BRR6 497 aa20.66■□□□□ 0.9
CDC42BPB-206ENST00000559790 TCHHQ07283 1943 aa20.66■□□□□ 0.9
CDC42BPB-206ENST00000559790 TICRRQ7Z2Z1 1910 aa20.66■□□□□ 0.9
CDC42BPB-206ENST00000559790 FRYLO94915 3013 aa20.66■□□□□ 0.9
CDC42BPB-206ENST00000559790 DMXL1Q9Y485 3027 aa20.66■□□□□ 0.9
CDC42BPB-206ENST00000559790 DENND4CQ5VZ89 1909 aa20.65■□□□□ 0.9
CDC42BPB-206ENST00000559790 I3L4J1 428 aa20.65■□□□□ 0.9
CDC42BPB-206ENST00000559790 TKTP29401 623 aaKnown RBP20.65■□□□□ 0.9
CDC42BPB-206ENST00000559790 SIX5Q8N196 739 aa20.65■□□□□ 0.9
CDC42BPB-206ENST00000559790 SNX27Q96L92 541 aa20.65■□□□□ 0.9
CDC42BPB-206ENST00000559790 IFT74Q96LB3 600 aa20.65■□□□□ 0.9
CDC42BPB-206ENST00000559790 RPP25Q9BUL9 199 aaKnown RBP20.65■□□□□ 0.9
CDC42BPB-206ENST00000559790 TARS2Q9BW92 718 aaKnown RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms